Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0173800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3656726:3661466:1 gene:Os11g0173800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os11t0173800-01)
Sequence	ATGAAGATTACTGCAGTTGGACAGTTGATCTTGGTTCTGATGGCTTGCAGCTCACATGCA GTCATCTGCTCAACTTTTGGAAATGGAACAGATCAGCTGTCACTTCTTGAATTCAAGAAG GCAATCAGTCTTGATCCGCAGCAATCCTTGATCTCCTGGAATGATAGCACCAACTACTGC AGCTGGGAAGGTGTCTCATGCAGTCTGAAGAATCCAGGTCGTGTCACCTCCCTTAATCTT ACAAACCGAGCTCTAGTAGGGCACATCTCTCCTTCACTTGGGAACCTAACATTCCTGAAG TATCTTGCACTGCTCAAAAATGCACTCTCTGGAGAAATCCCTCCTTCCCTTGGACATTTG CGTCGCCTCCAGTATCTTTACTTGAGTGGCAACACACTGCAAGGAAGCATACCAAGCTTT GCAAACTGCTCAGAGCTCAAGGTTCTGTGGGTGCACAGGAACAACCTAACTGGGCAGTTT CCTGCAGATTGGCCTCCTAATCTTCAACAGCTGCAACTTTCAATCAATAATCTGACAGGT ACAATCCCTGCTTCTCTTGCCAACATCACCTCACTGAATGTGCTTAGTTGCGTGTATAAT CACATAGAAGGGAACATTCCGAATGAGTTTGCGAAGTTACCCAACCTTCAGACTCTTTAT GTGGGTTCTAATCAACTGTCAGGTAGCTTTCCACAAGTCCTCTTGAATCTTTCTACTCTC ATTAACCTTAGCCTTGGCCTTAATCATCTAAGTGGAGAGGTTCCATCCAATCTCGGTAGC GCTCTGCCCAATCTTGAGATATTTGAATTGCCTGTCAACTTCTTTCATGGGCGTATTCCC AGTTCACTGACAAACGCTTCCAATTTATATTTCCTTGAGTTATCAAATAACAATTTCACC GGATTGGTGCCTAGAACAATTGGGGAACTTAACAAGCTCCAGATGTTGAATCTTGAATGG AATCAGCTCCAAGCACATAGAGAACAAGATTGGGAGTTTCTGCAAAGCTTGGGCAACTGC ACTGAGCTACAAGTTTTCTCCATGACTGGGAACCGTCTACAAGGGCATGTGCCTAGTTCG TTGGGTAACCTTTCTGATCAACTCCAGGAGCTACACTTGGCAGAAAGTAAACTTTCAGGT GATTTTCCTTCAGGTATAGCAAACCTTCAGAACCTGATTATTGTGGCGTTGGGTGCTAAT CTATTTACAGGTGTGCTTCCAGAATGGCTTGGAACCATCAAAACTTTGCAAAAGGTATCT TTGGGTAGCAATTTCTTTACTGGAGCCATCCCATCATCTTTCTCAAATCTGTCTCAATTG GGAGAACTATATTTAGACTCAAACCAGTTAGTTGGCCAATTACCACCAAGCTTTGGAACC CTCCCAATCCTTCAAGTATTGATTGTCTCGAACAATAATCTTCATGGTAGCATACCAAAG GAGATCTTCAGAATTCCAACCATAGTGCAAATTAGCTTATCTTTCAACAATCTAGATGCA CCCCTCCATAATGACATTGGCAAGGCAAAACAACTCACATATCTTCAGCTTTCATCAAAT AATATATCTGGATATATTCCTAGCACTTTGGGTGACTCTGAAAGTTTGGAAGACATAGAG TTGGACCACAACGTTTTCAGTGGAAGCATCCCTGCATCTCTAGAAAACATAAAGACTCTA AAAGTTCTCAACTTGTCTTACAACAACCTGTCTGGATCAATACCGGCATCACTTGGTAAC CTACAACTTGTTGAACAACTAGACCTATCATTCAACAATCTTAAGGGAGAGGTCCCAACA AAAGGTATATTCAAGAACACAACTGCTATAAGGGTTGGTGGAAATCCAGGACTTTGTGGG GGTTCCCTGGAGCTACACCTACTCACTTGTTCTAGCACTCCTTTGAATTCAGTTAAGCAT AAGCAATTTATTTTTCTGAAAGTAGCTCTCCCAATAGCTATCATGACTTCACTTGTCATC GCCATCTCTATTATGTGGTTCTGGAATAGAAAACAAAACAGACAGTCTATTTCTTCACCT TCATTTGGCAGGAAATTTCCCAAAGTTTCTTACAGTGATCTTGTGAGAGCAACAGAGGGA TTCTCTGCATCCAATTTAATTGGCAGAGGAAGATATGGTTCTGTATATCAGGGGAAACTA TTTCCAGAGAGGAATTTGGTTGCCGTGAAAGTCTTCAATCTTGAAACAAGGGGTGCAGGC AAGAGTTTTATCGCAGAATGTAATGCCCTGAAAAATGTGCGACATCGTAATCTAATCACT ATCCTTACTGCATGCTCCAGTATTGATTCATCTGGAAATGATTTTAAAGCCCTAGTGTAT GAATTTATGCCACGAGGGGACTTACATAACTTACTATACTCAACTCGAGATGGCAATGGA TCTTCAAATTTGTCCTATGTTTCCCTTGCTCAAAGATTAAACATCGCGGTGGACGTATCA GATGCATTGGCATACCTACACCATAACCATCAAGGAAGCATTGTTCACAGTGATCTAAAA CCTAGCAACATTCTTCTCGATGATAATATGACAGCTCATGTTGGAGACTTTGGACTAGCA GCATTCAAATCTGATTCCGCAGCATCATCTTTTGGTGACTCAAGTTTGACTTCTTCCTTT GCAATAAAGGGAACCATAGGATATGTTGCTCCAGAATGTGCTGGGGGTGGTCGAGTTTCA ACCGCCTCGGACATCTACAGCTTTGGAATTGTTCTCCTCGAAATATTCATTCGAAGGAAG CCGACAGATGACATGTTCAAGGATGGACTGAGCATCTCAAAGTATACAGAGATCAATTTC CCTGATAAGATGTTGCAGATTGTTGACCCACAGCTGCTCCGAGAACTAGACATCTGCCAA GAAACCTCAATTAATGTTGAGAAAAATGAAGTGTGTTGCCTGCTTTCTGTGCTAAATATT GGACTTCATTGCACCAAGTTGGTCCCGGGCGAGCGCATGAGCATGCAGGAGGTGGCCTCC AAGCTGCATGGAATTAGGGATGAATATCTGAGAGGATACTGA

Peptide Sequence

PEP ID	Os11t0173800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3656726:3661466:1 gene:Os11g0173800 transcript:Os11t0173800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os11t0173800-01)
Sequence	MKITAVGQLILVLMACSSHAVICSTFGNGTDQLSLLEFKKAISLDPQQSLISWNDSTNYC SWEGVSCSLKNPGRVTSLNLTNRALVGHISPSLGNLTFLKYLALLKNALSGEIPPSLGHL RRLQYLYLSGNTLQGSIPSFANCSELKVLWVHRNNLTGQFPADWPPNLQQLQLSINNLTG TIPASLANITSLNVLSCVYNHIEGNIPNEFAKLPNLQTLYVGSNQLSGSFPQVLLNLSTL INLSLGLNHLSGEVPSNLGSALPNLEIFELPVNFFHGRIPSSLTNASNLYFLELSNNNFT GLVPRTIGELNKLQMLNLEWNQLQAHREQDWEFLQSLGNCTELQVFSMTGNRLQGHVPSS LGNLSDQLQELHLAESKLSGDFPSGIANLQNLIIVALGANLFTGVLPEWLGTIKTLQKVS LGSNFFTGAIPSSFSNLSQLGELYLDSNQLVGQLPPSFGTLPILQVLIVSNNNLHGSIPK EIFRIPTIVQISLSFNNLDAPLHNDIGKAKQLTYLQLSSNNISGYIPSTLGDSESLEDIE LDHNVFSGSIPASLENIKTLKVLNLSYNNLSGSIPASLGNLQLVEQLDLSFNNLKGEVPT KGIFKNTTAIRVGGNPGLCGGSLELHLLTCSSTPLNSVKHKQFIFLKVALPIAIMTSLVI AISIMWFWNRKQNRQSISSPSFGRKFPKVSYSDLVRATEGFSASNLIGRGRYGSVYQGKL FPERNLVAVKVFNLETRGAGKSFIAECNALKNVRHRNLITILTACSSIDSSGNDFKALVY EFMPRGDLHNLLYSTRDGNGSSNLSYVSLAQRLNIAVDVSDALAYLHHNHQGSIVHSDLK PSNILLDDNMTAHVGDFGLAAFKSDSAASSFGDSSLTSSFAIKGTIGYVAPECAGGGRVS TASDIYSFGIVLLEIFIRRKPTDDMFKDGLSISKYTEINFPDKMLQIVDPQLLRELDICQ ETSINVEKNEVCCLLSVLNIGLHCTKLVPGERMSMQEVASKLHGIRDEYLRGY

Transcript Sequence

Transcript ID	Os11t0173800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3656726:3661466:1 gene:Os11g0173800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os11t0173800-01)
Sequence	GCGCTGCTCTCCCTCCCAACCTCCTCTCCGGCAACCGGCGGCGCCCGTCCGCCCTCCGGC AAACCCCCGCCGCCGCCGCCGCCGCCTCAAGAGTCGAGTACTTGGCTCCACGCGGCCACT CCTGGTCGACATTGCTTCATCTGCTCCTCACACAGCCTCTCCTACATTCCTCAGGCTCCA CGCGACCCACCTGGATGAGGGCCTCTTCCCGCGCCGCGCGCCGTGCGCCGTCCGGACTCC GGCCGTCCGCCGCCTGCTCCAGCTCGCGGTTCGCGCAGCACACCACAGGGAGTTTCTTAT CCTTTTTTTTTATTGAGAGCGAGAGAGAGCGAAAGAGAGGACGAAGGTTGATTTGGAGTT GGGGAATTTTGTTAATTTGGTGATTTGTTCTAACCTAGGAGGAGCATGGCCGCGTTTCGG AGAAGCTTAAGAAGCGAAGCCTATTTTATTCCACCCGAGTAAAAATGTCCGGAAATCGTG GTGAACAGGTGCCTCTCTTCTAGTTCTTCCTCCCAAGTCAACATTTCACTGCTAATGACT AAACTAGTGCATTTTATATGTTGGAGAATATGTCTTCATGTGTAGAGGATTCGAAATGAT ACTCTGAAATTTGACTCCTAGATGGCGACAATGGAGTCCGAACAAACTTAGGTTAAGCAC GCAGGTTGAATCAGGGTTGCAACTTGCAAGCTTTTGTTTAATCAGTTTATTATTAGATAA TGCAAGCATGCCTTCCAGGTTATCATGTGAAAAAAATTCGGAATGAGATCCTCTGAATTT GACTCTTGGATGGTGACTATGATGTCCAAGTAAAACTAAGCTCAGCACGCGGACTGGATG TAAAAGCTAAGCTCAGCACGCGGACTGGATTAGGTTGCAAACATATTTTCTTTGGTTTTA GATAATGCATACCTTGCTGGTTTCAAGCATTGGTATTCCGTAGTAGGTACAAGATGAGCC CGTCCATGTCTCACTTGCACTAAAAGTTGGTGGGCTAGCCGGCCCGGGTTCGAGACTCAG TGACTCACTCATGCTTAATACCATCGATATGAAAGTACCTCCTTTCGTATCCAGCCTTTT CTTTTTTACTTGCATGGTTGCATTAGTCAACACTGCCACTTCTTTTAAATCTTGCCGATG GAACATAGCAGAAAGCATTTGTCTTCACAAAAAGGAACGTATCACAAGCTATATCATTCA GGTACATCAATTACCAACCACTGAATGTTTGTTTTGCTTGTTTCATTTTTTTTCAGATAG TCTGAATGTCTGAGTATTTGGCAATGTTTCCTGAATATCTGAACTTTCCCCGTTCTATTG TCCATGCATACGAGCAGGATTGATCAATATTCGCCAGAACTTGATTGCCATGAAGATTAC TGCAGTTGGACAGTTGATCTTGGTTCTGATGGCTTGCAGCTCACATGCAGTCATCTGCTC AACTTTTGGAAATGGAACAGATCAGCTGTCACTTCTTGAATTCAAGAAGGCAATCAGTCT TGATCCGCAGCAATCCTTGATCTCCTGGAATGATAGCACCAACTACTGCAGCTGGGAAGG TGTCTCATGCAGTCTGAAGAATCCAGGTCGTGTCACCTCCCTTAATCTTACAAACCGAGC TCTAGTAGGGCACATCTCTCCTTCACTTGGGAACCTAACATTCCTGAAGTATCTTGCACT GCTCAAAAATGCACTCTCTGGAGAAATCCCTCCTTCCCTTGGACATTTGCGTCGCCTCCA GTATCTTTACTTGAGTGGCAACACACTGCAAGGAAGCATACCAAGCTTTGCAAACTGCTC AGAGCTCAAGGTTCTGTGGGTGCACAGGAACAACCTAACTGGGCAGTTTCCTGCAGATTG GCCTCCTAATCTTCAACAGCTGCAACTTTCAATCAATAATCTGACAGGTACAATCCCTGC TTCTCTTGCCAACATCACCTCACTGAATGTGCTTAGTTGCGTGTATAATCACATAGAAGG GAACATTCCGAATGAGTTTGCGAAGTTACCCAACCTTCAGACTCTTTATGTGGGTTCTAA TCAACTGTCAGGTAGCTTTCCACAAGTCCTCTTGAATCTTTCTACTCTCATTAACCTTAG CCTTGGCCTTAATCATCTAAGTGGAGAGGTTCCATCCAATCTCGGTAGCGCTCTGCCCAA TCTTGAGATATTTGAATTGCCTGTCAACTTCTTTCATGGGCGTATTCCCAGTTCACTGAC AAACGCTTCCAATTTATATTTCCTTGAGTTATCAAATAACAATTTCACCGGATTGGTGCC TAGAACAATTGGGGAACTTAACAAGCTCCAGATGTTGAATCTTGAATGGAATCAGCTCCA AGCACATAGAGAACAAGATTGGGAGTTTCTGCAAAGCTTGGGCAACTGCACTGAGCTACA AGTTTTCTCCATGACTGGGAACCGTCTACAAGGGCATGTGCCTAGTTCGTTGGGTAACCT TTCTGATCAACTCCAGGAGCTACACTTGGCAGAAAGTAAACTTTCAGGTGATTTTCCTTC AGGTATAGCAAACCTTCAGAACCTGATTATTGTGGCGTTGGGTGCTAATCTATTTACAGG TGTGCTTCCAGAATGGCTTGGAACCATCAAAACTTTGCAAAAGGTATCTTTGGGTAGCAA TTTCTTTACTGGAGCCATCCCATCATCTTTCTCAAATCTGTCTCAATTGGGAGAACTATA TTTAGACTCAAACCAGTTAGTTGGCCAATTACCACCAAGCTTTGGAACCCTCCCAATCCT TCAAGTATTGATTGTCTCGAACAATAATCTTCATGGTAGCATACCAAAGGAGATCTTCAG AATTCCAACCATAGTGCAAATTAGCTTATCTTTCAACAATCTAGATGCACCCCTCCATAA TGACATTGGCAAGGCAAAACAACTCACATATCTTCAGCTTTCATCAAATAATATATCTGG ATATATTCCTAGCACTTTGGGTGACTCTGAAAGTTTGGAAGACATAGAGTTGGACCACAA CGTTTTCAGTGGAAGCATCCCTGCATCTCTAGAAAACATAAAGACTCTAAAAGTTCTCAA CTTGTCTTACAACAACCTGTCTGGATCAATACCGGCATCACTTGGTAACCTACAACTTGT TGAACAACTAGACCTATCATTCAACAATCTTAAGGGAGAGGTCCCAACAAAAGGTATATT CAAGAACACAACTGCTATAAGGGTTGGTGGAAATCCAGGACTTTGTGGGGGTTCCCTGGA GCTACACCTACTCACTTGTTCTAGCACTCCTTTGAATTCAGTTAAGCATAAGCAATTTAT TTTTCTGAAAGTAGCTCTCCCAATAGCTATCATGACTTCACTTGTCATCGCCATCTCTAT TATGTGGTTCTGGAATAGAAAACAAAACAGACAGTCTATTTCTTCACCTTCATTTGGCAG GAAATTTCCCAAAGTTTCTTACAGTGATCTTGTGAGAGCAACAGAGGGATTCTCTGCATC CAATTTAATTGGCAGAGGAAGATATGGTTCTGTATATCAGGGGAAACTATTTCCAGAGAG GAATTTGGTTGCCGTGAAAGTCTTCAATCTTGAAACAAGGGGTGCAGGCAAGAGTTTTAT CGCAGAATGTAATGCCCTGAAAAATGTGCGACATCGTAATCTAATCACTATCCTTACTGC ATGCTCCAGTATTGATTCATCTGGAAATGATTTTAAAGCCCTAGTGTATGAATTTATGCC ACGAGGGGACTTACATAACTTACTATACTCAACTCGAGATGGCAATGGATCTTCAAATTT GTCCTATGTTTCCCTTGCTCAAAGATTAAACATCGCGGTGGACGTATCAGATGCATTGGC ATACCTACACCATAACCATCAAGGAAGCATTGTTCACAGTGATCTAAAACCTAGCAACAT TCTTCTCGATGATAATATGACAGCTCATGTTGGAGACTTTGGACTAGCAGCATTCAAATC TGATTCCGCAGCATCATCTTTTGGTGACTCAAGTTTGACTTCTTCCTTTGCAATAAAGGG AACCATAGGATATGTTGCTCCAGAATGTGCTGGGGGTGGTCGAGTTTCAACCGCCTCGGA CATCTACAGCTTTGGAATTGTTCTCCTCGAAATATTCATTCGAAGGAAGCCGACAGATGA CATGTTCAAGGATGGACTGAGCATCTCAAAGTATACAGAGATCAATTTCCCTGATAAGAT GTTGCAGATTGTTGACCCACAGCTGCTCCGAGAACTAGACATCTGCCAAGAAACCTCAAT TAATGTTGAGAAAAATGAAGTGTGTTGCCTGCTTTCTGTGCTAAATATTGGACTTCATTG CACCAAGTTGGTCCCGGGCGAGCGCATGAGCATGCAGGAGGTGGCCTCCAAGCTGCATGG AATTAGGGATGAATATCTGAGAGGATACTGAAGAAGCAGATAATAGTTTCAGTTTTTTCC TGAATAACTTGCGAACGAACGATCATTTGTCTGTGTGAGTCACAACTAGAACCAACGAAC ACATGTCACGATTTTGTGCCATGAAAAGTGTTGTTTATGATGCATGGAGTAGAAAATCTC AAATTATGCATAGATCCGGCGCCATCTTCTCAAATGGCACTAATGCATCTAGTACATAAT TT