Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0173500-03
CDS Infomation	cds chromosome:IRGSP-1.0:11:3634792:3638645:1 gene:Os11g0173500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID WEAKNESS I 1 description:Leucine-rich repeat, typical subtype domain containing protein. (Os11t0173500-01);Hypothetical conserved gene. (Os11t0173500-02);Leucine-rich repeat, typical subtype domain containing protein. (Os11t0173500-03)
Sequence	ATGAAGCCTATTGCAATTGGACAGTCGTTCGTTCTGCTACTGGTTTTTAGTACTGTGAGT GTTGTCATTTGCTCTGATGGAAATGAGACAGATCGGCTGTCACTGCTTCAGTTCAAACAG GCTATCAGCCTCGACCCACAGCATGCCTTGCTCTCCTGGAATGATAGCACCCATTTCTGC AGCTGGGAAGGTGTCTCATGTAGTTTGAGGTATCCACGTCGTGTCACTTCCCTTGATCTA TCTAACAGAGGTTTGGTGGGGCTCATATCTCCTTCACTTGGAAACCTGACATCTCTTGAA CACCTCTTCCTGAATACCAATCAACTCAGCGGACAAATCCCTCCGTCACTTGGTCACTTG CATCACCTTCGATCACTTTACTTAGCAAACAACACGCTACAAGGCAACATACCTAGCTTT GCTAATTGTTCTGCTCTCAAAATACTTCATCTAAGCCGCAATCAGATTGTTGGACGTATT CCCAAAAATGTTCATTTACCACCAAGTATTAGTCAACTGATAGTAAACGATAATAACCTT ACTGGTACCATCCCCACTTCACTTGGCGATGTTGCGACACTAAATATACTTATTGTTTCA TACAATTATATTGAAGGCAGTATCCCGGATGAAATTGGAAAGATGCCTGTCTTGACAAAC TTGTATGTGGGTGGAAACAATTTATCTGGTCGATTTCCACTAGCTCTCACAAACATTTCT TCTCTTGTTGAACTGGGACTTGGCTTCAATTATTTTCATGGTGGTCTGCCGCCAAATCTT GGTACTTCTCTACCCAGGCTTCAGGTGCTTGAAATAGCTTCTAATCTCTTTGAAGGACAC CTCCCTTATTCCATTTCAAATGCTACTAGTCTTTACACCATAGACTTTTCAAGCAATTAT TTCTCTGGGGTGGTGCCAAGTTCCATCGGTATGCTTAAGGAGCTTTCCTTGTTGAATCTT GAGTGGAATCAGTTTGAGTCGTTCAATAATAAAGATTTGGAGTTCCTGCACAGCCTAAGC AATTGCACTGACCTTCAAGTGCTGGCACTGTATGACAATAAACTGAAGGGACAGATACCA TATTCATTAGGCAACCTTTCTATCCAGCTTCAGTACCTCTTTCTGGGAAGCAATCAACTA TCAGGGGGCTTTCCCTCTGGCATAAGAAACCTTCCCAACCTGATTTCTCTAGGTTTGAAT GAAAACCATTTTACCGGGATAGTTCCAGAATGGGTTGGCACACTTGCAAATTTGGAAGGC ATATACTTAGATAACAACAAGTTTACAGGTTTTCTTCCATCATCCATATCCAATATATCA AACCTGGAAGATCTCCGCCTTTCCACAAATCTATTTGGAGGAAAAATACCTGCAGGCTTG GGAAAACTCCAAGTCCTTCATCTAATGGAACTTTCTGATAACAATCTCCTTGGCAGCATA CCAGAGAGCATTTTCAGCATTCCAACGTTGACACGTTGTATGCTATCTTTCAACAAACTA GACGGGGCACTTCCCACTGAAATTGGCAATGCCAAGCAACTTGGATCTCTGCATCTATCA GCAAATAAGCTTACTGGGCATATTCCTAGCACCTTGAGTAACTGTGATAGTTTGGAAGAA CTACACTTAGATCAAAATTTTCTTAATGGAAGCATCCCCACATCATTAGGAAATATGCAA AGCTTAACAGCAGTCAACCTGTCTTATAATGACCTATCAGGATCCATACCAGATTCTCTT GGTAGATTGCAATCTCTTGAGCAACTAGATTTGTCATTCAACAATCTGGTAGGAGAAGTC CCAGGCATAGGGGTTTTCAAGAATGCAACTGCCATACGGTTAAACAGAAATCATGGGCTT TGTAATGGGGCACTGGAGCTGGACCTACCCAGATGCGCTACTATATCTTCTAGTGTTAGT AAGCACAAACCATCTCATCTACTCATGTTTTTTGTCCCATTTGCCAGTGTGGTTTCACTA GCTATGGTCACATGTATCATCCTGTTTTGGAGGAAAAAACAGAAAAAAGAATTTGTCTCG TTACCTTCTTTTGGTAAGAAGTTTCCCAAAGTTTCTTATAGGGATCTAGCTAGGGCAACA GATGGGTTCTCTGCATCCAATTTAATTGGCACCGGAAGATATGGTTCAGTATATATGGGG AAGTTATTTCATAGTAAATGTCCAGTTGCTGTGAAAGTCTTCAATCTTGACATAAGAGGA ACACAGAGGAGCTTTATATCAGAATGTAATGCTTTAAGAAATCTTCGGCATCGCAACATT GTACGGATTATAACAGCTTGCTCAACAGTTGATTCGAAAGGAAATGATTTCAAGGCTTTA ATTTATGAATTCATGCCCAGAGGTGACCTGTATCAAGTCCTATATTCAACCTGTGCTGAT GAAAATTCTTCAACTAGCCATTTTGGTTTGGCCCAAAGGGTTAGCATAGTGATGGATATA GCCAATGCATTGGAGTACCTGCACAATCATAACAAAGGAATTATTGTTCATTGCGATCTG AAGCCTAGCAACATTCTCTTGGATGATAATATGACTGCTCATGTTCGTGACTTTGGCCTT TCAAGGTTTGAAATTTATTCCATGACATCATCTTTTGGTTGCTCAACTTCTTCAGTTGCA ATCAGTGGAACCATAGGATATGTTGCTCCAGAATGCGCAGAGAGTGGTCAAGTTTCAACA GCCACAGATGTTTACAGCTTTGGTGTCGTTCTCCTTGAGATATTCATCCGAAGGAGGCCA ACAGATGACATGTTTAATGATGGACTGAGCATCGCAAAATTTGCAGAGTTGAACCTCCCT GATAGGGTGTTGCAGATTGTTGATCCCCAGCTGCAGCAAGATCTGGAGACTTGCCAAGAA ACCCCGATGGCCATAAAAAAGAAACTCACAGATTGCCTGCTTTCAGTCCTAAGTATTGGT CTTTCTTGTACTAAATCATCCCCGAGTGAACGCAACAGCATGAAGGAGGTGGCTATAGAG TTGCATAGAATTTGGGATGCATATCTCAGAGAAAACTAA

Peptide Sequence

PEP ID	Os11t0173500-03
PEP Infomation	pep chromosome:IRGSP-1.0:11:3634792:3638645:1 gene:Os11g0173500 transcript:Os11t0173500-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID WEAKNESS I 1 description:Leucine-rich repeat, typical subtype domain containing protein. (Os11t0173500-01);Hypothetical conserved gene. (Os11t0173500-02);Leucine-rich repeat, typical subtype domain containing protein. (Os11t0173500-03)
Sequence	MKPIAIGQSFVLLLVFSTVSVVICSDGNETDRLSLLQFKQAISLDPQHALLSWNDSTHFC SWEGVSCSLRYPRRVTSLDLSNRGLVGLISPSLGNLTSLEHLFLNTNQLSGQIPPSLGHL HHLRSLYLANNTLQGNIPSFANCSALKILHLSRNQIVGRIPKNVHLPPSISQLIVNDNNL TGTIPTSLGDVATLNILIVSYNYIEGSIPDEIGKMPVLTNLYVGGNNLSGRFPLALTNIS SLVELGLGFNYFHGGLPPNLGTSLPRLQVLEIASNLFEGHLPYSISNATSLYTIDFSSNY FSGVVPSSIGMLKELSLLNLEWNQFESFNNKDLEFLHSLSNCTDLQVLALYDNKLKGQIP YSLGNLSIQLQYLFLGSNQLSGGFPSGIRNLPNLISLGLNENHFTGIVPEWVGTLANLEG IYLDNNKFTGFLPSSISNISNLEDLRLSTNLFGGKIPAGLGKLQVLHLMELSDNNLLGSI PESIFSIPTLTRCMLSFNKLDGALPTEIGNAKQLGSLHLSANKLTGHIPSTLSNCDSLEE LHLDQNFLNGSIPTSLGNMQSLTAVNLSYNDLSGSIPDSLGRLQSLEQLDLSFNNLVGEV PGIGVFKNATAIRLNRNHGLCNGALELDLPRCATISSSVSKHKPSHLLMFFVPFASVVSL AMVTCIILFWRKKQKKEFVSLPSFGKKFPKVSYRDLARATDGFSASNLIGTGRYGSVYMG KLFHSKCPVAVKVFNLDIRGTQRSFISECNALRNLRHRNIVRIITACSTVDSKGNDFKAL IYEFMPRGDLYQVLYSTCADENSSTSHFGLAQRVSIVMDIANALEYLHNHNKGIIVHCDL KPSNILLDDNMTAHVRDFGLSRFEIYSMTSSFGCSTSSVAISGTIGYVAPECAESGQVST ATDVYSFGVVLLEIFIRRRPTDDMFNDGLSIAKFAELNLPDRVLQIVDPQLQQDLETCQE TPMAIKKKLTDCLLSVLSIGLSCTKSSPSERNSMKEVAIELHRIWDAYLREN

Transcript Sequence

Transcript ID	Os11t0173500-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3634792:3638645:1 gene:Os11g0173500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HYBRID WEAKNESS I 1 description:Leucine-rich repeat, typical subtype domain containing protein. (Os11t0173500-01);Hypothetical conserved gene. (Os11t0173500-02);Leucine-rich repeat, typical subtype domain containing protein. (Os11t0173500-03)
Sequence	ATCTGGAGCAGTGGCTAGAAGTGAATGGACTGCAAATTTGATAGATCCTTCTAGACTGCA GCTGGAAAGATGACCTGCTAGAAGAGGCAGATTTAAGGCTTGATGGATAGAGGAGAGAGG AACCTAGTCCAAATGAAAACACCTATAAGTAAGTAGCAGCTGGCCACAAGTACATGACGA CCTACGCACTGCTGCTGCTCCAACTGGCCTGCATCGTATTCTGCAAGGGTTTGGTTTGTC ACTCACTCCTCATGAGTTAGTTTCTGCCAGAAAGAGTGAAAATTTACCATTGTTGGACTT TTACTGAGGAATATAAATAGCTCTTATGGTAAAACTTTGCATATAATAGGAAGGTGATAC ACAATACTCATAGCGTTGGCATGAAGCCTATTGCAATTGGACAGTCGTTCGTTCTGCTAC TGGTTTTTAGTACTGTGAGTGTTGTCATTTGCTCTGATGGAAATGAGACAGATCGGCTGT CACTGCTTCAGTTCAAACAGGCTATCAGCCTCGACCCACAGCATGCCTTGCTCTCCTGGA ATGATAGCACCCATTTCTGCAGCTGGGAAGGTGTCTCATGTAGTTTGAGGTATCCACGTC GTGTCACTTCCCTTGATCTATCTAACAGAGGTTTGGTGGGGCTCATATCTCCTTCACTTG GAAACCTGACATCTCTTGAACACCTCTTCCTGAATACCAATCAACTCAGCGGACAAATCC CTCCGTCACTTGGTCACTTGCATCACCTTCGATCACTTTACTTAGCAAACAACACGCTAC AAGGCAACATACCTAGCTTTGCTAATTGTTCTGCTCTCAAAATACTTCATCTAAGCCGCA ATCAGATTGTTGGACGTATTCCCAAAAATGTTCATTTACCACCAAGTATTAGTCAACTGA TAGTAAACGATAATAACCTTACTGGTACCATCCCCACTTCACTTGGCGATGTTGCGACAC TAAATATACTTATTGTTTCATACAATTATATTGAAGGCAGTATCCCGGATGAAATTGGAA AGATGCCTGTCTTGACAAACTTGTATGTGGGTGGAAACAATTTATCTGGTCGATTTCCAC TAGCTCTCACAAACATTTCTTCTCTTGTTGAACTGGGACTTGGCTTCAATTATTTTCATG GTGGTCTGCCGCCAAATCTTGGTACTTCTCTACCCAGGCTTCAGGTGCTTGAAATAGCTT CTAATCTCTTTGAAGGACACCTCCCTTATTCCATTTCAAATGCTACTAGTCTTTACACCA TAGACTTTTCAAGCAATTATTTCTCTGGGGTGGTGCCAAGTTCCATCGGTATGCTTAAGG AGCTTTCCTTGTTGAATCTTGAGTGGAATCAGTTTGAGTCGTTCAATAATAAAGATTTGG AGTTCCTGCACAGCCTAAGCAATTGCACTGACCTTCAAGTGCTGGCACTGTATGACAATA AACTGAAGGGACAGATACCATATTCATTAGGCAACCTTTCTATCCAGCTTCAGTACCTCT TTCTGGGAAGCAATCAACTATCAGGGGGCTTTCCCTCTGGCATAAGAAACCTTCCCAACC TGATTTCTCTAGGTTTGAATGAAAACCATTTTACCGGGATAGTTCCAGAATGGGTTGGCA CACTTGCAAATTTGGAAGGCATATACTTAGATAACAACAAGTTTACAGGTTTTCTTCCAT CATCCATATCCAATATATCAAACCTGGAAGATCTCCGCCTTTCCACAAATCTATTTGGAG GAAAAATACCTGCAGGCTTGGGAAAACTCCAAGTCCTTCATCTAATGGAACTTTCTGATA ACAATCTCCTTGGCAGCATACCAGAGAGCATTTTCAGCATTCCAACGTTGACACGTTGTA TGCTATCTTTCAACAAACTAGACGGGGCACTTCCCACTGAAATTGGCAATGCCAAGCAAC TTGGATCTCTGCATCTATCAGCAAATAAGCTTACTGGGCATATTCCTAGCACCTTGAGTA ACTGTGATAGTTTGGAAGAACTACACTTAGATCAAAATTTTCTTAATGGAAGCATCCCCA CATCATTAGGAAATATGCAAAGCTTAACAGCAGTCAACCTGTCTTATAATGACCTATCAG GATCCATACCAGATTCTCTTGGTAGATTGCAATCTCTTGAGCAACTAGATTTGTCATTCA ACAATCTGGTAGGAGAAGTCCCAGGCATAGGGGTTTTCAAGAATGCAACTGCCATACGGT TAAACAGAAATCATGGGCTTTGTAATGGGGCACTGGAGCTGGACCTACCCAGATGCGCTA CTATATCTTCTAGTGTTAGTAAGCACAAACCATCTCATCTACTCATGTTTTTTGTCCCAT TTGCCAGTGTGGTTTCACTAGCTATGGTCACATGTATCATCCTGTTTTGGAGGAAAAAAC AGAAAAAAGAATTTGTCTCGTTACCTTCTTTTGGTAAGAAGTTTCCCAAAGTTTCTTATA GGGATCTAGCTAGGGCAACAGATGGGTTCTCTGCATCCAATTTAATTGGCACCGGAAGAT ATGGTTCAGTATATATGGGGAAGTTATTTCATAGTAAATGTCCAGTTGCTGTGAAAGTCT TCAATCTTGACATAAGAGGAACACAGAGGAGCTTTATATCAGAATGTAATGCTTTAAGAA ATCTTCGGCATCGCAACATTGTACGGATTATAACAGCTTGCTCAACAGTTGATTCGAAAG GAAATGATTTCAAGGCTTTAATTTATGAATTCATGCCCAGAGGTGACCTGTATCAAGTCC TATATTCAACCTGTGCTGATGAAAATTCTTCAACTAGCCATTTTGGTTTGGCCCAAAGGG TTAGCATAGTGATGGATATAGCCAATGCATTGGAGTACCTGCACAATCATAACAAAGGAA TTATTGTTCATTGCGATCTGAAGCCTAGCAACATTCTCTTGGATGATAATATGACTGCTC ATGTTCGTGACTTTGGCCTTTCAAGGTTTGAAATTTATTCCATGACATCATCTTTTGGTT GCTCAACTTCTTCAGTTGCAATCAGTGGAACCATAGGATATGTTGCTCCAGAATGCGCAG AGAGTGGTCAAGTTTCAACAGCCACAGATGTTTACAGCTTTGGTGTCGTTCTCCTTGAGA TATTCATCCGAAGGAGGCCAACAGATGACATGTTTAATGATGGACTGAGCATCGCAAAAT TTGCAGAGTTGAACCTCCCTGATAGGGTGTTGCAGATTGTTGATCCCCAGCTGCAGCAAG ATCTGGAGACTTGCCAAGAAACCCCGATGGCCATAAAAAAGAAACTCACAGATTGCCTGC TTTCAGTCCTAAGTATTGGTCTTTCTTGTACTAAATCATCCCCGAGTGAACGCAACAGCA TGAAGGAGGTGGCTATAGAGTTGCATAGAATTTGGGATGCATATCTCAGAGAAAACTAAC ACTTTTCCTACTATCAGTTATCGAATTTTTTTTGTGTTAATCAGGAGGTATATACCTCTG ATACTATGATGTATTTATATATATACCTCTCAATACCTTTCTAGAACCACGCAAAACCTC TCTTTTACAGTGTTATATCATTCCAGGC