Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0189600-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:4522342:4557876:1 gene:Os11g0189600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 7, parkeol synthase description:Similar to Cycloartenol synthase. (Os11t0189600-01);Similar to cDNA clone:J013062J12, full insert sequence. (Os11t0189600-02)
Sequence	ATGTGGAGGCTGAAGGTGTCGGAGGGCGGCAGCCCATGGCTGCGGTCGGTAAACAATCTC CTCGGCCGGCAAGTGTGGGAGTTCGACCCTGACCTCGGCACGCCAGAGGAGCGCGCCGAT GTGGAGAAGGCGCGCCGCGAGTTCGCCGAGCACCGCTTCGAGCGCAAGCATTCTAGCGAC CTCCTCATGCGGATGCAGTTCGCTAAAGAAAACTGTCAAAAGCTGGACCTTCTCGCTGTC AAGCGTGGAGAGCACGAAGACGTCATGGGGGAAGCTGTGTGGAGCTCTTTGAAACGGGCC ATAAGCCGCGTTTGTAATTTGCAGGCACATGATGGACACTGGCCCGGGGATTATGCAGGA CTTATGTTCTTTTTGCCTGGCTTGATTATAACATTGCATGTCAGTGGAGTTCTGAACACT GTTTTATCATCGGAACATCAGAAGGAGATGCGCCGGTACATCTATAATCACCAGAATGAA GATGGAGGGTGGGGGTTGCACATTGAGGGCCACAGCACCATGCTTGGCTCATCCCTGAAC TATGTTGCTTTGAGATTGCTTGGGGAGGGTCCAAATGGTGGAGATGGATGCATAGAGAAT GGTCGAAACTGGATTTTAGATCATGGAGGAGCCACATTTACGACATCATGGGGGAAGTTC TGGCTCTCGGTACTTGGAGTATTTGATTGGTCCGGTAATAACCCAGTGCCACCAGAGTTA TTACTATTGCCGTATCAACTGCCGTTTCACCCAGGTCGAATGTCGAGCTATATCCGAATG GTGTTTATACCCATGTCTTACATTTATGGAAAAAGGTTTGTTGGCCCAGTAACACCAGTT GTGCTAGAGCTAAGAAGTGAACTATACAATGACCCCTATGATGAGATTGACTGGAACAAA GCTCGTACTCAGTGTGCAAAGGAAGATATGTACTATCCACGTTCATCCAAACTGGATATG TTTTGGTCCTTTCTCCACAAGTTTATTGAACCAGTTTTGTTGCGCTGGCCTGGGAGAAAA CTGAGGGAGAAAGCTCTGGCCACTTCCATGAGGAATGTTCACTATGAAGATGAGTGCACT CGATACATCTGTTTCGGTGGTGTACCCAAGGCATTAAATATCCTTGCTTGCTGGATTGAA GATCCAAGCTCAGAGGCATTCAAATGCCATATTGCACGCGTATATGATTATTTATGGATC GCTGAAGACGGCATGAAGATGCAGATTTACGATGGCAGCCAGGTGTGGGACGCAGGTTTG ACAGTTGAGGCCCTTGTGGCTACTGACCTTGTCAAAGAGCTTGGACCAACTCTTAAACGA GCGCATTCCTTCCTTAAGAATTCGCAGTTGCTTGACAATTGCCCCCGAGATTTCAACCGC TGGTATCGCCATATATCCAAAGGTGGATGGACATTTACAACAGCTGATGATGGCTGGCAA GTTTCAGATTGCACGGCGACAGCACTGAAGGCATGTCTATTGTTATCAAGGATATCTCCT GAAATCGTTGGTGAACCACTGGAAATTGATGCACAATACGATGCTGTTAATTGTCTGATG TCTTTGATGAATGATAATGGTGGCTTTTCAGCATTTGAACTCGTAAGGTCTAATACATGG CTGGAGCATATTAATCCTACAGAGGCATTTGGGCGTGTAATGATTGAATATCCGTATGTC GAATGTACATCATCATCAATTCAGTGTCTAGCATTATTCAAAAAACTTCACCCAGGGCAC CGCAAGGAAGAGGTGGAAAATTGTATCAGCAAAGGTGCTAATTTCATTGAGAGTTCTCAG AGAAGCGATGGTTCATGGTATGGTTCTTGGGGGATTTGTTTCACCTATGCCACATGGTTT GCAGTGACAGGATTAGTTTCTGCAGGCAGGACACTTGGGAATAGCGCTACAGTTAGAAAG GCATGTGACTTTCTCTTGTCAAAACAGCTTCCTTCGGGTGGCTGGGGCGAGAGCTATTTG TCATGTCATGACGAGGTTTACACAAATCTTAAAGGCAACCGACCTCACGGTACGCACACT GCGTGGGCCATGATTGCACTAATTGATGCAGGGCAGGCTGAAAGAGATCCAGTGCCTCTG CATCGAGCAGCCAAGGCTTTGCTCAACTTGCAATTAGAGGATGGAGAATTTCCACAGCAA GAAATTGTTGGAGTCTTTCTCCAAACTGCCATGATCAGTTATTCCCAGTACAGGAACATC TTCCCTATAATGGCTCTCACAGGGTATCGCCGCCGAGTACTGCTTGCAGGCAACATATAG

Peptide Sequence

PEP ID	Os11t0189600-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:4522342:4557876:1 gene:Os11g0189600 transcript:Os11t0189600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 7, parkeol synthase description:Similar to Cycloartenol synthase. (Os11t0189600-01);Similar to cDNA clone:J013062J12, full insert sequence. (Os11t0189600-02)
Sequence	MWRLKVSEGGSPWLRSVNNLLGRQVWEFDPDLGTPEERADVEKARREFAEHRFERKHSSD LLMRMQFAKENCQKLDLLAVKRGEHEDVMGEAVWSSLKRAISRVCNLQAHDGHWPGDYAG LMFFLPGLIITLHVSGVLNTVLSSEHQKEMRRYIYNHQNEDGGWGLHIEGHSTMLGSSLN YVALRLLGEGPNGGDGCIENGRNWILDHGGATFTTSWGKFWLSVLGVFDWSGNNPVPPEL LLLPYQLPFHPGRMSSYIRMVFIPMSYIYGKRFVGPVTPVVLELRSELYNDPYDEIDWNK ARTQCAKEDMYYPRSSKLDMFWSFLHKFIEPVLLRWPGRKLREKALATSMRNVHYEDECT RYICFGGVPKALNILACWIEDPSSEAFKCHIARVYDYLWIAEDGMKMQIYDGSQVWDAGL TVEALVATDLVKELGPTLKRAHSFLKNSQLLDNCPRDFNRWYRHISKGGWTFTTADDGWQ VSDCTATALKACLLLSRISPEIVGEPLEIDAQYDAVNCLMSLMNDNGGFSAFELVRSNTW LEHINPTEAFGRVMIEYPYVECTSSSIQCLALFKKLHPGHRKEEVENCISKGANFIESSQ RSDGSWYGSWGICFTYATWFAVTGLVSAGRTLGNSATVRKACDFLLSKQLPSGGWGESYL SCHDEVYTNLKGNRPHGTHTAWAMIALIDAGQAERDPVPLHRAAKALLNLQLEDGEFPQQ EIVGVFLQTAMISYSQYRNIFPIMALTGYRRRVLLAGNI

Transcript Sequence

Transcript ID	Os11t0189600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:4522342:4557876:1 gene:Os11g0189600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:oxidosqualene cyclase 7, parkeol synthase description:Similar to Cycloartenol synthase. (Os11t0189600-01);Similar to cDNA clone:J013062J12, full insert sequence. (Os11t0189600-02)
Sequence	GGTGTGTTGGAGATGCTTTGACCCTCTATAAAATTAAGTTGATACCGGAGCATATATACG CACCTTAGCTATTAGACCACCACCTTCTTCCGGACTCGTACATGTGGAGGCTGAAGGTGT CGGAGGGCGGCAGCCCATGGCTGCGGTCGGTAAACAATCTCCTCGGCCGGCAAGTGTGGG AGTTCGACCCTGACCTCGGCACGCCAGAGGAGCGCGCCGATGTGGAGAAGGCGCGCCGCG AGTTCGCCGAGCACCGCTTCGAGCGCAAGCATTCTAGCGACCTCCTCATGCGGATGCAGT TCGCTAAAGAAAACTGTCAAAAGCTGGACCTTCTCGCTGTCAAGCGTGGAGAGCACGAAG ACGTCATGGGGGAAGCTGTGTGGAGCTCTTTGAAACGGGCCATAAGCCGCGTTTGTAATT TGCAGGCACATGATGGACACTGGCCCGGGGATTATGCAGGACTTATGTTCTTTTTGCCTG GCTTGATTATAACATTGCATGTCAGTGGAGTTCTGAACACTGTTTTATCATCGGAACATC AGAAGGAGATGCGCCGGTACATCTATAATCACCAGAATGAAGATGGAGGGTGGGGGTTGC ACATTGAGGGCCACAGCACCATGCTTGGCTCATCCCTGAACTATGTTGCTTTGAGATTGC TTGGGGAGGGTCCAAATGGTGGAGATGGATGCATAGAGAATGGTCGAAACTGGATTTTAG ATCATGGAGGAGCCACATTTACGACATCATGGGGGAAGTTCTGGCTCTCGGTACTTGGAG TATTTGATTGGTCCGGTAATAACCCAGTGCCACCAGAGTTATTACTATTGCCGTATCAAC TGCCGTTTCACCCAGGTCGAATGTCGAGCTATATCCGAATGGTGTTTATACCCATGTCTT ACATTTATGGAAAAAGGTTTGTTGGCCCAGTAACACCAGTTGTGCTAGAGCTAAGAAGTG AACTATACAATGACCCCTATGATGAGATTGACTGGAACAAAGCTCGTACTCAGTGTGCAA AGGAAGATATGTACTATCCACGTTCATCCAAACTGGATATGTTTTGGTCCTTTCTCCACA AGTTTATTGAACCAGTTTTGTTGCGCTGGCCTGGGAGAAAACTGAGGGAGAAAGCTCTGG CCACTTCCATGAGGAATGTTCACTATGAAGATGAGTGCACTCGATACATCTGTTTCGGTG GTGTACCCAAGGCATTAAATATCCTTGCTTGCTGGATTGAAGATCCAAGCTCAGAGGCAT TCAAATGCCATATTGCACGCGTATATGATTATTTATGGATCGCTGAAGACGGCATGAAGA TGCAGATTTACGATGGCAGCCAGGTGTGGGACGCAGGTTTGACAGTTGAGGCCCTTGTGG CTACTGACCTTGTCAAAGAGCTTGGACCAACTCTTAAACGAGCGCATTCCTTCCTTAAGA ATTCGCAGTTGCTTGACAATTGCCCCCGAGATTTCAACCGCTGGTATCGCCATATATCCA AAGGTGGATGGACATTTACAACAGCTGATGATGGCTGGCAAGTTTCAGATTGCACGGCGA CAGCACTGAAGGCATGTCTATTGTTATCAAGGATATCTCCTGAAATCGTTGGTGAACCAC TGGAAATTGATGCACAATACGATGCTGTTAATTGTCTGATGTCTTTGATGAATGATAATG GTGGCTTTTCAGCATTTGAACTCGTAAGGTCTAATACATGGCTGGAGCATATTAATCCTA CAGAGGCATTTGGGCGTGTAATGATTGAATATCCGTATGTCGAATGTACATCATCATCAA TTCAGTGTCTAGCATTATTCAAAAAACTTCACCCAGGGCACCGCAAGGAAGAGGTGGAAA ATTGTATCAGCAAAGGTGCTAATTTCATTGAGAGTTCTCAGAGAAGCGATGGTTCATGGT ATGGTTCTTGGGGGATTTGTTTCACCTATGCCACATGGTTTGCAGTGACAGGATTAGTTT CTGCAGGCAGGACACTTGGGAATAGCGCTACAGTTAGAAAGGCATGTGACTTTCTCTTGT CAAAACAGCTTCCTTCGGGTGGCTGGGGCGAGAGCTATTTGTCATGTCATGACGAGGTTT ACACAAATCTTAAAGGCAACCGACCTCACGGTACGCACACTGCGTGGGCCATGATTGCAC TAATTGATGCAGGGCAGGCTGAAAGAGATCCAGTGCCTCTGCATCGAGCAGCCAAGGCTT TGCTCAACTTGCAATTAGAGGATGGAGAATTTCCACAGCAAGAAATTGTTGGAGTCTTTC TCCAAACTGCCATGATCAGTTATTCCCAGTACAGGAACATCTTCCCTATAATGGCTCTCA CAGGGTATCGCCGCCGAGTACTGCTTGCAGGCAACATATAGGAGCATGATTTTAAGTTAT GCCAGCTCTTGGCATGTTGGTTTGCCAATAAAGTTACATTTCACCTCCCCTAGCAGCAGT ACTCTCTACTGTTCTAGCGTTTGTATTTTGTATTTTCTAAGAAAAAAATGTTTTACCGCA TTTACTTAGTTCCCTTTGTTTGTAATAAAACATGGAACATACTGCTTCCTTGTAGTT