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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0178800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:3916880:3917635:-1 gene:Os11g0178800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0178800-01)
Sequence

ATGGCGGCGTCACCGGCTTTCCTCGTTCTTGCCGTGCTTCTGTGCGCGGCGGCGGCGGTG
GCGCGGGCGGCGGACGACGGCGCGGCGGGGATGACCAAGTTCAAGGTGTACTTCCACGAC
GTGGTGGGCGGGACGAAGCCGACGGCGATCAGGGTGGCGCAGGCGGCGTCGACGAACGGC
TCCTCCACCTTCTTCGGCGCCGTGGTGGCCATCGACGACCCGCTGACGACCGACGCGGCG
TCGTCGTCGTCGGAGGTGGGGCGCGCCCAGGGGAGCTACACGTTCGCCGACCAGAAGACG
TTCGGCCTCCTCATGAACATGAACTTCGTGTTCACCGCCGGCGACCACAAGGGGAGCACC
CTCGCCATCGTCGGCCGGAACGAGGTGCTCTCGGCGGTGAGGGAGATGAGCATCGTCGGC
GGCTCCGGCAAGTTCCGCATGGCGAGGGGCTACGTCGAGGCCCGCACCGTCGACTCCGGC
GCCAACTCCGGCGAGACCATCGTCGAGTACACCGTCTTCGTCAAGGCGTAG

Peptide Sequence

PEP ID

Os11t0178800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:3916880:3917635:-1 gene:Os11g0178800 transcript:Os11t0178800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0178800-01)
Sequence

MAASPAFLVLAVLLCAAAAVARAADDGAAGMTKFKVYFHDVVGGTKPTAIRVAQAASTNG
SSTFFGAVVAIDDPLTTDAASSSSEVGRAQGSYTFADQKTFGLLMNMNFVFTAGDHKGST
LAIVGRNEVLSAVREMSIVGGSGKFRMARGYVEARTVDSGANSGETIVEYTVFVKA

Transcript Sequence

Transcript ID

Os11t0178800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:3916880:3917635:-1 gene:Os11g0178800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Plant disease resistance response protein family protein. (Os11t0178800-01)
Sequence

ACCTCCTCCCTCCTCCTCATCTTGCTCAGCTCCGGCCATGGCGGCGTCACCGGCTTTCCT
CGTTCTTGCCGTGCTTCTGTGCGCGGCGGCGGCGGTGGCGCGGGCGGCGGACGACGGCGC
GGCGGGGATGACCAAGTTCAAGGTGTACTTCCACGACGTGGTGGGCGGGACGAAGCCGAC
GGCGATCAGGGTGGCGCAGGCGGCGTCGACGAACGGCTCCTCCACCTTCTTCGGCGCCGT
GGTGGCCATCGACGACCCGCTGACGACCGACGCGGCGTCGTCGTCGTCGGAGGTGGGGCG
CGCCCAGGGGAGCTACACGTTCGCCGACCAGAAGACGTTCGGCCTCCTCATGAACATGAA
CTTCGTGTTCACCGCCGGCGACCACAAGGGGAGCACCCTCGCCATCGTCGGCCGGAACGA
GGTGCTCTCGGCGGTGAGGGAGATGAGCATCGTCGGCGGCTCCGGCAAGTTCCGCATGGC
GAGGGGCTACGTCGAGGCCCGCACCGTCGACTCCGGCGCCAACTCCGGCGAGACCATCGT
CGAGTACACCGTCTTCGTCAAGGCGTAGAGAAGAGAGATCTACCTGCAAATTAAAACGCT
ACTGGCAATTATTGAGCGCCGTGTTTGTACGTGCTTAATTAATTGATTAGTCTTTTCATT
CCGAGTGCATTAAATATTGTTTATCATCATCTTTGGTTGATTTTCTGATTGGGTTTCAGT
TGATCTAATTGGAGGGCGAATCGATTTTGTTTGAAT