Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0169400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3357459:3359728:1 gene:Os11g0169400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C2H2 type family protein, expressed. (Os11t0169400-01)
Sequence	AAGGAGAAAGACAAGGATGGCAAGAAGATGAGCAGGGTTGGAAGCTGGGGATCCATGGCG TTCTACTCCTCGTCTTCTTCCTCCAGAAGCCAACCAGTGTCTGCAGCAGAAGGCAAGAAT GGTGGCAAGAAGGAGAAGAGGAGGAGCAGCATCAGCAGGAGCATCACGTGTGCCGGATCG ATCTGCAGCACCAAGGAGAGTTCGGTGTCGAGCAGGGGGAGAGGCCGGCGCCGCCGGAGC GGCGGCGGCGGCGGCGGCGATGGCGGCGGCGGAGGGAGCACGTCGAGCAGGTCGCTGATG GGTCCCGGGTACCACGGCGACTCCGCGGCGGCTGTCTCCGCGTCGTCGTCGTTCAACTCT GTGATGACGGCGGCGACATCCGCCACCGCGACCACCACCACCACCACCACCAGCTCGTCG GCAACCTCGCCGCCGTCGGCGCTGTCCTCGCCGCTGTCATCCATCGGCGGCTCGTTCAGG GCGATGCAGATCAGGAAGCTCTCCGGCTGCTACCTCCACTGCCACTCGGTGCTCGACCCG CGCACCCTCGCCGCCGTCGTCTTCTCCTGCCCCGACTGCGACGAGGTGTTCGTCAAGCCC GACTCCCTCGAGCTCCATAGATCAACCAGACACGCAGTTTCAGAGCTCGGGGCGGACGAC ACGAGCAGGAACATCGTGGAGATCATCTTCCAGTCGAGCTGGCTGAAGAAGAACGCGCCG GTGTGCAGGATCGAGAGGATACTCAAGGTGCAGAGCTCGGACAAGACCATCAAGAGGTTC GAGCAGCACAAGGAGGCGGTGAAGGAGAAGGCGAGGAGCGCCGGCGACGAGGCCGGGAGG AACCCCAGGTGCGTCGCCGACGGCAACGAGCTCCTCAGGTTCCACTGCACCACCTTCGCC TGCTCCCTCGGCCTCGCCGGCGGCACCGCCCTCTGCTGCGCCTCCTCGTCGCCGCCGCCG CTGCACTGCAAGCTCTGCAGCATCATCAAAGACGGATTCAGGGTGGATGGCAATGGGAGG ATCACGACGATGGCGACGAGCGGGCGGGCGCACGACACGGCGGAGGTTTCGCCGGACGGC GAGAAGAGGGCGATGCTGGTGTGCAGGGTGGTCGCCGGCAGAGTGAAGAAGCTCCACAGC AGCAATTCTTCAGAGGATCATGACTGTGACTCTGTCAGCCCCTGCTCAGAAGGGGTTTAC TCAGATTTGGATGAACTGTTCGTGTTCAGTCCCAGAGCTATACTTCCTTGCTTTGTTGTC ATATACAGTGGCTACTAG

Peptide Sequence

PEP ID	Os11t0169400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3357459:3359728:1 gene:Os11g0169400 transcript:Os11t0169400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C2H2 type family protein, expressed. (Os11t0169400-01)
Sequence	KEKDKDGKKMSRVGSWGSMAFYSSSSSSRSQPVSAAEGKNGGKKEKRRSSISRSITCAGS ICSTKESSVSSRGRGRRRRSGGGGGGDGGGGGSTSSRSLMGPGYHGDSAAAVSASSSFNS VMTAATSATATTTTTTTSSSATSPPSALSSPLSSIGGSFRAMQIRKLSGCYLHCHSVLDP RTLAAVVFSCPDCDEVFVKPDSLELHRSTRHAVSELGADDTSRNIVEIIFQSSWLKKNAP VCRIERILKVQSSDKTIKRFEQHKEAVKEKARSAGDEAGRNPRCVADGNELLRFHCTTFA CSLGLAGGTALCCASSSPPPLHCKLCSIIKDGFRVDGNGRITTMATSGRAHDTAEVSPDG EKRAMLVCRVVAGRVKKLHSSNSSEDHDCDSVSPCSEGVYSDLDELFVFSPRAILPCFVV IYSGY

Transcript Sequence

Transcript ID	Os11t0169400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3357459:3359728:1 gene:Os11g0169400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C2H2 type family protein, expressed. (Os11t0169400-01)
Sequence	AAGGAGAAAGACAAGGATGGCAAGAAGATGAGCAGGGTTGGAAGCTGGGGATCCATGGCG TTCTACTCCTCGTCTTCTTCCTCCAGAAGCCAACCAGTGTCTGCAGCAGAAGGCAAGAAT GGTGGCAAGAAGGAGAAGAGGAGGAGCAGCATCAGCAGGAGCATCACGTGTGCCGGATCG ATCTGCAGCACCAAGGAGAGTTCGGTGTCGAGCAGGGGGAGAGGCCGGCGCCGCCGGAGC GGCGGCGGCGGCGGCGGCGATGGCGGCGGCGGAGGGAGCACGTCGAGCAGGTCGCTGATG GGTCCCGGGTACCACGGCGACTCCGCGGCGGCTGTCTCCGCGTCGTCGTCGTTCAACTCT GTGATGACGGCGGCGACATCCGCCACCGCGACCACCACCACCACCACCACCAGCTCGTCG GCAACCTCGCCGCCGTCGGCGCTGTCCTCGCCGCTGTCATCCATCGGCGGCTCGTTCAGG GCGATGCAGATCAGGAAGCTCTCCGGCTGCTACCTCCACTGCCACTCGGTGCTCGACCCG CGCACCCTCGCCGCCGTCGTCTTCTCCTGCCCCGACTGCGACGAGGTGTTCGTCAAGCCC GACTCCCTCGAGCTCCATAGATCAACCAGACACGCAGTTTCAGAGCTCGGGGCGGACGAC ACGAGCAGGAACATCGTGGAGATCATCTTCCAGTCGAGCTGGCTGAAGAAGAACGCGCCG GTGTGCAGGATCGAGAGGATACTCAAGGTGCAGAGCTCGGACAAGACCATCAAGAGGTTC GAGCAGCACAAGGAGGCGGTGAAGGAGAAGGCGAGGAGCGCCGGCGACGAGGCCGGGAGG AACCCCAGGTGCGTCGCCGACGGCAACGAGCTCCTCAGGTTCCACTGCACCACCTTCGCC TGCTCCCTCGGCCTCGCCGGCGGCACCGCCCTCTGCTGCGCCTCCTCGTCGCCGCCGCCG CTGCACTGCAAGCTCTGCAGCATCATCAAAGACGGATTCAGGGTGGATGGCAATGGGAGG ATCACGACGATGGCGACGAGCGGGCGGGCGCACGACACGGCGGAGGTTTCGCCGGACGGC GAGAAGAGGGCGATGCTGGTGTGCAGGGTGGTCGCCGGCAGAGTGAAGAAGCTCCACAGC AGCAATTCTTCAGAGGATCATGACTGTGACTCTGTCAGCCCCTGCTCAGAAGGGGTTTAC TCAGATTTGGATGAACTGTTCGTGTTCAGTCCCAGAGCTATACTTCCTTGCTTTGTTGTC ATATACAGTGGCTACTAGATCAAAGAAAACCAGTAGAATAGCTTGATTTTGCCACTGTTC TTAATCTAGTTTCTTTCTCTGTTGTAGGTTGTAGTATGTTTACTTACTTCATGTTCATCA AGTCAGATCATAATGC