Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0171700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3506842:3512780:-1 gene:Os11g0171700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Forkhead-associated domain containing protein. (Os11t0171700-01);Hypothetical conserved gene. (Os11t0171700-02)
Sequence	ATGGCGTCGGCGGCGGCGGAGGGGGAGGAGGCCCCGATCGCGGCGTTCGCGGTGTCCAAG GGGGGAGTCGTGCTGAAGAACATCTTCCTCAACGCGCCCCCGTCGCCGCTGCCTGTGGAG GAGGCGGCGCGGGGGCGGGGTGGGGAGGAGGAGGATCCGCCGGTGATGTTCGGGCGGCAC CCGGAGTGCCACGTCCTCGTCGACCACCCCAGCGTCAGCAGGTTCCACCTCGAGGTCCGC TCCCGCCGCCGCCAGCGGCGGATCACCGTCACCGACCTCTCCTCCGTGCATGGGACTTGG ATCTCGGGACGAAGGATCCCACCGAACACTCCGGTGGAGCTGACAGCCGGTGATGTACTG CGGCTTGGGAGCTCGAGGAGGGAATACCGGCTTCACTGGCTGTCGCTCCCGGAAGCATTT GACATGGAGGATCTGCTGCCACCGCTGCTGGAGGAGGATAAGGAGGAGCTTAGTACTTGT CAGGAGGCAAGCAAGCAGTTGGAGCCTGATCAAAAGGAGTCAGCGGATACTGAGACTCAT CAGGAGACAAGCCAACAAGTTGTGTCAGAACAAATTGATTTTCATGCTAATGTGATTCCC TCAGCACCACCTATACCTGAGTTCGCTGATTTATTTGCTCTGGAAGAATCTTCAGTTCCA GAATTTGATGACAGCAGAGAGGGAAGGATTGAGGGAAATTTGATTGAAGAGAACCATGTT ATATATTCTGTTGAATCTTCGATTACACAACCAATGCTTGCCACAGTGGAAGATGCTGGA AGATCAGTCAAGTCAGGCGAAAAGGACACTTCAAATGCCAGGAGGTCCAAGTTGAAGTCA GTCAAAACCCTCCGCATTGAGACTGGCAGAAGCAAGGAAAGAATTACTCCTTTGAGTTAC AGCTATCAGAAAGAAGAAAACCAAAATGAGAATCCTATATGTTCTCAGAACTGTGGGATA GAATGTGAAGCCTGCATGGTTTTGTTTAATAATTCTTATGTCGGAGAAGCTGAAGAAAAG GAAAAGATGAATATCTTGGACAGAATTATGATGGAGGAGAATCAGGAACAGACAAATCAT CTTCAATCCAAAGAATTTGTGCATTATGTTGCCCCTCTGAATTTGGACTATGAAACATTT TCAGATAATGAAAACTGCGTGCTGAGTGTTGCTAAGGAGACAGAGCATAATGATTTCAAC TCTGTGAATTGTATCTCACAAGATTCAGTTTGTGAAAATCCACAGAAGATATCAGAATTA TTGCATTTTGTTTCCCCTCTGGTTTTCAAAGGCGATGACTTCACTGACAGCAAAATCCTA CAGCTTTGTGCTTCTGTACATAAGGAGTTGTCTGGGCCCATCTTAGAAAATCCATTCATG CAAGACATATCTGATGAAAATACAAACAGCAACAAAGACACAGGGCATGAAGGTTTAACC CTTCTTAACTTGGATGCAACTCTCACAAGCAATGAGAATTTTGCTCAAAGTAAGATTTTT GTGGCTCCTGAGGACTCTGAGAGTGAAGGCACAATCAGTGAGAATCTATTTGAAATTTCG AACATGAAAGGAAATGAAGAAAATGAAGAGAACAGTCCATGGGACAAGGAGAACATCACC CCCTTTGTCTCAGGAGATATAATAGTGGAGAGAAGTCAGCTAAGGTTGAAGCCCACTACC ATTTCCCAAGAATTGATGGATTCCATTTCCCCTCTTAATTTGGAACATAACGACTTTTCA GATGATGAAAGTTCCATATTGAGCATTGGAGAACAGATGAATTCAAATGAACTTATCGCC AAGAATCTTATCCCGCTAACTTCAGTTGATGCAAATATGCAGAAGAGCCATGCAGGGTTT ATGACAATTGCACATCTAGATTTCAAAGATAGCATCCTTACAGACGAGGAAACCTCAGTG CTTTCTCCTGAAAAGTATGATACTATATCCCCTGTGAGACAAGGAAACCTGTTCCCAGAC AAAGAGAATGTGACACCAGCCTCCAGGGATCTGAAGCCCATCATTGGTAGGAAGGTTCTT GGACCAAGGGTGGATAATTCGCTGTCTGTAGAATGCACTTCAAAAAGGAGGATCCATAGA CAAGAACCCAATGAATTATCAGCAAAGTCCAAAGTTTGTCACGCAGTAGATGATGATGTT TTCTATTCTGATAAGGAAAATTTGACACCTATATCTTCAGGAGGCATTAAAGCAAGGAGA TGTCTTCCAAAGAGCCTCACAGTGGATGCTGACCAAGATCAAGAGGCCTTCTACTCTGAC AAAGAGAACTTGACGCCAGTATCTTCTGCTTCTCGGAAAACAAAGGATTTGTCTGAAAAC CGTGCACGAATGGAAAGTACTATCACAAAGAAAAGGGTGGTTGATAGGCTCCCCTTCCAG ACACTCTTGTCGAATTCTCCCTTAAGACACACTAGTTCACTTGATAGTACCCAGGTTAAT CCTAGAGCAGTTGATGTGGCAATGAAGTTGGAGGGTGAACTGAATAATGTTCCACACAAA GGACAAGAGTCTGAAAAGACCAAAGAAGGAATGAAAGTCTGGACCATGGTAACTGATATG GAATGTCTTCTTGATGATGAATCTAGGAAGTCCATCATGCTGCTAAGAGGCTTAAAAGGA ACTCAATTGGTCATACCAATGATTGTGATCAGGGAGCTTGAGTGCTTGAAAAAGCGGGAG AGATTGTTCAGAATGTTATCAAAGGCCACCTCCATGCTCCAATGGATCAATGAGTGCATG GAAAAGGAGAGCTGGTGGATCCATGTTCAGAGTTCAACCGAGATGCTGCCAGTAGCACCA ACTCCACCTGCAACCCCTACAGCGCTATGCAACAATGGAGAAAGAGAAATCTCTGCCGGC ACCTTCAATCCGATAGCCTTGTTCTCCCCGAGAAGCTTCTCAGATATCGTCTCCCCGAAA ACAGAAGATCGCGTTCTTGACTGCGCCCTCCTTTTCAACAAACTAAAAGGAAACCAGAAC ATCGTCATCCTGTCCAACAGCGTCACGCTTAAGATCAAAGCTATGGCAGAGGGATTCCCT TGCGAGGGAGCAAAGGAATTCAGGGAGACCCTGGTGAACCCGTGCTCCAGCAGGTTCATG TGGGCGGCCAGCGCGCCGAGAGGTTCAGCCTGGTCGTGCCTGGACGAGACTACCCTGGAG GAGAACTACTACAACAGCCACCATGGAGCCAGGAGGAGGATCCCAAGGCCCATGGAGCCC GCCAAGGGCCTGAAGCTGATCCTGCTGCACAATTCTCACTATGGGCAGGCGACGAACTTC GTCGAGAATCGGCCATTGGCTCCAATGGCCTCGTGGTGA

Peptide Sequence

PEP ID	Os11t0171700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3506842:3512780:-1 gene:Os11g0171700 transcript:Os11t0171700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Forkhead-associated domain containing protein. (Os11t0171700-01);Hypothetical conserved gene. (Os11t0171700-02)
Sequence	MASAAAEGEEAPIAAFAVSKGGVVLKNIFLNAPPSPLPVEEAARGRGGEEEDPPVMFGRH PECHVLVDHPSVSRFHLEVRSRRRQRRITVTDLSSVHGTWISGRRIPPNTPVELTAGDVL RLGSSRREYRLHWLSLPEAFDMEDLLPPLLEEDKEELSTCQEASKQLEPDQKESADTETH QETSQQVVSEQIDFHANVIPSAPPIPEFADLFALEESSVPEFDDSREGRIEGNLIEENHV IYSVESSITQPMLATVEDAGRSVKSGEKDTSNARRSKLKSVKTLRIETGRSKERITPLSY SYQKEENQNENPICSQNCGIECEACMVLFNNSYVGEAEEKEKMNILDRIMMEENQEQTNH LQSKEFVHYVAPLNLDYETFSDNENCVLSVAKETEHNDFNSVNCISQDSVCENPQKISEL LHFVSPLVFKGDDFTDSKILQLCASVHKELSGPILENPFMQDISDENTNSNKDTGHEGLT LLNLDATLTSNENFAQSKIFVAPEDSESEGTISENLFEISNMKGNEENEENSPWDKENIT PFVSGDIIVERSQLRLKPTTISQELMDSISPLNLEHNDFSDDESSILSIGEQMNSNELIA KNLIPLTSVDANMQKSHAGFMTIAHLDFKDSILTDEETSVLSPEKYDTISPVRQGNLFPD KENVTPASRDLKPIIGRKVLGPRVDNSLSVECTSKRRIHRQEPNELSAKSKVCHAVDDDV FYSDKENLTPISSGGIKARRCLPKSLTVDADQDQEAFYSDKENLTPVSSASRKTKDLSEN RARMESTITKKRVVDRLPFQTLLSNSPLRHTSSLDSTQVNPRAVDVAMKLEGELNNVPHK GQESEKTKEGMKVWTMVTDMECLLDDESRKSIMLLRGLKGTQLVIPMIVIRELECLKKRE RLFRMLSKATSMLQWINECMEKESWWIHVQSSTEMLPVAPTPPATPTALCNNGEREISAG TFNPIALFSPRSFSDIVSPKTEDRVLDCALLFNKLKGNQNIVILSNSVTLKIKAMAEGFP CEGAKEFRETLVNPCSSRFMWAASAPRGSAWSCLDETTLEENYYNSHHGARRRIPRPMEP AKGLKLILLHNSHYGQATNFVENRPLAPMASW

Transcript Sequence

Transcript ID	Os11t0171700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3506842:3512780:-1 gene:Os11g0171700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Forkhead-associated domain containing protein. (Os11t0171700-01);Hypothetical conserved gene. (Os11t0171700-02)
Sequence	GTTGCATTTCCGAAGCTTCCAAATCCGAACCCACCCGGCGCCTCCTCTCCCCTCCTCCAA CGTCTCCTCGATCGCGAGATCCCCCGCCTCTACTACTACTAGTCTCCACAGATTTCGTAT CCCCCAAAAAATCCCAACGCTTCAAACCCAGCGAGTCGCGCCGCCGCCTCGTCTCCGATC GCGGCGCACGCGCAGATCGCTAGCCCTGCCTGCAGCATGGCGTCGGCGGCGGCGGAGGGG GAGGAGGCCCCGATCGCGGCGTTCGCGGTGTCCAAGGGGGGAGTCGTGCTGAAGAACATC TTCCTCAACGCGCCCCCGTCGCCGCTGCCTGTGGAGGAGGCGGCGCGGGGGCGGGGTGGG GAGGAGGAGGATCCGCCGGTGATGTTCGGGCGGCACCCGGAGTGCCACGTCCTCGTCGAC CACCCCAGCGTCAGCAGGTTCCACCTCGAGGTCCGCTCCCGCCGCCGCCAGCGGCGGATC ACCGTCACCGACCTCTCCTCCGTGCATGGGACTTGGATCTCGGGACGAAGGATCCCACCG AACACTCCGGTGGAGCTGACAGCCGGTGATGTACTGCGGCTTGGGAGCTCGAGGAGGGAA TACCGGCTTCACTGGCTGTCGCTCCCGGAAGCATTTGACATGGAGGATCTGCTGCCACCG CTGCTGGAGGAGGATAAGGAGGAGCTTAGTACTTGTCAGGAGGCAAGCAAGCAGTTGGAG CCTGATCAAAAGGAGTCAGCGGATACTGAGACTCATCAGGAGACAAGCCAACAAGTTGTG TCAGAACAAATTGATTTTCATGCTAATGTGATTCCCTCAGCACCACCTATACCTGAGTTC GCTGATTTATTTGCTCTGGAAGAATCTTCAGTTCCAGAATTTGATGACAGCAGAGAGGGA AGGATTGAGGGAAATTTGATTGAAGAGAACCATGTTATATATTCTGTTGAATCTTCGATT ACACAACCAATGCTTGCCACAGTGGAAGATGCTGGAAGATCAGTCAAGTCAGGCGAAAAG GACACTTCAAATGCCAGGAGGTCCAAGTTGAAGTCAGTCAAAACCCTCCGCATTGAGACT GGCAGAAGCAAGGAAAGAATTACTCCTTTGAGTTACAGCTATCAGAAAGAAGAAAACCAA AATGAGAATCCTATATGTTCTCAGAACTGTGGGATAGAATGTGAAGCCTGCATGGTTTTG TTTAATAATTCTTATGTCGGAGAAGCTGAAGAAAAGGAAAAGATGAATATCTTGGACAGA ATTATGATGGAGGAGAATCAGGAACAGACAAATCATCTTCAATCCAAAGAATTTGTGCAT TATGTTGCCCCTCTGAATTTGGACTATGAAACATTTTCAGATAATGAAAACTGCGTGCTG AGTGTTGCTAAGGAGACAGAGCATAATGATTTCAACTCTGTGAATTGTATCTCACAAGAT TCAGTTTGTGAAAATCCACAGAAGATATCAGAATTATTGCATTTTGTTTCCCCTCTGGTT TTCAAAGGCGATGACTTCACTGACAGCAAAATCCTACAGCTTTGTGCTTCTGTACATAAG GAGTTGTCTGGGCCCATCTTAGAAAATCCATTCATGCAAGACATATCTGATGAAAATACA AACAGCAACAAAGACACAGGGCATGAAGGTTTAACCCTTCTTAACTTGGATGCAACTCTC ACAAGCAATGAGAATTTTGCTCAAAGTAAGATTTTTGTGGCTCCTGAGGACTCTGAGAGT GAAGGCACAATCAGTGAGAATCTATTTGAAATTTCGAACATGAAAGGAAATGAAGAAAAT GAAGAGAACAGTCCATGGGACAAGGAGAACATCACCCCCTTTGTCTCAGGAGATATAATA GTGGAGAGAAGTCAGCTAAGGTTGAAGCCCACTACCATTTCCCAAGAATTGATGGATTCC ATTTCCCCTCTTAATTTGGAACATAACGACTTTTCAGATGATGAAAGTTCCATATTGAGC ATTGGAGAACAGATGAATTCAAATGAACTTATCGCCAAGAATCTTATCCCGCTAACTTCA GTTGATGCAAATATGCAGAAGAGCCATGCAGGGTTTATGACAATTGCACATCTAGATTTC AAAGATAGCATCCTTACAGACGAGGAAACCTCAGTGCTTTCTCCTGAAAAGTATGATACT ATATCCCCTGTGAGACAAGGAAACCTGTTCCCAGACAAAGAGAATGTGACACCAGCCTCC AGGGATCTGAAGCCCATCATTGGTAGGAAGGTTCTTGGACCAAGGGTGGATAATTCGCTG TCTGTAGAATGCACTTCAAAAAGGAGGATCCATAGACAAGAACCCAATGAATTATCAGCA AAGTCCAAAGTTTGTCACGCAGTAGATGATGATGTTTTCTATTCTGATAAGGAAAATTTG ACACCTATATCTTCAGGAGGCATTAAAGCAAGGAGATGTCTTCCAAAGAGCCTCACAGTG GATGCTGACCAAGATCAAGAGGCCTTCTACTCTGACAAAGAGAACTTGACGCCAGTATCT TCTGCTTCTCGGAAAACAAAGGATTTGTCTGAAAACCGTGCACGAATGGAAAGTACTATC ACAAAGAAAAGGGTGGTTGATAGGCTCCCCTTCCAGACACTCTTGTCGAATTCTCCCTTA AGACACACTAGTTCACTTGATAGTACCCAGGTTAATCCTAGAGCAGTTGATGTGGCAATG AAGTTGGAGGGTGAACTGAATAATGTTCCACACAAAGGACAAGAGTCTGAAAAGACCAAA GAAGGAATGAAAGTCTGGACCATGGTAACTGATATGGAATGTCTTCTTGATGATGAATCT AGGAAGTCCATCATGCTGCTAAGAGGCTTAAAAGGAACTCAATTGGTCATACCAATGATT GTGATCAGGGAGCTTGAGTGCTTGAAAAAGCGGGAGAGATTGTTCAGAATGTTATCAAAG GCCACCTCCATGCTCCAATGGATCAATGAGTGCATGGAAAAGGAGAGCTGGTGGATCCAT GTTCAGAGTTCAACCGAGATGCTGCCAGTAGCACCAACTCCACCTGCAACCCCTACAGCG CTATGCAACAATGGAGAAAGAGAAATCTCTGCCGGCACCTTCAATCCGATAGCCTTGTTC TCCCCGAGAAGCTTCTCAGATATCGTCTCCCCGAAAACAGAAGATCGCGTTCTTGACTGC GCCCTCCTTTTCAACAAACTAAAAGGAAACCAGAACATCGTCATCCTGTCCAACAGCGTC ACGCTTAAGATCAAAGCTATGGCAGAGGGATTCCCTTGCGAGGGAGCAAAGGAATTCAGG GAGACCCTGGTGAACCCGTGCTCCAGCAGGTTCATGTGGGCGGCCAGCGCGCCGAGAGGT TCAGCCTGGTCGTGCCTGGACGAGACTACCCTGGAGGAGAACTACTACAACAGCCACCAT GGAGCCAGGAGGAGGATCCCAAGGCCCATGGAGCCCGCCAAGGGCCTGAAGCTGATCCTG CTGCACAATTCTCACTATGGGCAGGCGACGAACTTCGTCGAGAATCGGCCATTGGCTCCA ATGGCCTCGTGGTGAACTGACGATGGCACGATGCCATTGGGCTCAGTTAGGCCTTGTGTG CCTTTGTATATAGATATTGGATTTCTTCTTCTTCTTGGTATGTGATTAGAGTAACACCGC TGGACTTGTGAGGTGGATTTTGAGGGCGGTGGCTACATTTCTGTTGGTATGATTTCCATG CCTAATGAAAGTCTGAAAGAAACTAGTATGACCTGTGAAAGTTGGAACATGGAATGGCTG TTT