Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0169200-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:3342973:3344506:-1 gene:Os11g0169200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:like aux1-5, auxin transporter 5 description:Amino acid transporter, transmembrane domain containing protein. (Os11t0169200-00)
Sequence	ATGGCGTCGGAGAAGGTGGAGACGATCGTGGCGGGCAACTACGTCGAGATGGAGCGTGAA GGCGCCGCCACCGCCGGCGAAGGCGTCGGCGGAGCCGCGGCGGCGTCGGGCAGGCGGCGC GGCAAGCTCGCCGTCTCCAGCCTCTTCTGGCACGGCGGCTCCGTCTACGACGCCTGGTTC AGCTGCGCCTCCAACCAGGTGGCGCAGGTGCTGCTGACGCTGCCCTACTCCTTCTCGCAG CTGGGCATGGCGTCCGGGGTGGCGTTCCAGGTGTTCTACGGGCTGATGGGGTCGTGGACG GCCTACCTCATCAGCGTGCTCTACGTCGAGTACCGGACGCGGCGGGAGCGCGACAAGGTG GACTTCCGCAACCATGTCATCCAGTGGTTCGAGGTGCTCGACGGCCTCCTCGGCCGCCAT TGGCGCAACGCCGGCCTCCTCTTCAACTGCACCTTCCTCCTCTTCGGCTCCGTCATCCAG CTCATCGCCTGCGCCAGCAACATCTACTACATCAACGACCGCCTCGACAAGCGGACATGG ACCTACATCTTCGGGGCTTGCTGCGCCACCACGGTGTTCGTCCCGTCCTTCCACAACTAC CGCGTCTGGTCCTTCCTCGGCCTCCTCATGACGTCCTACACCGCGTGGTACCTCACCGTC GCCGCCGTCGTGCACGGCAAGGTGGATGGGGCGGCGCCGCGCGCCGGGCCGAGCAAGACG ATGGTGCTCTACTTCACCGGCGCCACCAACATCCTCTACACGTTCGGCGGCCACGCCGTG ACGGTGGAGATCATGCACGCCATGTGGAGGCCGCGGCGGTTCAAGATGATCTACCTCGCC GCGACGGCGTACGTGCTGACGCTGACGCTGCCGTCGGCGGCGGCGATGTACTGGGCGTTC GGGGACGCGCTGCTGGACCACTCCAACGCCTTCGCGCTGCTGCCGCGGACGCCGTGGCGC GACGCCGCGGTGGTGCTCATGCTCATCCACCAGTTCATCACCTTCGGCTTCGCCTGCACG CCGCTCTACTTCGTGTGGGAGAAGGCCATCGGCGTCCACGGCGGCGCCGGCGTGCTCCGC CGCGCGGCGGCGAGGCTCCCCGTCGTGCTCCCCATCTGGTTCCTCGCCGTCATCTTCCCC TTCTTCGGCCCCATCAACTCCACCGTCGGATCCTTCCTCGTCAGCTTCACCGTCTACATC ATCCCGGCGATGGCGCACATGGCGACGTTCGCGCCGGCGGCCGCCAGGGAGAACGCCGTC GAGCCGCCGCCGCGCGCGCTCGGCGGCTGGCCGGGGACGTTCGCCGCCAACTGCTTCGTC GTCGCGTGGGTGCTCGTCGTCGGCTTCGGCTTCGGCGGATGGGCGAGCACGGTCAACTTC GTTCGCCAAGTTGACACCTTTGGCCTCTTCACCAAGTGCTACCAGTGCCCTCCAAGACAC TAG

Peptide Sequence

PEP ID	Os11t0169200-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:3342973:3344506:-1 gene:Os11g0169200 transcript:Os11t0169200-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:like aux1-5, auxin transporter 5 description:Amino acid transporter, transmembrane domain containing protein. (Os11t0169200-00)
Sequence	MASEKVETIVAGNYVEMEREGAATAGEGVGGAAAASGRRRGKLAVSSLFWHGGSVYDAWF SCASNQVAQVLLTLPYSFSQLGMASGVAFQVFYGLMGSWTAYLISVLYVEYRTRRERDKV DFRNHVIQWFEVLDGLLGRHWRNAGLLFNCTFLLFGSVIQLIACASNIYYINDRLDKRTW TYIFGACCATTVFVPSFHNYRVWSFLGLLMTSYTAWYLTVAAVVHGKVDGAAPRAGPSKT MVLYFTGATNILYTFGGHAVTVEIMHAMWRPRRFKMIYLAATAYVLTLTLPSAAAMYWAF GDALLDHSNAFALLPRTPWRDAAVVLMLIHQFITFGFACTPLYFVWEKAIGVHGGAGVLR RAAARLPVVLPIWFLAVIFPFFGPINSTVGSFLVSFTVYIIPAMAHMATFAPAAARENAV EPPPRALGGWPGTFAANCFVVAWVLVVGFGFGGWASTVNFVRQVDTFGLFTKCYQCPPRH

Transcript Sequence

Transcript ID	Os11t0169200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3342973:3344506:-1 gene:Os11g0169200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:like aux1-5, auxin transporter 5 description:Amino acid transporter, transmembrane domain containing protein. (Os11t0169200-00)
Sequence	ATGGCGTCGGAGAAGGTGGAGACGATCGTGGCGGGCAACTACGTCGAGATGGAGCGTGAA GGCGCCGCCACCGCCGGCGAAGGCGTCGGCGGAGCCGCGGCGGCGTCGGGCAGGCGGCGC GGCAAGCTCGCCGTCTCCAGCCTCTTCTGGCACGGCGGCTCCGTCTACGACGCCTGGTTC AGCTGCGCCTCCAACCAGGTGGCGCAGGTGCTGCTGACGCTGCCCTACTCCTTCTCGCAG CTGGGCATGGCGTCCGGGGTGGCGTTCCAGGTGTTCTACGGGCTGATGGGGTCGTGGACG GCCTACCTCATCAGCGTGCTCTACGTCGAGTACCGGACGCGGCGGGAGCGCGACAAGGTG GACTTCCGCAACCATGTCATCCAGTGGTTCGAGGTGCTCGACGGCCTCCTCGGCCGCCAT TGGCGCAACGCCGGCCTCCTCTTCAACTGCACCTTCCTCCTCTTCGGCTCCGTCATCCAG CTCATCGCCTGCGCCAGCAACATCTACTACATCAACGACCGCCTCGACAAGCGGACATGG ACCTACATCTTCGGGGCTTGCTGCGCCACCACGGTGTTCGTCCCGTCCTTCCACAACTAC CGCGTCTGGTCCTTCCTCGGCCTCCTCATGACGTCCTACACCGCGTGGTACCTCACCGTC GCCGCCGTCGTGCACGGCAAGGTGGATGGGGCGGCGCCGCGCGCCGGGCCGAGCAAGACG ATGGTGCTCTACTTCACCGGCGCCACCAACATCCTCTACACGTTCGGCGGCCACGCCGTG ACGGTGGAGATCATGCACGCCATGTGGAGGCCGCGGCGGTTCAAGATGATCTACCTCGCC GCGACGGCGTACGTGCTGACGCTGACGCTGCCGTCGGCGGCGGCGATGTACTGGGCGTTC GGGGACGCGCTGCTGGACCACTCCAACGCCTTCGCGCTGCTGCCGCGGACGCCGTGGCGC GACGCCGCGGTGGTGCTCATGCTCATCCACCAGTTCATCACCTTCGGCTTCGCCTGCACG CCGCTCTACTTCGTGTGGGAGAAGGCCATCGGCGTCCACGGCGGCGCCGGCGTGCTCCGC CGCGCGGCGGCGAGGCTCCCCGTCGTGCTCCCCATCTGGTTCCTCGCCGTCATCTTCCCC TTCTTCGGCCCCATCAACTCCACCGTCGGATCCTTCCTCGTCAGCTTCACCGTCTACATC ATCCCGGCGATGGCGCACATGGCGACGTTCGCGCCGGCGGCCGCCAGGGAGAACGCCGTC GAGCCGCCGCCGCGCGCGCTCGGCGGCTGGCCGGGGACGTTCGCCGCCAACTGCTTCGTC GTCGCGTGGGTGCTCGTCGTCGGCTTCGGCTTCGGCGGATGGGCGAGCACGGTCAACTTC GTTCGCCAAGTTGACACCTTTGGCCTCTTCACCAAGTGCTACCAGTGCCCTCCAAGACAC TAG