Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0180000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:3994804:3995784:1 gene:Os11g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0180000-01)
Sequence

ATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCGGCGGTTGCGAGG
GCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCAGCATCCTCACCG
ACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCACCGACGGCAGTG
CGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATGATCAACGTCATG
GACGATCCGCTGACGGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGCCGGGCCCAGGGG
CTGTACATGGGCTCAGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATGAACCTGGTGTTC
ACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAACTGCCCCTTCGAC
GACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTCGCCCGCGGCTAC
GCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATTGTCGAGTACAAC
GTCTACGTCATGCACTGA

Peptide Sequence

PEP ID

Os11t0180000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:3994804:3995784:1 gene:Os11g0180000 transcript:Os11t0180000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0180000-01)
Sequence

MEAKGVVVITLVVTLAAVARAARPEETRPGLARRGSASSPTTHLHFYFHDKVSKPSPTAV
RVVDPVDPSSRSFFGMINVMDDPLTEGPEPESKPMGRAQGLYMGSDQAKLGFLQAMNLVF
TDGTYNGSVVTVLGRNCPFDDVREMPVIGGTGAFRFARGYAQARTHTLDLKTGDAIVEYN
VYVMH

Transcript Sequence

Transcript ID

Os11t0180000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:3994804:3995784:1 gene:Os11g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0180000-01)
Sequence

AACACATCAAGTAGTGACACTCACTCACACGATAGCAAGAAGCTAGCTTGGTTGCTCACA
TTGAGCTCAACAATGGAGGCCAAGGGAGTGGTGGTGATCACCCTTGTGGTCACACTTGCG
GCGGTTGCGAGGGCGGCCCGCCCAGAAGAAACCAGGCCGGGCTTGGCCCGCCGCGGGTCA
GCATCCTCACCGACGACTCACCTGCACTTCTACTTCCACGACAAGGTGAGCAAGCCATCA
CCGACGGCAGTGCGGGTGGTGGACCCGGTGGACCCGTCATCGCGGTCCTTCTTTGGGATG
ATCAACGTCATGGACGATCCGCTGACGGAGGGGCCCGAGCCCGAGTCCAAGCCCATGGGC
CGGGCCCAGGGGCTGTACATGGGCTCAGACCAGGCCAAGCTGGGCTTCCTCCAGGCAATG
AACCTGGTGTTCACCGACGGCACCTACAACGGCAGCGTGGTCACCGTGCTCGGCCGCAAC
TGCCCCTTCGACGACGTCCGGGAGATGCCGGTGATCGGCGGCACCGGCGCCTTCCGCTTC
GCCCGCGGCTACGCCCAGGCCAGGACGCACACCCTGGACCTCAAGACCGGCGACGCCATT
GTCGAGTACAACGTCTACGTCATGCACTGATCACAACAAGATGGAGATGATGCTTCACAC
AAAGCGTTTGCATTTCTCTGAATTTTTCACAAGAGTGTTTTTGCCTTCTCCTCTGAAAAT
AATGGCCCTTGTTGAAAGTGATTCACTCAAGAACACAGGGGAGTTTAGTTGCTGCAGTGT
TGATCTTGATACAAAAAAAATGGAGTTCTAGAATCTCTATAAAAGGTGGTTCTTCTTGGT
TTAGTCTTTCAGTAATAACTTTCTTGGTTGCAGTAACACACTATACCGAAGAACACAGAC
AACTTTTAGTTGCAGGCTTAACAAACTTCTGTCATATAATCCTGATTTCTTAAACCAGTG
GGAGCTTTGTTTGTGATGCAT