Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0179000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:3920115:3920826:-1 gene:Os11g0179000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0179000-01)
Sequence

ATGGCGAAGGCGGCTCTCCAGCTGCTTCTGTTACTGTGCGTGGCGGCGGTGGCGTGGGCG
ATGGACGACGGCGGCGGCGGCGGCGCCGGGATGACAAAGATCAAGGTGTACTGGCACGAC
GTGGTGGCGGGGCCGAACCCGACGGCGATCCGGGTGGCGCAGGCGGCGTCGACGAACGCG
TCGTCGACCTACTTCGGCGCGGTGGTGGCCATCGACGACCCGCTGACGAGCTCGCCGGCG
GCGGCGGCGGCGGGGGAGGTGGTGGGGCGCGCGCAGGGGACGTACACGTTCGCCGACCAG
AGGGTGATCGGCCTCCTGATGGACATGAACTTCGTGTTCACCGCCGGCGACCACAACGGC
AGCAGCCTGGCGATCATGGGGCGGAACGAGGTGATGTCGCCGGTGAGGGAGATGAGCGTC
GTCGGCGGCTCCGGCAAGTTCCGCATGGCGAGGGGGTACGCCGAGGCCCGCACCGTCGAC
TCCGGCTTCAAGTCCGGCGAGACCATCGTCGAGTACACCCTCTTCGTCAAGGCGTAG

Peptide Sequence

PEP ID

Os11t0179000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:3920115:3920826:-1 gene:Os11g0179000 transcript:Os11t0179000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0179000-01)
Sequence

MAKAALQLLLLLCVAAVAWAMDDGGGGGAGMTKIKVYWHDVVAGPNPTAIRVAQAASTNA
SSTYFGAVVAIDDPLTSSPAAAAAGEVVGRAQGTYTFADQRVIGLLMDMNFVFTAGDHNG
SSLAIMGRNEVMSPVREMSVVGGSGKFRMARGYAEARTVDSGFKSGETIVEYTLFVKA

Transcript Sequence

Transcript ID

Os11t0179000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:3920115:3920826:-1 gene:Os11g0179000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0179000-01)
Sequence

AGCTCCTCCTTCAGCTTGCTCGATCAGCTCAAGCTCCAGCTGCAGCCATGGCGAAGGCGG
CTCTCCAGCTGCTTCTGTTACTGTGCGTGGCGGCGGTGGCGTGGGCGATGGACGACGGCG
GCGGCGGCGGCGCCGGGATGACAAAGATCAAGGTGTACTGGCACGACGTGGTGGCGGGGC
CGAACCCGACGGCGATCCGGGTGGCGCAGGCGGCGTCGACGAACGCGTCGTCGACCTACT
TCGGCGCGGTGGTGGCCATCGACGACCCGCTGACGAGCTCGCCGGCGGCGGCGGCGGCGG
GGGAGGTGGTGGGGCGCGCGCAGGGGACGTACACGTTCGCCGACCAGAGGGTGATCGGCC
TCCTGATGGACATGAACTTCGTGTTCACCGCCGGCGACCACAACGGCAGCAGCCTGGCGA
TCATGGGGCGGAACGAGGTGATGTCGCCGGTGAGGGAGATGAGCGTCGTCGGCGGCTCCG
GCAAGTTCCGCATGGCGAGGGGGTACGCCGAGGCCCGCACCGTCGACTCCGGCTTCAAGT
CCGGCGAGACCATCGTCGAGTACACCCTCTTCGTCAAGGCGTAGCTAGAAGATGATGAGC
GACATACATAAGCACATTTATGTTTGTTAAACATCGTTTGTTGTTGTAACATGCTTGATT
TATCGATTGTTTATCAAGCTTACAATAAGATAAGCAGCTCCGACTTGCTACG