Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0183700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:4220839:4229441:1 gene:Os11g0183700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein OsSWI3C description:Myb, DNA-binding domain containing protein. (Os11t0183700-01);Hypothetical conserved gene. (Os11t0183700-02)
Sequence	ATGCCGCGGAAGGCCTCGTCGACCTCAGATTCGCGCCTGAAATGGCGGAAGTGGAAGCGG AACCCCACCGCGTCCCCGTCGCCGTCCAACCGCTCGTCGGCCGCCGCCGCCGCGGCGGAC CACTCCGACGACTCCGACTCCGCCGCCGTTAACGAGGACGACGACTCCGCGGTCCCCGAG GACGCCGACGACGAAACCCTAGCCGGGGCGGAGGACCCCGTGCTCGACCTCCGCGAGGCG GAGGTGCTCCCTTCGGCGGAGCCCGTCTCGGCGTTCCCCGTCGCCACCCGACGCGTCGTC AACCGGCCGCACCCGTCCGTCCTCGCCGTCATCGCGGCCGAGCGATCCGCGTGCGCGGGT GAGGGTTCCGCCGCGGTGGCGGCGGCGCCGGTGCTGGAGAACATCTCGTACGGGCAGCAG CAGGTGCTCTCCGGGGTGCTCCCTGACCACGCTTCGCTCGCGACGGACACTGACAAGCCG TCTACCTATGTGTGCACGCCGCCGAATCTTATGGAGGGGCATGGCGTGACCAAGCAGTTC CAGGGTCGCCTACATGTCGTGCCCAAGCACTCAGATTGGTTCTCCCCAGGGATCGTGCAC AGGCTGGAAAGGCAGGTGGTGCCACAGTTCTTTTCAGGGAAGTCGCCGGGCAACACTCCA GAGAAGTACATGCTATTGAGGAATAAGGTTATTGCAAAATATTTAGAGAACCCAAGCAAG AGGCTTGCTTTTGCAGAGTGCCAGGGGCTTGTTGCGAACACAGCTGAATTATATGATCTC AGTAGGATTGTTAGGTTCTTAGACACTTGGGGAATCATCAATTACCTTGCGTCTGGGTCG GTGCACCGGGGTCTAAGGATGGCAACCTCCCTTCTAAGGGAGGAGCCAACCGGGGAGTTG CAACTATTGACTGCGCCACTGAAATCAATTGATGGCCTAATTTTGTTTGATCGACCGAAA TGTAACCTCCAAGCAGAGGACATTTCTTCATTGGCATCAAATTCGGAGGTTGTGGATTTT GATGCTGGACTTGCAGAATTGGATGGAAAGATTAGGGAGCGATTGTCAGAGAGTTCTTGC AGTTATTGCTTACAGCCTTTGACCAGCTTGCACTATCAGTCACTAAAGGAGGCAGATATC GCTCTATGCTCTGATTGCTTCCATGATGCGAGATATATTACTGGGCATTCAAGCTTAGAT TTTCAGAGGATTGATGGGGATAACGATAGATCAGAAAATGATGGGGATAGTTGGACTGAT CAAGAAACGTTATTGCTGTTGGAGGGCATAGAGAAGTACAATGACAACTGGAATAACATT GCAGAGCATGTTGGAACAAAGTCAAAAGCACAATGTATTTACCATTTTATTCGTCTTCCT GTTGAAGATGGTTTGTTAGAGAATATTGAGGTGCCAGATGCATCTGTGCCATTTAGAGCA GAAACCAATGGATACCCACATTTAGATTGCAATGGCAGTACTTCAGGAAATCTACCTCAA AAAATTCCACCTGATAACCAGCTTCCGTTCATTAATTCTTCTAATCCGGTGATGTCACTG GTTGGGTTTTTGGCTTCTGCTATGGGACCAAGAGTTGCAGCATCATGTGCAAGTGCTGCT TTATCAGTTTTGACAGTAGATGATGATTCCAGGGTGAATTCAGAAGGCATTTGCTCTGAT TCTAGGGGCCAAGGTCCGCATCCGAATTTTCGTGATCATAATGGTGGTGTATCTTCATCC ATCTCTCCAGAAAAGGTGAAGCATGCTGCCATGTGTGGTTTGTCGGCAGCAGCTACGAAG GCTAAACTTTTTGCAGATCAAGAGGAACGTGAAATCCAAAGACTAACTGCTACTGTAATA AACCATCAGTTAAAAAGGTTGGAACTGAAGCTGAAGCAGTTTGCCGAAGTCGAGACCTTG CTTTTGAAAGAATGCGAGCAAGTGGAGAGAATAAGGCAGAGGATTGCATCTGACCGTGTC CGAATCGTGTCCACCCGCTTGGCCTCGCCTGGAAATAGCCTACCTGGGGGTAGTACTAGC ACCATGTCATCCAATCCAATGAGTATGAGCCCCAGACCGATGGGCGTGCCAGGCTCGATG CCTCAATCCAGTATGCCAGCACCATTTGCCAATAACATGCAGGGGCATGGTCACCCCCAG ATGGCATTCTTACAACAGCAGCAGCGGCAGCAGATGCTGTCATTTGGACCTCGTCTGCCG CTGTCGGCCATCCAAACCCAGCCATCCCCACAGACGTCAAACATCATGTTCAACCCAGGC ATGCCCAATTCTGTAACCCCTAATCATCATCAACTGTTGAGGTCGTCTTCTGGAAACAAT TCAAGTGTAGGATAG

Peptide Sequence

PEP ID	Os11t0183700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:4220839:4229441:1 gene:Os11g0183700 transcript:Os11t0183700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein OsSWI3C description:Myb, DNA-binding domain containing protein. (Os11t0183700-01);Hypothetical conserved gene. (Os11t0183700-02)
Sequence	MPRKASSTSDSRLKWRKWKRNPTASPSPSNRSSAAAAAADHSDDSDSAAVNEDDDSAVPE DADDETLAGAEDPVLDLREAEVLPSAEPVSAFPVATRRVVNRPHPSVLAVIAAERSACAG EGSAAVAAAPVLENISYGQQQVLSGVLPDHASLATDTDKPSTYVCTPPNLMEGHGVTKQF QGRLHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSK RLAFAECQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLREEPTGEL QLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERLSESSC SYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSWTD QETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDASVPFRA ETNGYPHLDCNGSTSGNLPQKIPPDNQLPFINSSNPVMSLVGFLASAMGPRVAASCASAA LSVLTVDDDSRVNSEGICSDSRGQGPHPNFRDHNGGVSSSISPEKVKHAAMCGLSAAATK AKLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRV RIVSTRLASPGNSLPGGSTSTMSSNPMSMSPRPMGVPGSMPQSSMPAPFANNMQGHGHPQ MAFLQQQQRQQMLSFGPRLPLSAIQTQPSPQTSNIMFNPGMPNSVTPNHHQLLRSSSGNN SSVG

Transcript Sequence

Transcript ID	Os11t0183700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:4220839:4229441:1 gene:Os11g0183700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein OsSWI3C description:Myb, DNA-binding domain containing protein. (Os11t0183700-01);Hypothetical conserved gene. (Os11t0183700-02)
Sequence	AGTACACTGATTCACTCACTCCCGAGTCCCGACCTCCCTCGCACGTGCTTCCCTGCGTCG ACCCCGTCCCGACCCGTCCCCCTCACTCGCCGCCGCCGCCGCCGCCGCCGACGCCGACGC CGAGGACGACGACGACGATGCCGCGGAAGGCCTCGTCGACCTCAGATTCGCGCCTGAAAT GGCGGAAGTGGAAGCGGAACCCCACCGCGTCCCCGTCGCCGTCCAACCGCTCGTCGGCCG CCGCCGCCGCGGCGGACCACTCCGACGACTCCGACTCCGCCGCCGTTAACGAGGACGACG ACTCCGCGGTCCCCGAGGACGCCGACGACGAAACCCTAGCCGGGGCGGAGGACCCCGTGC TCGACCTCCGCGAGGCGGAGGTGCTCCCTTCGGCGGAGCCCGTCTCGGCGTTCCCCGTCG CCACCCGACGCGTCGTCAACCGGCCGCACCCGTCCGTCCTCGCCGTCATCGCGGCCGAGC GATCCGCGTGCGCGGGTGAGGGTTCCGCCGCGGTGGCGGCGGCGCCGGTGCTGGAGAACA TCTCGTACGGGCAGCAGCAGGTGCTCTCCGGGGTGCTCCCTGACCACGCTTCGCTCGCGA CGGACACTGACAAGCCGTCTACCTATGTGTGCACGCCGCCGAATCTTATGGAGGGGCATG GCGTGACCAAGCAGTTCCAGGGTCGCCTACATGTCGTGCCCAAGCACTCAGATTGGTTCT CCCCAGGGATCGTGCACAGGCTGGAAAGGCAGGTGGTGCCACAGTTCTTTTCAGGGAAGT CGCCGGGCAACACTCCAGAGAAGTACATGCTATTGAGGAATAAGGTTATTGCAAAATATT TAGAGAACCCAAGCAAGAGGCTTGCTTTTGCAGAGTGCCAGGGGCTTGTTGCGAACACAG CTGAATTATATGATCTCAGTAGGATTGTTAGGTTCTTAGACACTTGGGGAATCATCAATT ACCTTGCGTCTGGGTCGGTGCACCGGGGTCTAAGGATGGCAACCTCCCTTCTAAGGGAGG AGCCAACCGGGGAGTTGCAACTATTGACTGCGCCACTGAAATCAATTGATGGCCTAATTT TGTTTGATCGACCGAAATGTAACCTCCAAGCAGAGGACATTTCTTCATTGGCATCAAATT CGGAGGTTGTGGATTTTGATGCTGGACTTGCAGAATTGGATGGAAAGATTAGGGAGCGAT TGTCAGAGAGTTCTTGCAGTTATTGCTTACAGCCTTTGACCAGCTTGCACTATCAGTCAC TAAAGGAGGCAGATATCGCTCTATGCTCTGATTGCTTCCATGATGCGAGATATATTACTG GGCATTCAAGCTTAGATTTTCAGAGGATTGATGGGGATAACGATAGATCAGAAAATGATG GGGATAGTTGGACTGATCAAGAAACGTTATTGCTGTTGGAGGGCATAGAGAAGTACAATG ACAACTGGAATAACATTGCAGAGCATGTTGGAACAAAGTCAAAAGCACAATGTATTTACC ATTTTATTCGTCTTCCTGTTGAAGATGGTTTGTTAGAGAATATTGAGGTGCCAGATGCAT CTGTGCCATTTAGAGCAGAAACCAATGGATACCCACATTTAGATTGCAATGGCAGTACTT CAGGAAATCTACCTCAAAAAATTCCACCTGATAACCAGCTTCCGTTCATTAATTCTTCTA ATCCGGTGATGTCACTGGTTGGGTTTTTGGCTTCTGCTATGGGACCAAGAGTTGCAGCAT CATGTGCAAGTGCTGCTTTATCAGTTTTGACAGTAGATGATGATTCCAGGGTGAATTCAG AAGGCATTTGCTCTGATTCTAGGGGCCAAGGTCCGCATCCGAATTTTCGTGATCATAATG GTGGTGTATCTTCATCCATCTCTCCAGAAAAGGTGAAGCATGCTGCCATGTGTGGTTTGT CGGCAGCAGCTACGAAGGCTAAACTTTTTGCAGATCAAGAGGAACGTGAAATCCAAAGAC TAACTGCTACTGTAATAAACCATCAGTTAAAAAGGTTGGAACTGAAGCTGAAGCAGTTTG CCGAAGTCGAGACCTTGCTTTTGAAAGAATGCGAGCAAGTGGAGAGAATAAGGCAGAGGA TTGCATCTGACCGTGTCCGAATCGTGTCCACCCGCTTGGCCTCGCCTGGAAATAGCCTAC CTGGGGGTAGTACTAGCACCATGTCATCCAATCCAATGAGTATGAGCCCCAGACCGATGG GCGTGCCAGGCTCGATGCCTCAATCCAGTATGCCAGCACCATTTGCCAATAACATGCAGG GGCATGGTCACCCCCAGATGGCATTCTTACAACAGCAGCAGCGGCAGCAGATGCTGTCAT TTGGACCTCGTCTGCCGCTGTCGGCCATCCAAACCCAGCCATCCCCACAGACGTCAAACA TCATGTTCAACCCAGGCATGCCCAATTCTGTAACCCCTAATCATCATCAACTGTTGAGGT CGTCTTCTGGAAACAATTCAAGTGTAGGATAGGAGAAAGAAAAAAGGGAGATTCATAAGA TTCCAACCAGTGTAGCTTCCTCAGTTGTAGCTTTATATGATTCATAAACATCTCATTGTT ATTCATTTGTACAATATGTTCCATTGGTCGTATAATTTATGATCACTTAGGTTCTCATTT TATGTATTTATGATCACTTGGGTTCTCATTTTATAGCCTCAAAAGTGTTGTTACG