Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0181100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:4076905:4083472:1 gene:Os11g0181100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transmembrane protein TM9SF3 (Fragment). (Os11t0181100-01)
Sequence	ATGCATCGCCGCGGCGGCCACCACCTCCACCTCCTCCTCGCCGCCGCCGTCGTCCTCCTC CTCACCGTCGCGGGGCTGCCCCTCGCTTCCGCCTCCGAGTCCGACCACAAGTACAAAGCT GAAGAAACGGTTAAACTCTGGGTAAACAAGGTTGGCCCGTACAATAACCCGCAAGAAACT TACAACTATTACAGCCTCCCATTTTGTCAGCCATCTGAAAACCCCGCACACAAATGGGGT GGTCTCGGAGAGGTCCTTGGCGGCAATGAGCTGATCGATAGTCAGGTTGATATAAAGTTT TTAAAAAATGTGGAGAAGGGTCCCATTTGCACAATTGAACTTGATGACAACAAGATTCAA CAATTTACTGATGCCATTGAAAGGTCATATTGGTTTGAACTCTTCATAGATGATCTTCCA TTATGGGGTTTTGTTGGTGAGACTGACAAAAACAACGAAAATAAGCACTACCTCTACACA CACAAGAACATTGTTGTTAAATACAATGGTAACAGGATAATTCATGTCAATCTTACTCAA GAGTCACCTAAGCTTCTTGAAGCTGGCAAAAAATTGGACATGACCTATTCAGTGAAGTGG GTGCAAACAAACGTTGCATTTGCACGACGTTTTGAAGTTTACTTGGACTACCCGTTCTTT GAACATCAGATCCATTGGTTCTCCATCTTCAATTCGTTCATGATGGTTATTTTCTTGACT GGATTGGTATCAATGATATTGATGAGGACGCTGAGAAATGATTATGCGAAATATGCTCGT GAAGATGATGATCTGGAGTCGCTTGAAAGAGATGTTAGTGAGGAATCTGGTTGGAAGCTT GTCCATGGAGATGTTTTCCGGCCTCCTCGTAGCTTGGTGTTTCTTTCTGCTTTTGTTGGT ATTGGCACTCAGCTGGCGGCTCTTATTCTGCTCGTGATTGTATTGGCCATTGTTGGCATG TTATATGTTGGACGAGGAGCTATCATCACGACCTTCATCGTGTGCTACGCCCTTACATCT TTCATTTCTGGATATGTTAGTGGTGGCCTCTACTCAAGGAATGGCGGCAAAAACTGGATA AAGTCTATGATCCTTACTGCATCCCTTTTTCCGTTCTTGTGCTTTTCGATTGGATTGGTG TTGAACACCATTGCTATCTTCTACCGTTCACTGGCAGCCATACCATTTGGCACAATGGTT GTCATATTTGTCCTGTGGGCTTTCATCTCTTTTCCTTTGGTTCTATTGGGAACTGTAGTT GGTAGAAATTGGAGTGGTGCTCCCAACAATCCCTGTCGTGTTAAGACAATTCCACGTCCT ATTCCTGAGAAGAAGTGGTATCTTACACCCTCTGTTATCTCATTGATGGGTGGACTACTC CCCTTCGGCAGCATCTTCATCGAGATGTACTTTGTGTTTACTTCATTCTGGAACTACAAG GTTTATTATGTATATGGTTTCATGCTGCTGGTTTTTGTTATCCTCATAATAGTCACCATA TGTGTCACTATTGTGGGTACTTATTTCTTGTTGAATGCTGAGAATTACCATTGGCAATGG ACATCATTCTTCTCCGCTGCATCTACTGCCTTGTATGTCTACCTATACTCAATATACTAT TATCACGTGAAGACAAAGATGTCTGGCTTCTTCCAGACAAGCTTCTACTTTGGCTACACC TTGATGTTCTGCCTCGGACTAGGAATTCTTTGCGGTGCTGTTGGCTATCTAGGATCTACT CTCTTTGTGAGGAGAATCTACAGAAACATCAAATGCGACTAA

Peptide Sequence

PEP ID	Os11t0181100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:4076905:4083472:1 gene:Os11g0181100 transcript:Os11t0181100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transmembrane protein TM9SF3 (Fragment). (Os11t0181100-01)
Sequence	MHRRGGHHLHLLLAAAVVLLLTVAGLPLASASESDHKYKAEETVKLWVNKVGPYNNPQET YNYYSLPFCQPSENPAHKWGGLGEVLGGNELIDSQVDIKFLKNVEKGPICTIELDDNKIQ QFTDAIERSYWFELFIDDLPLWGFVGETDKNNENKHYLYTHKNIVVKYNGNRIIHVNLTQ ESPKLLEAGKKLDMTYSVKWVQTNVAFARRFEVYLDYPFFEHQIHWFSIFNSFMMVIFLT GLVSMILMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPPRSLVFLSAFVG IGTQLAALILLVIVLAIVGMLYVGRGAIITTFIVCYALTSFISGYVSGGLYSRNGGKNWI KSMILTASLFPFLCFSIGLVLNTIAIFYRSLAAIPFGTMVVIFVLWAFISFPLVLLGTVV GRNWSGAPNNPCRVKTIPRPIPEKKWYLTPSVISLMGGLLPFGSIFIEMYFVFTSFWNYK VYYVYGFMLLVFVILIIVTICVTIVGTYFLLNAENYHWQWTSFFSAASTALYVYLYSIYY YHVKTKMSGFFQTSFYFGYTLMFCLGLGILCGAVGYLGSTLFVRRIYRNIKCD

Transcript Sequence

Transcript ID	Os11t0181100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:4076905:4083472:1 gene:Os11g0181100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Transmembrane protein TM9SF3 (Fragment). (Os11t0181100-01)
Sequence	GCAAAAACACCGAAGGTCCCCGTATGAGGAGGCAGCTCGTGCTCGGGCGGCGAGACTGAG ACGAGACGCGAGACCAAACCCTCCCCTCCCCGACCGCGCCCCGCCCAGATCTCGCCGCCG ACGAGATGCATCGCCGCGGCGGCCACCACCTCCACCTCCTCCTCGCCGCCGCCGTCGTCC TCCTCCTCACCGTCGCGGGGCTGCCCCTCGCTTCCGCCTCCGAGTCCGACCACAAGTACA AAGCTGAAGAAACGGTTAAACTCTGGGTAAACAAGGTTGGCCCGTACAATAACCCGCAAG AAACTTACAACTATTACAGCCTCCCATTTTGTCAGCCATCTGAAAACCCCGCACACAAAT GGGGTGGTCTCGGAGAGGTCCTTGGCGGCAATGAGCTGATCGATAGTCAGGTTGATATAA AGTTTTTAAAAAATGTGGAGAAGGGTCCCATTTGCACAATTGAACTTGATGACAACAAGA TTCAACAATTTACTGATGCCATTGAAAGGTCATATTGGTTTGAACTCTTCATAGATGATC TTCCATTATGGGGTTTTGTTGGTGAGACTGACAAAAACAACGAAAATAAGCACTACCTCT ACACACACAAGAACATTGTTGTTAAATACAATGGTAACAGGATAATTCATGTCAATCTTA CTCAAGAGTCACCTAAGCTTCTTGAAGCTGGCAAAAAATTGGACATGACCTATTCAGTGA AGTGGGTGCAAACAAACGTTGCATTTGCACGACGTTTTGAAGTTTACTTGGACTACCCGT TCTTTGAACATCAGATCCATTGGTTCTCCATCTTCAATTCGTTCATGATGGTTATTTTCT TGACTGGATTGGTATCAATGATATTGATGAGGACGCTGAGAAATGATTATGCGAAATATG CTCGTGAAGATGATGATCTGGAGTCGCTTGAAAGAGATGTTAGTGAGGAATCTGGTTGGA AGCTTGTCCATGGAGATGTTTTCCGGCCTCCTCGTAGCTTGGTGTTTCTTTCTGCTTTTG TTGGTATTGGCACTCAGCTGGCGGCTCTTATTCTGCTCGTGATTGTATTGGCCATTGTTG GCATGTTATATGTTGGACGAGGAGCTATCATCACGACCTTCATCGTGTGCTACGCCCTTA CATCTTTCATTTCTGGATATGTTAGTGGTGGCCTCTACTCAAGGAATGGCGGCAAAAACT GGATAAAGTCTATGATCCTTACTGCATCCCTTTTTCCGTTCTTGTGCTTTTCGATTGGAT TGGTGTTGAACACCATTGCTATCTTCTACCGTTCACTGGCAGCCATACCATTTGGCACAA TGGTTGTCATATTTGTCCTGTGGGCTTTCATCTCTTTTCCTTTGGTTCTATTGGGAACTG TAGTTGGTAGAAATTGGAGTGGTGCTCCCAACAATCCCTGTCGTGTTAAGACAATTCCAC GTCCTATTCCTGAGAAGAAGTGGTATCTTACACCCTCTGTTATCTCATTGATGGGTGGAC TACTCCCCTTCGGCAGCATCTTCATCGAGATGTACTTTGTGTTTACTTCATTCTGGAACT ACAAGGTTTATTATGTATATGGTTTCATGCTGCTGGTTTTTGTTATCCTCATAATAGTCA CCATATGTGTCACTATTGTGGGTACTTATTTCTTGTTGAATGCTGAGAATTACCATTGGC AATGGACATCATTCTTCTCCGCTGCATCTACTGCCTTGTATGTCTACCTATACTCAATAT ACTATTATCACGTGAAGACAAAGATGTCTGGCTTCTTCCAGACAAGCTTCTACTTTGGCT ACACCTTGATGTTCTGCCTCGGACTAGGAATTCTTTGCGGTGCTGTTGGCTATCTAGGAT CTACTCTCTTTGTGAGGAGAATCTACAGAAACATCAAATGCGACTAAATTGCTACTCTGA ACATCAAATGTGACCAAAGGGCTACTCCGTTGCCGATAGATCCTATCAGCGAAGTGTGTG TTGCTGGCGCAGGTCCATTGTGGAGTAATGCTCATAAGATTCTGATCAACTTTTGGAAGC TATACAGGAGATTGTTCTCCCTTTGTTTTACCTTTTCTTTTTATGTTTTTCTTTTACTTC ATTTTTCTTCTTGGAGCTGGCCTCATAAATGTATACCTCATTAGTTCAGGAATTAGTCTC AGTACCGGGAAGTACATTTAGATTCTCATTTTGTGGTGGCCTCTTTTGGCCAGTAGTAGG ATATCATTGATGAATATTGGTGCAGTGTGGATCCAATCCAGTGGCTAGAATTGCCCCTCT TATGAATCGCTATACATCCAATTTTGGCATAGCCTTGTAGTATATGCAAACTAATACATT CAAGTTAGATATATATGGCCTGAATGGGTGAAGTTCTATTTCTTCCCCTGCAGGTACTGT TGAAACATGAATTCGACATGATTATTATTTAGCCTTTGGTCTGAGTTTTCATCCTTGC