Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0192500-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:4658961:4659953:1 gene:Os11g0192500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectinesterase family protein. (Os11t0192500-00)
Sequence	ATGGCCGGCTCTTCCTCTCTTGCATCGCCTCGCTCACTACAGCTACCACTCCTCCTCCTT TTCCTCCTCGTTGCCGCTGCGATAGGCAGCTACGACCCCAAGGCGTTCTGTTCCAAGACG ACAGACGTAGCATCGTGCCTTAAGGTGTTCCCGACACTCCCAGACATCGTCACCAAGGCG CAGGACAACCAAGAGTTGTACAAACGGCTGGTCCGCTACTGCTCATTCAAGACCTACGAG GCCACGTCGCTCGCGGAATCCATGATTGCCACCACCACCGCCGCCAACCCCGCGAATATC GCCACCTTCTTCGAGCAGTGGAAAGGGGACGAGGCGATAACGACAAAAACACCTCCAGGC AAGTGCCTCTTGAGCTGCAACAAGACCATCGGCGAAGTTAACGCCATCCTAACCTGCGGA CACACCTACATGGAAGACAGGCCCCCCATCATCCACCAGAACCTCACCGTCTTGTTCCAT GGCGGCCACCCGCCGTCACTCTGCAAGAGTGGATGCCTTGACGGCTCGTCGTCAGAGGGT GAGGTCCTCCTCGCCACCAAGTTCAACTATATATGGAGCTTGTTGGATCTCATGGAAGCT GTCCTACCGGAATATCTTTCTGAGACTGGGACTGCGACGACGACGGTACCATCTCCCGAC GTCGCTGCGGCGGCGGCCCCGGCCCCATGA

Peptide Sequence

PEP ID	Os11t0192500-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:4658961:4659953:1 gene:Os11g0192500 transcript:Os11t0192500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectinesterase family protein. (Os11t0192500-00)
Sequence	MAGSSSLASPRSLQLPLLLLFLLVAAAIGSYDPKAFCSKTTDVASCLKVFPTLPDIVTKA QDNQELYKRLVRYCSFKTYEATSLAESMIATTTAANPANIATFFEQWKGDEAITTKTPPG KCLLSCNKTIGEVNAILTCGHTYMEDRPPIIHQNLTVLFHGGHPPSLCKSGCLDGSSSEG EVLLATKFNYIWSLLDLMEAVLPEYLSETGTATTTVPSPDVAAAAAPAP

Transcript Sequence

Transcript ID	Os11t0192500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:4658961:4659953:1 gene:Os11g0192500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pectinesterase family protein. (Os11t0192500-00)
Sequence	GTTACCCTCAATTCCCATCCTAGCAAGCATGGCCGGCTCTTCCTCTCTTGCATCGCCTCG CTCACTACAGCTACCACTCCTCCTCCTTTTCCTCCTCGTTGCCGCTGCGATAGGCAGCTA CGACCCCAAGGCGTTCTGTTCCAAGACGACAGACGTAGCATCGTGCCTTAAGGTGTTCCC GACACTCCCAGACATCGTCACCAAGGCGCAGGACAACCAAGAGTTGTACAAACGGCTGGT CCGCTACTGCTCATTCAAGACCTACGAGGCCACGTCGCTCGCGGAATCCATGATTGCCAC CACCACCGCCGCCAACCCCGCGAATATCGCCACCTTCTTCGAGCAGTGGAAAGGGGACGA GGCGATAACGACAAAAACACCTCCAGGCAAGTGCCTCTTGAGCTGCAACAAGACCATCGG CGAAGTTAACGCCATCCTAACCTGCGGACACACCTACATGGAAGACAGGCCCCCCATCAT CCACCAGAACCTCACCGTCTTGTTCCATGGCGGCCACCCGCCGTCACTCTGCAAGAGTGG ATGCCTTGACGGCTCGTCGTCAGAGGGTGAGGTCCTCCTCGCCACCAAGTTCAACTATAT ATGGAGCTTGTTGGATCTCATGGAAGCTGTCCTACCGGAATATCTTTCTGAGACTGGGAC TGCGACGACGACGGTACCATCTCCCGACGTCGCTGCGGCGGCGGCCCCGGCCCCATGAGC AACTACATATGCATGCAGTCCCTTCGATTCGATCGACCACACCACAACAGTGCAGTGCAT ACACGCATATACTTACTATGTATCTAAGAAATAATTAAGATTTCACAGAGAGCATTTAAG AATCAAGTTTCACTAATTGTTGCAGTATATAGTAGCCCATTTAATTTCATCCATCAGTTA GAGTCTCACCATGTTACGGTCCGTTTTGTGCCTTTTATTCGCTCCAAAATATAGTGTTCT AATTCTTACCGTGGAATTGGATGTTCACCCCTC