Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0186800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:4413240:4415867:1 gene:Os11g0186800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 25 description:Similar to inorganic phosphate cotransporter. (Os11t0186800-01)
Sequence

AGATATCTGCCAGCAAGTATAACGATGAAGTTTCCAAAACGCTATGCCATAGTGTTACTG
ACATTTATGTGCACCAATGTGTGCTACATTGAGCGGGTGGGCTTCTCAATCGCTTACACT
GTGGCAGCTGATGCTGTTGGCACAAACCAAGCAAACAAAGGCATGATACTATCTATGTTC
TACTATGGGTATGTTCTATCACAGATTCCTGGTGGATGGGCAGCTCAGAGGCTGGGAGGT
AGACTTGTCCTGCTACTGTCATTTGTGCTGTGGTCTTCGATCTGTGCTGTTGTTCCACTA
GACCCAAACAGAGTAATTCTGCTTGTTCTTTCTCGCCTTCTGGTGGGTGTTGCACAAGGC
TTAATATTCCCTTCCATTCACACTGTCCTGGCGCAATGGGTGCCACCCCAGGAGCGTTCT
CGCTCGGTGTCCCTAACTACCTCAGGGATGTATCTTGGTGCAGCGTGTGGTATGCTTTTG
CTTCCAAGTCTGGTGAAGAACATGGGACCCCAGTCAGTTTTCTCTGTTGAAGCAATGTTG
GGTGTGGCATGGCTTTTAATATGGTTCAAATTTGCCAGTGACCCGCCTCGCACTGATCTT
CCAAAGGTGGCCTCCAAAGATAAGATGAAGGTACAAACCGGTGGGATTATGGCTCCTCGC
ACTGTGAAGATTCCATGGGCAAGGATACTTTTTAGCTTGCCGATTTGGGCAATTGTTGTG
AACAACTTCACCTTCCACTATGCACTGTATGTTCTGATGAACTGGCTGCCGACATACTTC
AAATTAGGACTTCAACTAAGCCTCCAGGACATGGGGTTTTCAAAGATGCTTCCTTATTTG
AATATGTTTTTATTCTCGAACATTGGTGGGGTCCTCGCTGATCACCTGATTACAAGAAAG
ATATTATCTGTTACCAAGACAAGGAAACTTCTGAACACAGTCGGGTTTGTCGTCTCAGCC
ATTGCACTCATGGCCCTTCCATTATTCAGAACACCTTCAGGGGCAATATTCTGCTCATCA
GTATCTCTTGGTTTTCTGGCTCTAGGAAGGGCAGGATTTGCTGTAAACCACATGGATGTG
GCTCCAAAATTTGCTGGGATTGTGATGGGGATCTCAAACACAGCTGGGACTTTGGCAGGA
ATAGTTGGTGTTGGTCTCACAGGAAGAATTCTGGAGGCAGCGAAGGCATCTAACATGGAC
CTGACAAGCTCGGAAAGTTGGAGGACAGTCTTCTTTGTTCCAGGATACCTTTGTATTTTC
AGCTCCTTCATTTTCTTGATTTTCTCAACTGGGGAGAAGATCTTCGAATAG

Peptide Sequence

PEP ID

Os11t0186800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:4413240:4415867:1 gene:Os11g0186800 transcript:Os11t0186800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 25 description:Similar to inorganic phosphate cotransporter. (Os11t0186800-01)
Sequence

RYLPASITMKFPKRYAIVLLTFMCTNVCYIERVGFSIAYTVAADAVGTNQANKGMILSMF
YYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVPLDPNRVILLVLSRLLVGVAQG
LIFPSIHTVLAQWVPPQERSRSVSLTTSGMYLGAACGMLLLPSLVKNMGPQSVFSVEAML
GVAWLLIWFKFASDPPRTDLPKVASKDKMKVQTGGIMAPRTVKIPWARILFSLPIWAIVV
NNFTFHYALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHLITRK
ILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFAVNHMDV
APKFAGIVMGISNTAGTLAGIVGVGLTGRILEAAKASNMDLTSSESWRTVFFVPGYLCIF
SSFIFLIFSTGEKIFE

Transcript Sequence

Transcript ID

Os11t0186800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:4413240:4415867:1 gene:Os11g0186800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHATE TRANSPORTER 25 description:Similar to inorganic phosphate cotransporter. (Os11t0186800-01)
Sequence

CCTTTTTAAGTTAAAATCCCCAAAATCCGACCCGGTAACAGGTCTAGCTCCATCCTCCTC
CTCTCTCAGATCGATCCCACCACCGCCGGCTCGCCGCCGCCGCCGCCGCCGTTGGGGACG
GCGATCGAGCAAGGGGCCGTTCAGTGCGGGCGCAGCAAGGAGTGCGCTCGCCCTGCTCGC
GCTCACATACACCTCGAACTTCCGCGGGCTGCACCTCGTCGGGCCTCTCCCCGTCGGTCG
CGCTCGCCGTCCCCAAGATCCGCTCGTCCTGTCCCGTCCCGGTGGCTCGCCGTCGTCGAG
CCCCGCGCCTACTTCAACTCCATGAGCTTACCGGTCATGAACTGATAAGTGAGAGTTCTC
TGTTCCTCGCTCGTACAATCAGGCGGATAGCAACGACATCATGCATAACTGAGAAGGCCC
ATGCCATTTGCAACTGGTGTTTGCGGATAAATGTACTGTTTCACATGCCTGTACACTAAG
AGCTGGATGCAAGATACTCTGGGTTTTGGTGAATTTTGGTGAGCTCTTGTGGAACATCAG
TAAGAATTTTGACCTGAAGATATCTGCCAGCAAGTATAACGATGAAGTTTCCAAAACGCT
ATGCCATAGTGTTACTGACATTTATGTGCACCAATGTGTGCTACATTGAGCGGGTGGGCT
TCTCAATCGCTTACACTGTGGCAGCTGATGCTGTTGGCACAAACCAAGCAAACAAAGGCA
TGATACTATCTATGTTCTACTATGGGTATGTTCTATCACAGATTCCTGGTGGATGGGCAG
CTCAGAGGCTGGGAGGTAGACTTGTCCTGCTACTGTCATTTGTGCTGTGGTCTTCGATCT
GTGCTGTTGTTCCACTAGACCCAAACAGAGTAATTCTGCTTGTTCTTTCTCGCCTTCTGG
TGGGTGTTGCACAAGGCTTAATATTCCCTTCCATTCACACTGTCCTGGCGCAATGGGTGC
CACCCCAGGAGCGTTCTCGCTCGGTGTCCCTAACTACCTCAGGGATGTATCTTGGTGCAG
CGTGTGGTATGCTTTTGCTTCCAAGTCTGGTGAAGAACATGGGACCCCAGTCAGTTTTCT
CTGTTGAAGCAATGTTGGGTGTGGCATGGCTTTTAATATGGTTCAAATTTGCCAGTGACC
CGCCTCGCACTGATCTTCCAAAGGTGGCCTCCAAAGATAAGATGAAGGTACAAACCGGTG
GGATTATGGCTCCTCGCACTGTGAAGATTCCATGGGCAAGGATACTTTTTAGCTTGCCGA
TTTGGGCAATTGTTGTGAACAACTTCACCTTCCACTATGCACTGTATGTTCTGATGAACT
GGCTGCCGACATACTTCAAATTAGGACTTCAACTAAGCCTCCAGGACATGGGGTTTTCAA
AGATGCTTCCTTATTTGAATATGTTTTTATTCTCGAACATTGGTGGGGTCCTCGCTGATC
ACCTGATTACAAGAAAGATATTATCTGTTACCAAGACAAGGAAACTTCTGAACACAGTCG
GGTTTGTCGTCTCAGCCATTGCACTCATGGCCCTTCCATTATTCAGAACACCTTCAGGGG
CAATATTCTGCTCATCAGTATCTCTTGGTTTTCTGGCTCTAGGAAGGGCAGGATTTGCTG
TAAACCACATGGATGTGGCTCCAAAATTTGCTGGGATTGTGATGGGGATCTCAAACACAG
CTGGGACTTTGGCAGGAATAGTTGGTGTTGGTCTCACAGGAAGAATTCTGGAGGCAGCGA
AGGCATCTAACATGGACCTGACAAGCTCGGAAAGTTGGAGGACAGTCTTCTTTGTTCCAG
GATACCTTTGTATTTTCAGCTCCTTCATTTTCTTGATTTTCTCAACTGGGGAGAAGATCT
TCGAATAGTCAGGTGATTATTTGTTGTTACTAACTTACGATGAGGGGAGGTGTCAATTCT
TAGGTTTTTTCCAGAACTTTTGGACTACCTGCCAATAGATTTTAGGCAAAAAAGAAGGGG
ACAAATTTTGCCTGTCAGAACAGATAGCAGTGATGATGTTATAGGCACTAACTCATGTTA
CTTCATTTAAGCTGTACTCATTATCTATATAAATGAAATGTTATACTTGCATC