Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0171800-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3517802:3522211:1 gene:Os11g0171800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os11t0171800-01)
Sequence	ATGAAGTTTACCACAATCCGGCAGTATCTGTTGGTGCTTATGGCTAGCAGTATAATCAAA ATCATGTGCAGCTCATTATATGGGAACGAGACAGATCGACTCTCACTACTTGAGTTCAAG AAGGCAATCAGTATGGATCCACAGCAAGCCCTGATGTCCTGGAATGACAGTAATTACTTT TGCAGCTGGGAAGGTGTCTCCTGCAGGGTGAAAACTCCACATCGCGTTATCTCTCTAAAC CTCACAAATAGAGGATTAATTGGGCAGATGTCTCCTTCTCTTGGAAACCTAACATTCCTC AAATTTCTCTTTCTACCTGCAAATTCATTTACTGGAGAGATCCCTCAGTCCCTTGGCAAT ATGCATCACCTGCAAATTATCTACTTGAGCAACAACACATTGCAAGGAAAGATACCTAAT CTTGCAAACTGTTCCAACCTCAAGGTGCTATGGCTGAATGGAAACAATCTGGTAGGACAA ATCCCTGCAGATTTGCCTCAACGCTTTCAAAGCTTGCAACTCTCAATCAACAGTCTTACT GGACCCATCCCTGTTTATGTTGCCAATATCACAACGCTGAAAAGGTTTAGTTGTCTGTAT AATAACATCGATGGCAACATACCAGATGATTTTGCAAAGTTACCTGTGTTAGTATACTTG CATCTGGGTGCAAATAAATTGGCAGGTCAGTTTCCACAAGCTATCCTGAATCTTTCTACT CTTGTTGAACTTACCCTTGCTTCCAATCATCTGAGCGGAGAGTTGCCGTCCAATATTGGT GACTCTGTACCAAATCTCCAAAAGTTCCAATTGGGCGGCAACTTCTTTTATGGGCATATC CCAAATTCATTGACAAATGCTTCCAAGTTAAATCTGATCGATATATCAATCAATAGTTTC ACTGGGGTTGTGCCTAGATCCATTGGCAAACTTACCAAACTGTCTTGGTTAAATCTTGAG CTGAATAAATTCCATGCACATAGCCAGAAAGATCTGGAGTTTATGAACAGCTTAGCCAAC TGCACTGAGCTACAAATGTTCTCCATATATGGTAATCGCTTTGAAGGCAATGTGCCAAAT TCTTTTGGAAACCATTCCACTCAACTGCAGTACATACACATGGGATTAAATCAGTTCTCA GGATTAATTCCTTCTGGTATAGCAAACATTCCCAACTTGATTGCTTTAGAATTGGGTGGT AATCTGTTTACAACTGTGATTCCAGATTGGCTTGGAGGTCTCAAAAGCTTGCAGACCCTA AGTTTATTTAACAATTTATTCACTGGACCCATTCCACCATCTCTGTCCAATTTATCTAAT TTGGTAGAACTTGGTCTAAGCACAAACCAGCTCGATGGGTACATACCACCAAGCTTGGGA TACCTCCAAGTGCTTGAGGAATTTACTATTTCCCATAACAATATTAATGGTTGGGTACCA AACGAAATCTTCGGTATTCCAACAATATCATTAATTTGGCTATCATTCAACTATTTAGAG GGAGAACTTCCTTCTGAAGTAGGCAATGCCAAGCAGCTCATGTACTTGCACCTTACATCT AATAAACTGTCTGGAGATATTCCAAGTACTTTGGGTAACTGCGAAAGTTTGGTAGACATC AAGTTGGACCAGAATGTTTTTACTGGAAACATTCCCATAACATTAGGCAACATAAGTAGC CTAAGAGGGCTTAACTTGTCTCACAATAACTTAAGTGGGACAATACCAGTGTCTCTTGGT GACCTAGAACTTCTTCAACAACTAGATTTGTCTTTCAACCATCTTACAGGTCATGTCCCA ACAAAAGGAGTGTTCAAGAATACGACTGCCATACAAATTGATGGGAATCAGGGGCTTTGT GGTGGTATACCAGAGTTACACCTGCTTGAATGTCCTGTCATGCCTTTGAATTCAACCAAG CACAAGCATTCTGTTGGACTGAAAGTAGTGATCCCATTAGCCACAACAGTGTCACTTGCT GTAACAATAGTATTTGCCTTGTTTTTCTGGAGAGAAAAACAGAAGAGGAAATCTGTATCT TTGCCCTCATTTGATAGCAGCTTTCCCAAAGTCTCTTACCACGATCTTGCTAGAGCAACA GATGGATTCTCGGCATCTAATTTAATTGGCAGGGGAAGATACGGTTCTGTATATAAAGCA CAACTGTTTCAGGGTAGAAATGTTGTTGCTGTCAAAGTCTTCAGTCTAGAGACAAAGGGA GCACAAAAGAGCTTCATTGCAGAATGTAATGCTTTGAGAAATGTGCGGCATCGCAATCTA GTTCCTATCCTTACTGCGTGCTCAACTATTGATTCCAGGGGAAATGATTTCAAAGCCTTA GTGTATAAGTTCATGACACGTGGTGACTTGTATGAGTTACTATACTCAACTGGTGATGAT GAGAACACTTCAACTTCAAATCATATTACACTGGCTCAGAGGTTAAGCATTATAGTGGAT GTAGCAGATGCATTGGAGTACCTCCATCACAATAACCAAGGAACTATTGTCCATTGTGAT CTTAAGCCTAGCAATATTCTCTTGGATGATAATATGACAGCTCATGTTGGGGATTTTGGG CTTGCAAGATTGAAAATTGATTCAACAGCATCAACTTCTGCTGATTCAACTTCTTCAATT GCAATAAAGGGCACAATTGGATACATTGCTCCAGAGTGTGCATCAGGTGGTGGTCAAGTT TCAACTGTTGCAGATGTTTATAGCTTTGGGATTATTCTTCTTGAAATATTTCTACGGAAG AGACCAACAGATAATATGTTCAAGGATGGTCTGGACATCGCAAAATATGTTGAGATGAAC TCTCCAGATAGAACACTAAATATTGTTGATCCAGAATTACTAGACGACAAACAATTGCAA GAAATTCCTGTAACCATGAAGGAAAAATGCATTGAGTGTTTAGTTTCAGTGCTAAACACA GGACTTTGCTGCGTTAAGATATCCCCTAATGAGCGCATGGCAATGCAAGAAGTGGCTGCA AGGTTACATGTCATTAAGGAGGCATATGCCAAAGCAATCTCTGGTAATAATGGCATTATT TGTATCATACGGAGTACTATATAA

Peptide Sequence

PEP ID	Os11t0171800-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3517802:3522211:1 gene:Os11g0171800 transcript:Os11t0171800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os11t0171800-01)
Sequence	MKFTTIRQYLLVLMASSIIKIMCSSLYGNETDRLSLLEFKKAISMDPQQALMSWNDSNYF CSWEGVSCRVKTPHRVISLNLTNRGLIGQMSPSLGNLTFLKFLFLPANSFTGEIPQSLGN MHHLQIIYLSNNTLQGKIPNLANCSNLKVLWLNGNNLVGQIPADLPQRFQSLQLSINSLT GPIPVYVANITTLKRFSCLYNNIDGNIPDDFAKLPVLVYLHLGANKLAGQFPQAILNLST LVELTLASNHLSGELPSNIGDSVPNLQKFQLGGNFFYGHIPNSLTNASKLNLIDISINSF TGVVPRSIGKLTKLSWLNLELNKFHAHSQKDLEFMNSLANCTELQMFSIYGNRFEGNVPN SFGNHSTQLQYIHMGLNQFSGLIPSGIANIPNLIALELGGNLFTTVIPDWLGGLKSLQTL SLFNNLFTGPIPPSLSNLSNLVELGLSTNQLDGYIPPSLGYLQVLEEFTISHNNINGWVP NEIFGIPTISLIWLSFNYLEGELPSEVGNAKQLMYLHLTSNKLSGDIPSTLGNCESLVDI KLDQNVFTGNIPITLGNISSLRGLNLSHNNLSGTIPVSLGDLELLQQLDLSFNHLTGHVP TKGVFKNTTAIQIDGNQGLCGGIPELHLLECPVMPLNSTKHKHSVGLKVVIPLATTVSLA VTIVFALFFWREKQKRKSVSLPSFDSSFPKVSYHDLARATDGFSASNLIGRGRYGSVYKA QLFQGRNVVAVKVFSLETKGAQKSFIAECNALRNVRHRNLVPILTACSTIDSRGNDFKAL VYKFMTRGDLYELLYSTGDDENTSTSNHITLAQRLSIIVDVADALEYLHHNNQGTIVHCD LKPSNILLDDNMTAHVGDFGLARLKIDSTASTSADSTSSIAIKGTIGYIAPECASGGGQV STVADVYSFGIILLEIFLRKRPTDNMFKDGLDIAKYVEMNSPDRTLNIVDPELLDDKQLQ EIPVTMKEKCIECLVSVLNTGLCCVKISPNERMAMQEVAARLHVIKEAYAKAISGNNGII CIIRSTI

Transcript Sequence

Transcript ID	Os11t0171800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3517802:3522211:1 gene:Os11g0171800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os11t0171800-01)
Sequence	ATTCAATCGTTCATCCTTTCTTTCCTCTGATCCTCTCTACTGTCCCCTTTCAACCTGTCA TCGCCGCGTCCACCGCAGCGTCGCACCCCGCCGTTGCGCTACGGCTCCTCGGCCTCCTCG CCGGACATCGCTCTCCGGATGTGAGGACTGAGGCGCCGCCGGATCCAACAGCAGCAAGCA AGCCCTGTCTACAGCCTTCCAATCCTTACTGCGTCCTGGCATCCTGCTTGTCTAGGGATT GTTCTTGCTGTATGCCAGAGCTGAGAGGAGAGAGAAAGGGAGGGGAAGAAAGAAGAGGAT GAGGAGGAACAAGAGAAGGAGCAATTAAGAAAGGCAAGTCCTCAGAAAAAGGAAATACCT GATTATTAATTTTTCATGCAGAGTTGGTTAATTGGTCATGAAGTTTACCACAATCCGGCA GTATCTGTTGGTGCTTATGGCTAGCAGTATAATCAAAATCATGTGCAGCTCATTATATGG GAACGAGACAGATCGACTCTCACTACTTGAGTTCAAGAAGGCAATCAGTATGGATCCACA GCAAGCCCTGATGTCCTGGAATGACAGTAATTACTTTTGCAGCTGGGAAGGTGTCTCCTG CAGGGTGAAAACTCCACATCGCGTTATCTCTCTAAACCTCACAAATAGAGGATTAATTGG GCAGATGTCTCCTTCTCTTGGAAACCTAACATTCCTCAAATTTCTCTTTCTACCTGCAAA TTCATTTACTGGAGAGATCCCTCAGTCCCTTGGCAATATGCATCACCTGCAAATTATCTA CTTGAGCAACAACACATTGCAAGGAAAGATACCTAATCTTGCAAACTGTTCCAACCTCAA GGTGCTATGGCTGAATGGAAACAATCTGGTAGGACAAATCCCTGCAGATTTGCCTCAACG CTTTCAAAGCTTGCAACTCTCAATCAACAGTCTTACTGGACCCATCCCTGTTTATGTTGC CAATATCACAACGCTGAAAAGGTTTAGTTGTCTGTATAATAACATCGATGGCAACATACC AGATGATTTTGCAAAGTTACCTGTGTTAGTATACTTGCATCTGGGTGCAAATAAATTGGC AGGTCAGTTTCCACAAGCTATCCTGAATCTTTCTACTCTTGTTGAACTTACCCTTGCTTC CAATCATCTGAGCGGAGAGTTGCCGTCCAATATTGGTGACTCTGTACCAAATCTCCAAAA GTTCCAATTGGGCGGCAACTTCTTTTATGGGCATATCCCAAATTCATTGACAAATGCTTC CAAGTTAAATCTGATCGATATATCAATCAATAGTTTCACTGGGGTTGTGCCTAGATCCAT TGGCAAACTTACCAAACTGTCTTGGTTAAATCTTGAGCTGAATAAATTCCATGCACATAG CCAGAAAGATCTGGAGTTTATGAACAGCTTAGCCAACTGCACTGAGCTACAAATGTTCTC CATATATGGTAATCGCTTTGAAGGCAATGTGCCAAATTCTTTTGGAAACCATTCCACTCA ACTGCAGTACATACACATGGGATTAAATCAGTTCTCAGGATTAATTCCTTCTGGTATAGC AAACATTCCCAACTTGATTGCTTTAGAATTGGGTGGTAATCTGTTTACAACTGTGATTCC AGATTGGCTTGGAGGTCTCAAAAGCTTGCAGACCCTAAGTTTATTTAACAATTTATTCAC TGGACCCATTCCACCATCTCTGTCCAATTTATCTAATTTGGTAGAACTTGGTCTAAGCAC AAACCAGCTCGATGGGTACATACCACCAAGCTTGGGATACCTCCAAGTGCTTGAGGAATT TACTATTTCCCATAACAATATTAATGGTTGGGTACCAAACGAAATCTTCGGTATTCCAAC AATATCATTAATTTGGCTATCATTCAACTATTTAGAGGGAGAACTTCCTTCTGAAGTAGG CAATGCCAAGCAGCTCATGTACTTGCACCTTACATCTAATAAACTGTCTGGAGATATTCC AAGTACTTTGGGTAACTGCGAAAGTTTGGTAGACATCAAGTTGGACCAGAATGTTTTTAC TGGAAACATTCCCATAACATTAGGCAACATAAGTAGCCTAAGAGGGCTTAACTTGTCTCA CAATAACTTAAGTGGGACAATACCAGTGTCTCTTGGTGACCTAGAACTTCTTCAACAACT AGATTTGTCTTTCAACCATCTTACAGGTCATGTCCCAACAAAAGGAGTGTTCAAGAATAC GACTGCCATACAAATTGATGGGAATCAGGGGCTTTGTGGTGGTATACCAGAGTTACACCT GCTTGAATGTCCTGTCATGCCTTTGAATTCAACCAAGCACAAGCATTCTGTTGGACTGAA AGTAGTGATCCCATTAGCCACAACAGTGTCACTTGCTGTAACAATAGTATTTGCCTTGTT TTTCTGGAGAGAAAAACAGAAGAGGAAATCTGTATCTTTGCCCTCATTTGATAGCAGCTT TCCCAAAGTCTCTTACCACGATCTTGCTAGAGCAACAGATGGATTCTCGGCATCTAATTT AATTGGCAGGGGAAGATACGGTTCTGTATATAAAGCACAACTGTTTCAGGGTAGAAATGT TGTTGCTGTCAAAGTCTTCAGTCTAGAGACAAAGGGAGCACAAAAGAGCTTCATTGCAGA ATGTAATGCTTTGAGAAATGTGCGGCATCGCAATCTAGTTCCTATCCTTACTGCGTGCTC AACTATTGATTCCAGGGGAAATGATTTCAAAGCCTTAGTGTATAAGTTCATGACACGTGG TGACTTGTATGAGTTACTATACTCAACTGGTGATGATGAGAACACTTCAACTTCAAATCA TATTACACTGGCTCAGAGGTTAAGCATTATAGTGGATGTAGCAGATGCATTGGAGTACCT CCATCACAATAACCAAGGAACTATTGTCCATTGTGATCTTAAGCCTAGCAATATTCTCTT GGATGATAATATGACAGCTCATGTTGGGGATTTTGGGCTTGCAAGATTGAAAATTGATTC AACAGCATCAACTTCTGCTGATTCAACTTCTTCAATTGCAATAAAGGGCACAATTGGATA CATTGCTCCAGAGTGTGCATCAGGTGGTGGTCAAGTTTCAACTGTTGCAGATGTTTATAG CTTTGGGATTATTCTTCTTGAAATATTTCTACGGAAGAGACCAACAGATAATATGTTCAA GGATGGTCTGGACATCGCAAAATATGTTGAGATGAACTCTCCAGATAGAACACTAAATAT TGTTGATCCAGAATTACTAGACGACAAACAATTGCAAGAAATTCCTGTAACCATGAAGGA AAAATGCATTGAGTGTTTAGTTTCAGTGCTAAACACAGGACTTTGCTGCGTTAAGATATC CCCTAATGAGCGCATGGCAATGCAAGAAGTGGCTGCAAGGTTACATGTCATTAAGGAGGC ATATGCCAAAGCAATCTCTGGTAATAATGGCATTATTTGTATCATACGGAGTACTATATA AATAAGTATGCAAACAGCTGATGCTTGAGGCTTGCATTGCAGATTCGCAGGCAGTTATCA GCGACAAAACTTAGTCGCTGACGAAGTAGAACATCCGGCACATGAGGTTGCATGCTGTTT TTTTCTCTCGTATTTATTGTAAGGATTCTGACGTAATCTGATGGAGAAAGCAGGCATGCA TGCTTGCAGTAGCAAATATGTTATGCTTTTTCCACTGAAAGTTATAAATAAATTTGGCTT TGTGACATTATTGAATTATAATTATGAGAAACTGGATATATTTTGTATTGTTGCC