Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0172150-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:3536690:3539862:1 gene:Os11g0172150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os11t0172150-00)
Sequence	ATGATGGTTATTACAACTGGAAAGATTATCTTGATTTTCTTAGCTTGCACTGCACATGTC GTCACCTGCAGTTCCTTATATGGAAACGAGACAGATCGAGTGGCACTGCTTGAATTCAAG CAGGCAGTCTGTCTTGATCCAAAACAAACCTTGATGTCCTGGAATGACAGCATCCACTTT TGCAATTGGGAAGGCATCTTGTGCAGCTTGAGGATTCCATATCGTGTCACTTCTCTTAAT CTTACAAATCGAGGTTTAGTAGGGCAAATCTCTCCTTCACTTGGAAACCTCACATTTCTA TCAATTCTATCCCTTACAGAGAATTCATTCAGTGGACAAATCCCTGCATCCCTTGGCCAC TTGAACCACCTCCAAACTCTCTGGTTGAGTAACAACACTCTGCAAGGAGTTATACCAGAT TTTACAAATTGTTCCAGTATGAAGGCTCTACGGCTGAATGGCAATAATCTAGTTGGAAAA TTTCCGCAGCTGCCTCATCGCCTTCAAAGTCTGCAACTTTCATACAATCATCTTAGTGGA ACCATTCCTGCTTCTCTTGCTAATATCACAAGGCTAAATGTGCTTACCTGCACATATAAT AACATCCAGGGCGATATCCCACATGAGATCGGAAAGTTATCCAGCCTGCAATTCTTGTAT GTAGGTGCAAATAAGTTGGTTGGCAGGTTTCCACAAGCCATCTTAAACCTTTCTACTCTT ATTGGTCTTAGCCTTGGGTTTAATAATCTAACTGGAGAGGCACCATCCAATCTTGGTAAT TGTCTACCCAACCTTCAGCTACTTGAATTAGAAGACAACTGCTTTCAAGGGCAAATCCCC TCTTCGTTGATAAATGCTTCCAAGCTATATCGTCTTGAGCTAGCAAGCAATAACTTCACC GGTGTGGTGCCTAGATCCATTGGCAAACTAACCAAGCTATCTTGGTTAAATCTTCAGTCC AATAAACTTCAAGCTCGTAACAAGCAAGATTGGGAGTTTCTTGACAGCTTAGCCAACTGC ACTGAGCTGAAAGCTTTCTCGATAGCTAGTAATCATCTAGAAGGACATGTGCCAACTTCA TTAGGTAACCTTTCTGTTCAGCTTGTACAATTGTTTTTGAGTGGAAATCAATTATCAGGT GGTTTTCCTTCTGGCATAGCAAACCTTCCAAACCTGATTTATATTGGACTGGACAACAAC CAGTTTACTGGTGCAGTCCCAAAATGGCTTGGAACTCTCAGTAATTTACAACAGATATTG TTACATGAGAACATGTTTACTGGGTTTATTCCAACATCCCTTTCAAATTTATCTGTACTG GGATCTCTCTGGCTAGACTATAACAAAATTGGAGGACCTTTACCAGCAAGCTTGGGAAAC CTGCAAACGCTTGAAACATTGAGCATTTCAAACAACAAACTCCATGGTAGTGTACCAATG GAGATCTTCAGAATCCCAACAATACGGTTAATTGATTTGTCTTTCAACAACTTTGATGGG CAGCTTAGTGCCAGGGTAGGAAATGCTAAGCAACTCATGTATTTATATCTTTCATCCAAC AATTTATCTGGAGATATTCCTAGTTCACTGGGCAATTGTGAAAGTTTGGAAGGCATCAAA TTGGGCTCGAATATTCTTAGTGGAAGCATTCCTACTTCATTAGGCAACATAAGAAGTCTG AAAGTTCTCAACTTGTCTCACAATAACTTAAGTGGATCAATACATGCTAATCTTGGAAAG TTATGGCTCCTTGAACAAGTAGATTTGTCATTTAACAATCTCAGCGGTGAGATACCAACA GAAGGAATATTCTTGAATGCAACTGCAGTGCACATCAATGGAAATGAGGGTCTTTGTGGC GGGGCACTCAATTTACACCTACCCACATGTTATGTCATGCCTTTGAATTCATCTAGGAGT GAACGATCTATTTTGCTGTATTTGGTGATATTATTTGCTAGCCTGGTGTCAGTTATATTC ATATATCTATTATTGCTCTGGAGGGGAAAACAGAAGAAAAAATGTACATCTTTGACCCCA TTTGATAGCAAATTTCCCAAAGTTTCTTACAATGATCTCGCCAAGGCAACTGAAGGGTTT TCAGCATCTAATATAATTGGAAGAGGAATATACAGTCATGTTTACAAAGGGGAATTGTTC CAAGGCAGAGATGTGGTTGCTGTTAAAGTTTTCAGCCTGGAGACAGAAGGAGCAGAACAT AGTTTTATCACGGAATGCAATGCTTTGAGAAAAGTGCGGCATCGCAATCTAGTTCCTATC TTAACTGTGTGCTCAAGTCTGGATACTAAGGGAAATGATTTCAGAGCCCTGGTGTATAAG TTAATTCCACAAGGAGACTTGTATTCTCTACTGCACTCAACTAGAGATAGTGAGAATGGT TTCACTTCGAACATCATTACATTTTCTCAAAGGCTAAGCATTGTTGTGGACATAGCAGAT GCATTGGAATATCTTCACCATAACAACCAAGAAACTGTTGTTCATTGTGACATAAAGCCT AGCAATATTCTTCTGGACAATGATATGAAAGCTTATGTTGGAGATTTCGGTCTTGCGAGG CTCAAAGCTGATGCTGCAGTACCATCTGTCGGTGACTCAAACTCAACTTCTATGATTGCA ATAAAAGGAACCATTGGATATGTTGCTCCTGAGTATGCATCTGGTGGTCAAGTTTCAACT GCTGCGGATGTTTATAGCTTTGGAATTGTTCTCCTTGAAGTATTCTTACGGAAGGGACCG ACAGATGATATGTTCAAGGATGGTCTGGATATTGCAAAATTCGTTAGTATGAACTTTCCT GACAAGATACTAGATATTGTTGACCCTGTATTACTACAAGACGAACTGGATTGCTCAAAG GAATCTCCAGTTGCCATGAAGGAAATCTTTTCTGAGGGTTTACATTCAGTGCTAAACATT GGACTTTGCTGCACCAAGCAGTCCCCGTACGAGCGCATGGACATGCGAGAAGTGGCTGCA AAGCTACATGGAACAAGGAGGCATATCTCTGAGGCAACTAGGTAA

Peptide Sequence

PEP ID	Os11t0172150-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:3536690:3539862:1 gene:Os11g0172150 transcript:Os11t0172150-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os11t0172150-00)
Sequence	MMVITTGKIILIFLACTAHVVTCSSLYGNETDRVALLEFKQAVCLDPKQTLMSWNDSIHF CNWEGILCSLRIPYRVTSLNLTNRGLVGQISPSLGNLTFLSILSLTENSFSGQIPASLGH LNHLQTLWLSNNTLQGVIPDFTNCSSMKALRLNGNNLVGKFPQLPHRLQSLQLSYNHLSG TIPASLANITRLNVLTCTYNNIQGDIPHEIGKLSSLQFLYVGANKLVGRFPQAILNLSTL IGLSLGFNNLTGEAPSNLGNCLPNLQLLELEDNCFQGQIPSSLINASKLYRLELASNNFT GVVPRSIGKLTKLSWLNLQSNKLQARNKQDWEFLDSLANCTELKAFSIASNHLEGHVPTS LGNLSVQLVQLFLSGNQLSGGFPSGIANLPNLIYIGLDNNQFTGAVPKWLGTLSNLQQIL LHENMFTGFIPTSLSNLSVLGSLWLDYNKIGGPLPASLGNLQTLETLSISNNKLHGSVPM EIFRIPTIRLIDLSFNNFDGQLSARVGNAKQLMYLYLSSNNLSGDIPSSLGNCESLEGIK LGSNILSGSIPTSLGNIRSLKVLNLSHNNLSGSIHANLGKLWLLEQVDLSFNNLSGEIPT EGIFLNATAVHINGNEGLCGGALNLHLPTCYVMPLNSSRSERSILLYLVILFASLVSVIF IYLLLLWRGKQKKKCTSLTPFDSKFPKVSYNDLAKATEGFSASNIIGRGIYSHVYKGELF QGRDVVAVKVFSLETEGAEHSFITECNALRKVRHRNLVPILTVCSSLDTKGNDFRALVYK LIPQGDLYSLLHSTRDSENGFTSNIITFSQRLSIVVDIADALEYLHHNNQETVVHCDIKP SNILLDNDMKAYVGDFGLARLKADAAVPSVGDSNSTSMIAIKGTIGYVAPEYASGGQVST AADVYSFGIVLLEVFLRKGPTDDMFKDGLDIAKFVSMNFPDKILDIVDPVLLQDELDCSK ESPVAMKEIFSEGLHSVLNIGLCCTKQSPYERMDMREVAAKLHGTRRHISEATR

Transcript Sequence

Transcript ID	Os11t0172150-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3536690:3539862:1 gene:Os11g0172150 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Leucine Rich Repeat family protein, expressed. (Os11t0172150-00)
Sequence	ACATGATCCAGATCTACATTTGAACATAGCTAGTCAATAATGATGGTTATTACAACTGGA AAGATTATCTTGATTTTCTTAGCTTGCACTGCACATGTCGTCACCTGCAGTTCCTTATAT GGAAACGAGACAGATCGAGTGGCACTGCTTGAATTCAAGCAGGCAGTCTGTCTTGATCCA AAACAAACCTTGATGTCCTGGAATGACAGCATCCACTTTTGCAATTGGGAAGGCATCTTG TGCAGCTTGAGGATTCCATATCGTGTCACTTCTCTTAATCTTACAAATCGAGGTTTAGTA GGGCAAATCTCTCCTTCACTTGGAAACCTCACATTTCTATCAATTCTATCCCTTACAGAG AATTCATTCAGTGGACAAATCCCTGCATCCCTTGGCCACTTGAACCACCTCCAAACTCTC TGGTTGAGTAACAACACTCTGCAAGGAGTTATACCAGATTTTACAAATTGTTCCAGTATG AAGGCTCTACGGCTGAATGGCAATAATCTAGTTGGAAAATTTCCGCAGCTGCCTCATCGC CTTCAAAGTCTGCAACTTTCATACAATCATCTTAGTGGAACCATTCCTGCTTCTCTTGCT AATATCACAAGGCTAAATGTGCTTACCTGCACATATAATAACATCCAGGGCGATATCCCA CATGAGATCGGAAAGTTATCCAGCCTGCAATTCTTGTATGTAGGTGCAAATAAGTTGGTT GGCAGGTTTCCACAAGCCATCTTAAACCTTTCTACTCTTATTGGTCTTAGCCTTGGGTTT AATAATCTAACTGGAGAGGCACCATCCAATCTTGGTAATTGTCTACCCAACCTTCAGCTA CTTGAATTAGAAGACAACTGCTTTCAAGGGCAAATCCCCTCTTCGTTGATAAATGCTTCC AAGCTATATCGTCTTGAGCTAGCAAGCAATAACTTCACCGGTGTGGTGCCTAGATCCATT GGCAAACTAACCAAGCTATCTTGGTTAAATCTTCAGTCCAATAAACTTCAAGCTCGTAAC AAGCAAGATTGGGAGTTTCTTGACAGCTTAGCCAACTGCACTGAGCTGAAAGCTTTCTCG ATAGCTAGTAATCATCTAGAAGGACATGTGCCAACTTCATTAGGTAACCTTTCTGTTCAG CTTGTACAATTGTTTTTGAGTGGAAATCAATTATCAGGTGGTTTTCCTTCTGGCATAGCA AACCTTCCAAACCTGATTTATATTGGACTGGACAACAACCAGTTTACTGGTGCAGTCCCA AAATGGCTTGGAACTCTCAGTAATTTACAACAGATATTGTTACATGAGAACATGTTTACT GGGTTTATTCCAACATCCCTTTCAAATTTATCTGTACTGGGATCTCTCTGGCTAGACTAT AACAAAATTGGAGGACCTTTACCAGCAAGCTTGGGAAACCTGCAAACGCTTGAAACATTG AGCATTTCAAACAACAAACTCCATGGTAGTGTACCAATGGAGATCTTCAGAATCCCAACA ATACGGTTAATTGATTTGTCTTTCAACAACTTTGATGGGCAGCTTAGTGCCAGGGTAGGA AATGCTAAGCAACTCATGTATTTATATCTTTCATCCAACAATTTATCTGGAGATATTCCT AGTTCACTGGGCAATTGTGAAAGTTTGGAAGGCATCAAATTGGGCTCGAATATTCTTAGT GGAAGCATTCCTACTTCATTAGGCAACATAAGAAGTCTGAAAGTTCTCAACTTGTCTCAC AATAACTTAAGTGGATCAATACATGCTAATCTTGGAAAGTTATGGCTCCTTGAACAAGTA GATTTGTCATTTAACAATCTCAGCGGTGAGATACCAACAGAAGGAATATTCTTGAATGCA ACTGCAGTGCACATCAATGGAAATGAGGGTCTTTGTGGCGGGGCACTCAATTTACACCTA CCCACATGTTATGTCATGCCTTTGAATTCATCTAGGAGTGAACGATCTATTTTGCTGTAT TTGGTGATATTATTTGCTAGCCTGGTGTCAGTTATATTCATATATCTATTATTGCTCTGG AGGGGAAAACAGAAGAAAAAATGTACATCTTTGACCCCATTTGATAGCAAATTTCCCAAA GTTTCTTACAATGATCTCGCCAAGGCAACTGAAGGGTTTTCAGCATCTAATATAATTGGA AGAGGAATATACAGTCATGTTTACAAAGGGGAATTGTTCCAAGGCAGAGATGTGGTTGCT GTTAAAGTTTTCAGCCTGGAGACAGAAGGAGCAGAACATAGTTTTATCACGGAATGCAAT GCTTTGAGAAAAGTGCGGCATCGCAATCTAGTTCCTATCTTAACTGTGTGCTCAAGTCTG GATACTAAGGGAAATGATTTCAGAGCCCTGGTGTATAAGTTAATTCCACAAGGAGACTTG TATTCTCTACTGCACTCAACTAGAGATAGTGAGAATGGTTTCACTTCGAACATCATTACA TTTTCTCAAAGGCTAAGCATTGTTGTGGACATAGCAGATGCATTGGAATATCTTCACCAT AACAACCAAGAAACTGTTGTTCATTGTGACATAAAGCCTAGCAATATTCTTCTGGACAAT GATATGAAAGCTTATGTTGGAGATTTCGGTCTTGCGAGGCTCAAAGCTGATGCTGCAGTA CCATCTGTCGGTGACTCAAACTCAACTTCTATGATTGCAATAAAAGGAACCATTGGATAT GTTGCTCCTGAGTATGCATCTGGTGGTCAAGTTTCAACTGCTGCGGATGTTTATAGCTTT GGAATTGTTCTCCTTGAAGTATTCTTACGGAAGGGACCGACAGATGATATGTTCAAGGAT GGTCTGGATATTGCAAAATTCGTTAGTATGAACTTTCCTGACAAGATACTAGATATTGTT GACCCTGTATTACTACAAGACGAACTGGATTGCTCAAAGGAATCTCCAGTTGCCATGAAG GAAATCTTTTCTGAGGGTTTACATTCAGTGCTAAACATTGGACTTTGCTGCACCAAGCAG TCCCCGTACGAGCGCATGGACATGCGAGAAGTGGCTGCAAAGCTACATGGAACAAGGAGG CATATCTCTGAGGCAACTAGGTAA