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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0191500-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:4634063:4634617:1 gene:Os11g0191500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os11t0191500-00)
Sequence

ATGGCGGCCGTCGGCCTGTTAGTACTACTCCTGGTGGTGGGCGGGTGGGTGGCGGCGCAA
GAAGCAGGTGATGCCCCGGCGAGCATCGTGGGGCCATGCTCGCGTACAGGAGACAAGAAG
GCGTGCGTGGAGTTGTTGTCGGGCATCCCGGAGGCCCGGAAGGCGACGACGGTGGGCCCT
CTCGCGGAGCTGTACCTGCGGGCAATCGCCAACCAGACGACGGAGGCCAAGGCGATGGCT
ACCAAGCTGCTAGCCACCATGAAGGGGAAGGGCGTGCCACCCGTGTGCCTCCAGCAGTGC
ACCGCCAGCGTCGACACCCTCTCCAACGCCCTCGCCGCCTTCTTCTCTGCCTCCGCCGAC
GTCAACAAAAAGTACAGGGACTTGGACGGTTTTCTCGTGGGCTTTCTTAAACAACCGCCC
ATCTGCATGAGCGCGTGCCCCATCCGGTCGTGCGATATGGAAGAGGTCACTATCGCCGAC
AAGTTCCACCAAGCCTGGAAGATGTTGGGTGTCGCACACGACCTCATCACGCAGATCCTA
GGCACAAAGTCCTAG

Peptide Sequence

PEP ID

Os11t0191500-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:4634063:4634617:1 gene:Os11g0191500 transcript:Os11t0191500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os11t0191500-00)
Sequence

MAAVGLLVLLLVVGGWVAAQEAGDAPASIVGPCSRTGDKKACVELLSGIPEARKATTVGP
LAELYLRAIANQTTEAKAMATKLLATMKGKGVPPVCLQQCTASVDTLSNALAAFFSASAD
VNKKYRDLDGFLVGFLKQPPICMSACPIRSCDMEEVTIADKFHQAWKMLGVAHDLITQIL
GTKS

Transcript Sequence

Transcript ID

Os11t0191500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:4634063:4634617:1 gene:Os11g0191500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os11t0191500-00)
Sequence

ATGGCGGCCGTCGGCCTGTTAGTACTACTCCTGGTGGTGGGCGGGTGGGTGGCGGCGCAA
GAAGCAGGTGATGCCCCGGCGAGCATCGTGGGGCCATGCTCGCGTACAGGAGACAAGAAG
GCGTGCGTGGAGTTGTTGTCGGGCATCCCGGAGGCCCGGAAGGCGACGACGGTGGGCCCT
CTCGCGGAGCTGTACCTGCGGGCAATCGCCAACCAGACGACGGAGGCCAAGGCGATGGCT
ACCAAGCTGCTAGCCACCATGAAGGGGAAGGGCGTGCCACCCGTGTGCCTCCAGCAGTGC
ACCGCCAGCGTCGACACCCTCTCCAACGCCCTCGCCGCCTTCTTCTCTGCCTCCGCCGAC
GTCAACAAAAAGTACAGGGACTTGGACGGTTTTCTCGTGGGCTTTCTTAAACAACCGCCC
ATCTGCATGAGCGCGTGCCCCATCCGGTCGTGCGATATGGAAGAGGTCACTATCGCCGAC
AAGTTCCACCAAGCCTGGAAGATGTTGGGTGTCGCACACGACCTCATCACGCAGATCCTA
GGCACAAAGTCCTAG