Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0174000-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:3671771:3673435:-1 gene:Os11g0174000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, beta subunit domain containing protein. (Os11t0174000-01);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-02);Coatomer, beta subunit domain containing protein. (Os11t0174000-03);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-04)
Sequence	ATGGAGAAGCCATGCACCCTCCTGGTCCACTTCGACAAGGGCTCCCCCTCCATGGCCAAC GAGATCAAGGCCGACCTCGAGGGCAGCGACGTCGCCGCCAAGGTCGACGCCATGAAGCGC GCCATCATGCTGCTCCTCAACGGCGAGACCCTCCCCCACCTCTTCATCACCGTCGTCCGC TACGTCCTCCCCTCCGAGGACCACACCATCCAGAAGCTCCTCCTCCTCTACCTCGAGATC GTCGACAAGCGCGACGTCGCCTCCGGCAAGGTACTCCCGGAGATGATCCTCATCTGCCAG AACCTCCGCAACAACCTCCAGCACCCCAACGAGTACATCCGCGGGGTCACGCTGCGCTTC CTCTGCCGCCTCAACGAGCCCGAGCTGCTCGAGCCGCTCATCCCGTCCATCCTCGCCAAC CTCGACCACCGCCACCACTTCATCCGCAGGCACGCGCTCTCCGCGATCTCCGCCATCTAC CGCCTCCCGCACGGCGACCAGCTCCTCCCCGACGCGCCCGAGGTCGTCGAGCGCGCGCTC ACCGGGGAGCAGGACGCGTCCGCGCGCCGGAACGGGTTCCTCATGCTCTGCGCCTGCGCG CAGGAGCGCGCCGTCGCGTACCTGCTCACCAACGCCGAGCGCGTCGCCGAGTGGCCTGAT CTCCTCCAGATGGCTGCCGTCGATCTCATCCGCAAGGTCTGCCGCTCGCCCAACCGCGCT GACAAGGGAAGGTATATCAAGATTATCATCTCCCTCCTCTCCGCGCCCAACAGTGCCGTC GTGTACGAGTCCGCCGGCGCGCTCGTGTCGCTGTCGTCGGCGCCCACTGCCGTGCGTGCT GCTGCCAACACCTACTGCCAGCTGCTGTCGTCGCAGAGCGACAACAATGTGAAGCTTATT GTCCTTGACCGCCTGCACGAGCTGCGTGCCTCGCACCGTGATGTCATGGTGGATGTGGTC ATGGATGTGCTGCGTGCGCTATCTAGCCCCAATGTGGATGTCAGGAGGAAGGTGCTTGAT TTGGTGCTTGATCTGCTTACCCCCCGAAATGTGGAGGAGGTGGTGATGTACCTCAAGAAG GAGGTTGTTAAGACACAGGCCGGGGATCTCGAGAAGGGTGGTGAGTACCGGCAGATGCTG GTGCAGGCGATCCATTCCTGCGCTGTCGAGTACCCAGAGGTGGCTGGATCGGTGGTCCAC CTCCTCATGGACTTCCTTGGTGACACTAATGTTGCTGCAGCGGTTGATGTTGTTTTGTTT GTGCGCGAGATCATTGAGACCAACCCCAAGCTCCGTGTGTCAATGATTCAGAGGCTGATT GATACATTTTATCAGATCCGTGCATCCCGTGTCTGCTCATGTGCTCTCTGGATCCTTGGG GAGTACTCCCTTTCACTATCTGAGGTTGAGAGTGCCATTTCCACCATCAAGCAGTGCCTT GGTGATCTGCCATTCTACACTGTCTCTGAGGAAGGAGAATCAACTGATGCGTCAAAGCCA GCCCAGCCTGTGGTGAACTCTGTCACAGTATCTTCTAGGAGGCCTGTTGTTCTTGCAGAT GGTACTTATGCCACACAGAGTGCTGCCAC

Peptide Sequence

PEP ID	Os11t0174000-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:3671771:3673435:-1 gene:Os11g0174000 transcript:Os11t0174000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, beta subunit domain containing protein. (Os11t0174000-01);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-02);Coatomer, beta subunit domain containing protein. (Os11t0174000-03);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-04)
Sequence	MEKPCTLLVHFDKGSPSMANEIKADLEGSDVAAKVDAMKRAIMLLLNGETLPHLFITVVR YVLPSEDHTIQKLLLLYLEIVDKRDVASGKVLPEMILICQNLRNNLQHPNEYIRGVTLRF LCRLNEPELLEPLIPSILANLDHRHHFIRRHALSAISAIYRLPHGDQLLPDAPEVVERAL TGEQDASARRNGFLMLCACAQERAVAYLLTNAERVAEWPDLLQMAAVDLIRKVCRSPNRA DKGRYIKIIISLLSAPNSAVVYESAGALVSLSSAPTAVRAAANTYCQLLSSQSDNNVKLI VLDRLHELRASHRDVMVDVVMDVLRALSSPNVDVRRKVLDLVLDLLTPRNVEEVVMYLKK EVVKTQAGDLEKGGEYRQMLVQAIHSCAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLF VREIIETNPKLRVSMIQRLIDTFYQIRASRVCSCALWILGEYSLSLSEVESAISTIKQCL GDLPFYTVSEEGESTDASKPAQPVVNSVTVSSRRPVVLADGTYATQSAA

Transcript Sequence

Transcript ID	Os11t0174000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3671771:3673435:-1 gene:Os11g0174000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Coatomer, beta subunit domain containing protein. (Os11t0174000-01);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-02);Coatomer, beta subunit domain containing protein. (Os11t0174000-03);Similar to Adaptin N terminal region family protein, expressed. (Os11t0174000-04)
Sequence	ACAGAGCCCAGATCCACCGACCACTCCCCCAGATCCACCCCCCACCGGCGGCCGTGCAGC GGCGGCGTCGGCGGCCATGGAGAAGCCATGCACCCTCCTGGTCCACTTCGACAAGGGCTC CCCCTCCATGGCCAACGAGATCAAGGCCGACCTCGAGGGCAGCGACGTCGCCGCCAAGGT CGACGCCATGAAGCGCGCCATCATGCTGCTCCTCAACGGCGAGACCCTCCCCCACCTCTT CATCACCGTCGTCCGCTACGTCCTCCCCTCCGAGGACCACACCATCCAGAAGCTCCTCCT CCTCTACCTCGAGATCGTCGACAAGCGCGACGTCGCCTCCGGCAAGGTACTCCCGGAGAT GATCCTCATCTGCCAGAACCTCCGCAACAACCTCCAGCACCCCAACGAGTACATCCGCGG GGTCACGCTGCGCTTCCTCTGCCGCCTCAACGAGCCCGAGCTGCTCGAGCCGCTCATCCC GTCCATCCTCGCCAACCTCGACCACCGCCACCACTTCATCCGCAGGCACGCGCTCTCCGC GATCTCCGCCATCTACCGCCTCCCGCACGGCGACCAGCTCCTCCCCGACGCGCCCGAGGT CGTCGAGCGCGCGCTCACCGGGGAGCAGGACGCGTCCGCGCGCCGGAACGGGTTCCTCAT GCTCTGCGCCTGCGCGCAGGAGCGCGCCGTCGCGTACCTGCTCACCAACGCCGAGCGCGT CGCCGAGTGGCCTGATCTCCTCCAGATGGCTGCCGTCGATCTCATCCGCAAGGTCTGCCG CTCGCCCAACCGCGCTGACAAGGGAAGGTATATCAAGATTATCATCTCCCTCCTCTCCGC GCCCAACAGTGCCGTCGTGTACGAGTCCGCCGGCGCGCTCGTGTCGCTGTCGTCGGCGCC CACTGCCGTGCGTGCTGCTGCCAACACCTACTGCCAGCTGCTGTCGTCGCAGAGCGACAA CAATGTGAAGCTTATTGTCCTTGACCGCCTGCACGAGCTGCGTGCCTCGCACCGTGATGT CATGGTGGATGTGGTCATGGATGTGCTGCGTGCGCTATCTAGCCCCAATGTGGATGTCAG GAGGAAGGTGCTTGATTTGGTGCTTGATCTGCTTACCCCCCGAAATGTGGAGGAGGTGGT GATGTACCTCAAGAAGGAGGTTGTTAAGACACAGGCCGGGGATCTCGAGAAGGGTGGTGA GTACCGGCAGATGCTGGTGCAGGCGATCCATTCCTGCGCTGTCGAGTACCCAGAGGTGGC TGGATCGGTGGTCCACCTCCTCATGGACTTCCTTGGTGACACTAATGTTGCTGCAGCGGT TGATGTTGTTTTGTTTGTGCGCGAGATCATTGAGACCAACCCCAAGCTCCGTGTGTCAAT GATTCAGAGGCTGATTGATACATTTTATCAGATCCGTGCATCCCGTGTCTGCTCATGTGC TCTCTGGATCCTTGGGGAGTACTCCCTTTCACTATCTGAGGTTGAGAGTGCCATTTCCAC CATCAAGCAGTGCCTTGGTGATCTGCCATTCTACACTGTCTCTGAGGAAGGAGAATCAAC TGATGCGTCAAAGCCAGCCCAGCCTGTGGTGAACTCTGTCACAGTATCTTCTAGGAGGCC TGTTGTTCTTGCAGATGGTACTTATGCCACACAGAGTGCTGCCAC