Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0186400-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:4387512:4397808:-1 gene:Os11g0186400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYMERASE (DNA DIRECTED), DELTA 1 description:Similar to DNA polymerase delta catalytic subunit (EC 2.7.7.7). (Os11t0186400-00)
Sequence	ATGAGCTCAGGCGGACGCGGCGGCAAGCGGCGAGGGGCGCCGCCCCCGGGGCCATCCGGG GCGGCGGCGAAGCGGGCCCACCCCGGTGGCACCCCGCAGCCGCCTCCGCCCGCCGCGACG GCGGCGGCGCCCGTGGCGGAGGAGGAGGACATGATGGACGAGGACGTCTTCCTCGACGAG ACCATCCTGGCGGAGGACGAGGAGGCGTTGCTGCTGCTCGACCGGGACGAGGCCCTCGCC TCACGCCTCTCCCGCTGGAGGCGCCCCGCGCTCCCCGCCGACCTAGCGTCCGGCTGCTCG CGCAATGTTGCTTTTCAGCAGCTGGAGATAGATTATGTTATTGGTGAGAGCCACAAAGTA CTGCTCCCCAACTCATCTGGTCCTGCAGCTATACTCAGGATATTTGGCGTAACTAGAGAA GGTCACAGTGTATGCTGCCAAGTGCATGGATTTGAGCCATATTTCTACATCAGTTGTCCA ATGGGGATGGGCCCTGATGATATTTCACGCTTCCACCAAACACTAGAGGGGAGGATGAAG GATTCAAATAGGAACAGCAACGTGCCAAGGTTTGTGAAGAGAATCGAACTTGTGCAGAAG CAGACAATCATGCATTACCAACCACAGCAATCTCAGCCTTTCCTCAAGATAGTGGTTGCT TTGCCAACAATGGTTGCTAGTTGTCGCGGCATCCTGGAAAGGGGCATAACAATTGAAGGC CTTGGTTCGAAGAGTTTTCTGACATATGAAAGCAACATTCTTTTTGCACTTCGCTTCATG ATTGACTGCAATATTGTTGGTGGTAATTGGATTGAAGTTCCTGCCGGAAAGTATATGAAG GCAGCTCGTATCATGTCCTATTGTCAGCTAGAGTTGGATTGCCTATATTCGGATTTGGTA AGCCATGCTGCTGAAGGAGAACATTCTAAGATGGCTCCATTTCGCATATTAAGTTTTGAT ATTGAATGTGCCGGTCGCAAAGGTCACTTCCCAGAACCAACTCATGATCCCGTTATTCAG ATAGCTAACTTGGTCACCCTTCAAGGAGAAGGACAACCTTTTGTACGCAATGTTATGACG CTTAAATCATGTTCTCCCATTGTTGGAGTTGATGTTATGTCATTTGACACAGAGAGGGAT GTTCTACTTGCTTGGAGGGATTTCATACGTGAAGTGGACCCTGATATTATTATTGGATAC AATATCTGCAAATTTGACTTACCCTATCTTATTGAGAGAGCTGAAGTTCTTAAGATAGTA GAGTTTCCAATACTTGGACGAATCAGAAATAGTCGTGTTCGTGTCCGTGACACAACTTTC TCTTCAAGGCAATATGGTATGCGTGAAAGTAAAGATGTAGCAGTGGAAGGAAGAGTACAA TTTGATCTTCTGCAGGCTATGCAACGGGATTACAAGCTTAGTTCTTATTCATTAAACTCT GTATCTGCACATTTCCTCGGGGAGCAAAAAGAGGATGTTCATCACTCAATTATATCTGAT CTTCAAAATGGGAATTCAGAGACACGAAGACGGCTTGCGGTTTATTGTTTGAAGGATGCC TATCTTCCACAACGACTGCTAGATAAGTTGATGTATATCTACAACTATGTGGAAATGGCA AGAGTCACTGGAGTTCCCATTTCATTTCTTCTTTCAAGGGGACAGAGCATTAAGGTCCTC TCACAGCTACTCAGGAAAGCAAAACAGAAAAACCTTGTTATACCAAATATAAAGGGTCAA GCGTCTGGACAGGATACCTTTGAAGGTGCAACTGTTTTGGAGGCAAGGGCTGGATTTTAT GAGAAACCCATTGCGACTTTGGACTTTGCTTCGTTGTATCCATCCATCATGATGGCATAT AACCTATGCTACTGTACTTTGGTCCCCCCTGAGGATGCCCGCAAACTCAACCTGCCTCCA GAAAGTGTCAACAAAACCCCATCTGGTGAAACATTTGTGAAACCAGATGTGCAAAAGGGT ATACTTCCTGAAATCCTTGAAGAATTGTTGGCTGCTCGGAAAAGGGCGAAAGCAGATTTG AAGGAAGCAAAGGATCCATTTGAAAGGGCCGTTCTTGATGGTCGTCAGCTTGCCCTAAAA ATAAGCGCAAACTCTGTCTATGGTTTTACTGGAGCGACTGTTGGTCAATTACCTTGTTTA GAAATTTCTTCAAGTGTGACCAGCTATGGTCGACAGATGATTGAACATACAAAAAAGCTT GTTGAAGATAAATTCACGACACTTGGAGGCTATGAGCACAATGCAGAGGTCATCTATGGA GATACTGATTCTGTAATGGTACAGTTCGGTGTTTCTACTGTTGAGGACGCAATGAAGCTA GGAAGAGAAGCTGCAGACTACATTAGTGGAACATTTATTAAGCCCATCAAGCTTGAGTTT GAGAAGATCTATTTCCCTTATCTACTGATTAGCAAGAAGAGATATGCTGGTTTGTACTGG ACAAATCCTGAGAAATTTGACAAAATGGACACGAAAGGTATTGAAACAGTGAGAAGGGAC AACTGTTTATTAGTAAAGAACCTGGTTACTGAGTGCCTTCATAAAATACTAGTGGACAGA GATGTTCCTGGTGCAGTTCAATATGTCAAGAACACCATTTCTGATCTACTAATGAACCGT GTAGACTTATCTCTTCTAGTTATAACAAAGGGTTTGACTAAAACAGGAGAGGATTATGCT GTCAAAGCTGCCCATGTGGAGCTTGCTGAGAGAATGCGAAAGAGGGACGCTGCTACTGCT CCTACTGTTGGTGACCGGGTTCCTTATGTTATAATCAAAGCAGCAAAAGGGGCAAAGGCA TATGAGAGGTCAGAAGATCCTATTTATGTTTTGGATAATAACATACCAATAGATCCCCAA TACTACCTTGAGAACCAAATCAGCAAACCACTTTTGAGGATCTTTGAGCCGATTCTGAAG AATGCCAGTAGAGAGCTGCTTCATGGAAGTCACACCAGGGCTGTTTCAATCTCAACTCCT TCAAATAGTGGAATAATGAAATTTGCAAAGAAACAATTGACATGCCTCGGATGCAAAGCA GTTATAAGTGGTTCCAATCAAACGCTTTGCTTTCATTGCAAGGGAAGAGAAGCAGAGTTA TACTGCAAAACTGTAGGAAACGTTTCTGAGCTGGAGATGCTCTTTGGGAGGCTCTGGACG CAGTGCCAGGAGTGCCAAGGCTCCCTTCATCAGGACGTTCTCTGCACAAGCCGGGATTGT CCTATTTTCTACCGCCGAAGAAAGGCGCAGAAGGATATGGCTGAAGCTAGAGTACAGCTT CAACGTTGGGACTTCTGA

Peptide Sequence

PEP ID	Os11t0186400-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:4387512:4397808:-1 gene:Os11g0186400 transcript:Os11t0186400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYMERASE (DNA DIRECTED), DELTA 1 description:Similar to DNA polymerase delta catalytic subunit (EC 2.7.7.7). (Os11t0186400-00)
Sequence	MSSGGRGGKRRGAPPPGPSGAAAKRAHPGGTPQPPPPAATAAAPVAEEEDMMDEDVFLDE TILAEDEEALLLLDRDEALASRLSRWRRPALPADLASGCSRNVAFQQLEIDYVIGESHKV LLPNSSGPAAILRIFGVTREGHSVCCQVHGFEPYFYISCPMGMGPDDISRFHQTLEGRMK DSNRNSNVPRFVKRIELVQKQTIMHYQPQQSQPFLKIVVALPTMVASCRGILERGITIEG LGSKSFLTYESNILFALRFMIDCNIVGGNWIEVPAGKYMKAARIMSYCQLELDCLYSDLV SHAAEGEHSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQGEGQPFVRNVMT LKSCSPIVGVDVMSFDTERDVLLAWRDFIREVDPDIIIGYNICKFDLPYLIERAEVLKIV EFPILGRIRNSRVRVRDTTFSSRQYGMRESKDVAVEGRVQFDLLQAMQRDYKLSSYSLNS VSAHFLGEQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMA RVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNIKGQASGQDTFEGATVLEARAGFY EKPIATLDFASLYPSIMMAYNLCYCTLVPPEDARKLNLPPESVNKTPSGETFVKPDVQKG ILPEILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCL EISSSVTSYGRQMIEHTKKLVEDKFTTLGGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKL GREAADYISGTFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRD NCLLVKNLVTECLHKILVDRDVPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYA VKAAHVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYERSEDPIYVLDNNIPIDPQ YYLENQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKA VISGSNQTLCFHCKGREAELYCKTVGNVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDC PIFYRRRKAQKDMAEARVQLQRWDF

Transcript Sequence

Transcript ID	Os11t0186400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:4387512:4397808:-1 gene:Os11g0186400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLYMERASE (DNA DIRECTED), DELTA 1 description:Similar to DNA polymerase delta catalytic subunit (EC 2.7.7.7). (Os11t0186400-00)
Sequence	CTCTCTTCCCGCGTTCCCCTCTCCCTCCCCCTCCCCCCTCTCCGGCGATGAGCTCAGGCG GACGCGGCGGCAAGCGGCGAGGGGCGCCGCCCCCGGGGCCATCCGGGGCGGCGGCGAAGC GGGCCCACCCCGGTGGCACCCCGCAGCCGCCTCCGCCCGCCGCGACGGCGGCGGCGCCCG TGGCGGAGGAGGAGGACATGATGGACGAGGACGTCTTCCTCGACGAGACCATCCTGGCGG AGGACGAGGAGGCGTTGCTGCTGCTCGACCGGGACGAGGCCCTCGCCTCACGCCTCTCCC GCTGGAGGCGCCCCGCGCTCCCCGCCGACCTAGCGTCCGGCTGCTCGCGCAATGTTGCTT TTCAGCAGCTGGAGATAGATTATGTTATTGGTGAGAGCCACAAAGTACTGCTCCCCAACT CATCTGGTCCTGCAGCTATACTCAGGATATTTGGCGTAACTAGAGAAGGTCACAGTGTAT GCTGCCAAGTGCATGGATTTGAGCCATATTTCTACATCAGTTGTCCAATGGGGATGGGCC CTGATGATATTTCACGCTTCCACCAAACACTAGAGGGGAGGATGAAGGATTCAAATAGGA ACAGCAACGTGCCAAGGTTTGTGAAGAGAATCGAACTTGTGCAGAAGCAGACAATCATGC ATTACCAACCACAGCAATCTCAGCCTTTCCTCAAGATAGTGGTTGCTTTGCCAACAATGG TTGCTAGTTGTCGCGGCATCCTGGAAAGGGGCATAACAATTGAAGGCCTTGGTTCGAAGA GTTTTCTGACATATGAAAGCAACATTCTTTTTGCACTTCGCTTCATGATTGACTGCAATA TTGTTGGTGGTAATTGGATTGAAGTTCCTGCCGGAAAGTATATGAAGGCAGCTCGTATCA TGTCCTATTGTCAGCTAGAGTTGGATTGCCTATATTCGGATTTGGTAAGCCATGCTGCTG AAGGAGAACATTCTAAGATGGCTCCATTTCGCATATTAAGTTTTGATATTGAATGTGCCG GTCGCAAAGGTCACTTCCCAGAACCAACTCATGATCCCGTTATTCAGATAGCTAACTTGG TCACCCTTCAAGGAGAAGGACAACCTTTTGTACGCAATGTTATGACGCTTAAATCATGTT CTCCCATTGTTGGAGTTGATGTTATGTCATTTGACACAGAGAGGGATGTTCTACTTGCTT GGAGGGATTTCATACGTGAAGTGGACCCTGATATTATTATTGGATACAATATCTGCAAAT TTGACTTACCCTATCTTATTGAGAGAGCTGAAGTTCTTAAGATAGTAGAGTTTCCAATAC TTGGACGAATCAGAAATAGTCGTGTTCGTGTCCGTGACACAACTTTCTCTTCAAGGCAAT ATGGTATGCGTGAAAGTAAAGATGTAGCAGTGGAAGGAAGAGTACAATTTGATCTTCTGC AGGCTATGCAACGGGATTACAAGCTTAGTTCTTATTCATTAAACTCTGTATCTGCACATT TCCTCGGGGAGCAAAAAGAGGATGTTCATCACTCAATTATATCTGATCTTCAAAATGGGA ATTCAGAGACACGAAGACGGCTTGCGGTTTATTGTTTGAAGGATGCCTATCTTCCACAAC GACTGCTAGATAAGTTGATGTATATCTACAACTATGTGGAAATGGCAAGAGTCACTGGAG TTCCCATTTCATTTCTTCTTTCAAGGGGACAGAGCATTAAGGTCCTCTCACAGCTACTCA GGAAAGCAAAACAGAAAAACCTTGTTATACCAAATATAAAGGGTCAAGCGTCTGGACAGG ATACCTTTGAAGGTGCAACTGTTTTGGAGGCAAGGGCTGGATTTTATGAGAAACCCATTG CGACTTTGGACTTTGCTTCGTTGTATCCATCCATCATGATGGCATATAACCTATGCTACT GTACTTTGGTCCCCCCTGAGGATGCCCGCAAACTCAACCTGCCTCCAGAAAGTGTCAACA AAACCCCATCTGGTGAAACATTTGTGAAACCAGATGTGCAAAAGGGTATACTTCCTGAAA TCCTTGAAGAATTGTTGGCTGCTCGGAAAAGGGCGAAAGCAGATTTGAAGGAAGCAAAGG ATCCATTTGAAAGGGCCGTTCTTGATGGTCGTCAGCTTGCCCTAAAAATAAGCGCAAACT CTGTCTATGGTTTTACTGGAGCGACTGTTGGTCAATTACCTTGTTTAGAAATTTCTTCAA GTGTGACCAGCTATGGTCGACAGATGATTGAACATACAAAAAAGCTTGTTGAAGATAAAT TCACGACACTTGGAGGCTATGAGCACAATGCAGAGGTCATCTATGGAGATACTGATTCTG TAATGGTACAGTTCGGTGTTTCTACTGTTGAGGACGCAATGAAGCTAGGAAGAGAAGCTG CAGACTACATTAGTGGAACATTTATTAAGCCCATCAAGCTTGAGTTTGAGAAGATCTATT TCCCTTATCTACTGATTAGCAAGAAGAGATATGCTGGTTTGTACTGGACAAATCCTGAGA AATTTGACAAAATGGACACGAAAGGTATTGAAACAGTGAGAAGGGACAACTGTTTATTAG TAAAGAACCTGGTTACTGAGTGCCTTCATAAAATACTAGTGGACAGAGATGTTCCTGGTG CAGTTCAATATGTCAAGAACACCATTTCTGATCTACTAATGAACCGTGTAGACTTATCTC TTCTAGTTATAACAAAGGGTTTGACTAAAACAGGAGAGGATTATGCTGTCAAAGCTGCCC ATGTGGAGCTTGCTGAGAGAATGCGAAAGAGGGACGCTGCTACTGCTCCTACTGTTGGTG ACCGGGTTCCTTATGTTATAATCAAAGCAGCAAAAGGGGCAAAGGCATATGAGAGGTCAG AAGATCCTATTTATGTTTTGGATAATAACATACCAATAGATCCCCAATACTACCTTGAGA ACCAAATCAGCAAACCACTTTTGAGGATCTTTGAGCCGATTCTGAAGAATGCCAGTAGAG AGCTGCTTCATGGAAGTCACACCAGGGCTGTTTCAATCTCAACTCCTTCAAATAGTGGAA TAATGAAATTTGCAAAGAAACAATTGACATGCCTCGGATGCAAAGCAGTTATAAGTGGTT CCAATCAAACGCTTTGCTTTCATTGCAAGGGAAGAGAAGCAGAGTTATACTGCAAAACTG TAGGAAACGTTTCTGAGCTGGAGATGCTCTTTGGGAGGCTCTGGACGCAGTGCCAGGAGT GCCAAGGCTCCCTTCATCAGGACGTTCTCTGCACAAGCCGGGATTGTCCTATTTTCTACC GCCGAAGAAAGGCGCAGAAGGATATGGCTGAAGCTAGAGTACAGCTTCAACGTTGGGACT TCTGAGTCCTCTCATACTGACGGAGTACTACTTTCCCCAAATATTGCGAAACCATTACTG TGAGGCACGCCATTGCGGGATCATGTGATTGCATCTTCATGCATGATGGCTCTGGCTTGT TTAGTTGGATCGGCTGAAATAGCTTTGTTCTACGGTCAGTTTGTTGTATTTTTAGGTGGT AGGTTATCTGTACCTCTAGCCGCTAACAGGGTAATCTAGTTGCTTCCCTTGGTGCATTGA TGCAGCCATGTGTAAGGTAGATAAACAATTTTTTTTCATCATCTTTTAACTTCATGAGGT GATTGAGGCTGAGAAGCACCCATTCAAG