Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0175500-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3749274:3755132:1 gene:Os11g0175500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0175500-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0175500-02)
Sequence	ATGGACGCCGGCGAGTGCTCCAGCTCCCAGCCCTGCGCGTCCTCCTCGCCGGACGCCGCC GGTGGCGTTTGGGCCAAGCTAGTGCCCTCCGATTCCGCGTTCCCGGAGGTGGAGCTGGCC GAGGACGACGCCGTGGTGTGCTCCCGGGTCACCCCGGACGGCGGCGGGGAGGTGGCCGCG TGGTGCGAGATTAGGCGCGGCGGCGGCGATGGCGACGCGTCGTCGGCGACGATTCGGAAT CTGAGCTCGGATGCAATTATTGTCGATGGAAGAGTGATCCAGCAAGAAGCAGTTGACATC AAACCGGGGAGTGAAATTGTTTCAGGACCCCAGAAAGATGGGCATCTGTTGTACACCTTT GATATAACAGGCCTGAATGACCAGGACAAAACTAATATCAAGATTGTGCTGGATATTGAG AATGCAAAGTGCAGCATATGCTTAAATTTGTGGCATGATGTTGTTACTGTTGCTCCATGC CTCCACAACTTCTGCAACGGTTGCTTCTCTGAGTGGTTAAGAAGGTCTTCAGCTAATTCG CGTGATAAAAGTCAGAGTGCTGCCTGTCCACAATGTAGGACGGCAGTGCAATCAGTTGGT AGGAATCACTTCCTACATAATATTGAAGAGGCTATACTGCAAGCTTTTTCATCGCTACAG CGGTCTGATGAGGAGATTGCATTGTTGGAGTCATATGCCTCGGTCAAGACAAATATTGTT TTGGGGAAACAGAAAATCCAGTCAAGGAAGCGCCGTTTGCCACGTTCAAATGATGAAGCT AACCATACTAACCATGCTGATTTTCTATGCCCTCAATGTGGTGCTGAATTTGGTGGATTT AGGTGCAGTCCAGGTGCTCCACACTTGCCGTGTAATGGATGTGGAGGAATGATGCCAGCC AGACCTGACACCAGTATACCACAAAAATGTTTGGGATGTGATAGGGCATTTTGTGGAGCT TATTGGTGTTCCCAAGGAGTGAATTCAAGTCAGCATAATCCAATCTGTGATCAGGAAACT TTCAAGATGATCTCTCAGCGCCATATCTCTAGTGTTCCTGACACAGTACATGGAGGCAAT CAATACGAGAAAGATATTACAGAAAGATGTATACAGCAATCAGGCAAAGCATTGCAAGCT ATAATCTCAGAGTGGATAGTGAAGTTTGACAATAAGGAGCTTGATCGCTCAAGGCTGCAG CTGAACCATGTTGATGCAATTACTTCTAGGACATACGTCTGCAACCAATGCTACAGCAAG TTCATCGATTTCCTGCTCTACTGGTTCCGTGTATCAATGCCAAGAAATCTCCTTCCACCT GATGCTGCTAACAGGGAGAGCTGCTGGTATGGTTTCATGTGCCGAACCCAGCACCACCGG CCTGACCATGCTAAGAAGCTCAACCATGTCTGTCGTCCAACAAGAGGCAACCCCTAG

Peptide Sequence

PEP ID	Os11t0175500-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3749274:3755132:1 gene:Os11g0175500 transcript:Os11t0175500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0175500-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0175500-02)
Sequence	MDAGECSSSQPCASSSPDAAGGVWAKLVPSDSAFPEVELAEDDAVVCSRVTPDGGGEVAA WCEIRRGGGDGDASSATIRNLSSDAIIVDGRVIQQEAVDIKPGSEIVSGPQKDGHLLYTF DITGLNDQDKTNIKIVLDIENAKCSICLNLWHDVVTVAPCLHNFCNGCFSEWLRRSSANS RDKSQSAACPQCRTAVQSVGRNHFLHNIEEAILQAFSSLQRSDEEIALLESYASVKTNIV LGKQKIQSRKRRLPRSNDEANHTNHADFLCPQCGAEFGGFRCSPGAPHLPCNGCGGMMPA RPDTSIPQKCLGCDRAFCGAYWCSQGVNSSQHNPICDQETFKMISQRHISSVPDTVHGGN QYEKDITERCIQQSGKALQAIISEWIVKFDNKELDRSRLQLNHVDAITSRTYVCNQCYSK FIDFLLYWFRVSMPRNLLPPDAANRESCWYGFMCRTQHHRPDHAKKLNHVCRPTRGNP

Transcript Sequence

Transcript ID	Os11t0175500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3749274:3755132:1 gene:Os11g0175500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RING finger protein description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0175500-01);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0175500-02)
Sequence	GGATTTCCTCCTTCCCTTGCACGCCTCCACGCACCCGTGGCCGGAGAAGAAGACGCCGCC ATGGACGCCGGCGAGTGCTCCAGCTCCCAGCCCTGCGCGTCCTCCTCGCCGGACGCCGCC GGTGGCGTTTGGGCCAAGCTAGTGCCCTCCGATTCCGCGTTCCCGGAGGTGGAGCTGGCC GAGGACGACGCCGTGGTGTGCTCCCGGGTCACCCCGGACGGCGGCGGGGAGGTGGCCGCG TGGTGCGAGATTAGGCGCGGCGGCGGCGATGGCGACGCGTCGTCGGCGACGATTCGGAAT CTGAGCTCGGATGCAATTATTGTCGATGGAAGAGTGATCCAGCAAGAAGCAGTTGACATC AAACCGGGGAGTGAAATTGTTTCAGGACCCCAGAAAGATGGGCATCTGTTGTACACCTTT GATATAACAGGCCTGAATGACCAGGACAAAACTAATATCAAGATTGTGCTGGATATTGAG AATGCAAAGTGCAGCATATGCTTAAATTTGTGGCATGATGTTGTTACTGTTGCTCCATGC CTCCACAACTTCTGCAACGGTTGCTTCTCTGAGTGGTTAAGAAGGTCTTCAGCTAATTCG CGTGATAAAAGTCAGAGTGCTGCCTGTCCACAATGTAGGACGGCAGTGCAATCAGTTGGT AGGAATCACTTCCTACATAATATTGAAGAGGCTATACTGCAAGCTTTTTCATCGCTACAG CGGTCTGATGAGGAGATTGCATTGTTGGAGTCATATGCCTCGGTCAAGACAAATATTGTT TTGGGGAAACAGAAAATCCAGTCAAGGAAGCGCCGTTTGCCACGTTCAAATGATGAAGCT AACCATACTAACCATGCTGATTTTCTATGCCCTCAATGTGGTGCTGAATTTGGTGGATTT AGGTGCAGTCCAGGTGCTCCACACTTGCCGTGTAATGGATGTGGAGGAATGATGCCAGCC AGACCTGACACCAGTATACCACAAAAATGTTTGGGATGTGATAGGGCATTTTGTGGAGCT TATTGGTGTTCCCAAGGAGTGAATTCAAGTCAGCATAATCCAATCTGTGATCAGGAAACT TTCAAGATGATCTCTCAGCGCCATATCTCTAGTGTTCCTGACACAGTACATGGAGGCAAT CAATACGAGAAAGATATTACAGAAAGATGTATACAGCAATCAGGCAAAGCATTGCAAGCT ATAATCTCAGAGTGGATAGTGAAGTTTGACAATAAGGAGCTTGATCGCTCAAGGCTGCAG CTGAACCATGTTGATGCAATTACTTCTAGGACATACGTCTGCAACCAATGCTACAGCAAG TTCATCGATTTCCTGCTCTACTGGTTCCGTGTATCAATGCCAAGAAATCTCCTTCCACCT GATGCTGCTAACAGGGAGAGCTGCTGGTATGGTTTCATGTGCCGAACCCAGCACCACCGG CCTGACCATGCTAAGAAGCTCAACCATGTCTGTCGTCCAACAAGAGGCAACCCCTAGCCT GCCTCGTTCTCTGAAAAAAATCATCTATTTTCAGTGTTCAACAGCAGCATTGTACAGCAA AGAGCAAGTGCCATAGGCTCTGGTTTCTCAGTGTTTAACAGCTCTGTTTGATTAGTAGGA ATGATTGTCAGGTACATCAACCAGTTTCAAATGCCTAAACTGATACAACCTGTTTATCTT