Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0169100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3332449:3338962:1 gene:Os11g0169100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1-like protein family protein. (Os11t0169100-01)
Sequence	ATGGGGTCGGTGGATCTGATCGCCGCCTGCCTCGACTCCATCCGCCAGATTGGAGATGAG ATTGCAGATGCACTAGTGTACCTTGATGCAGGCACTCTGGAGGCGTTTCAGTTTATTGGA GCTTTCCCCTTGCTTCTTGAGCTTGGTGCTCGTGCAATTTGCAGCTTGGAGAATGCATCT CCGCTTGATGCTGCTGCTGAATGGCACTCAAGTTTTGCACATCCAGCAAGGAAGATAGTA GTGATTACATCACGCCTGCTTAGTGATGCACATCGGTATATTTTGCGCTGCCTGGGAAAC CATGGAACTATTTCACATTGTACTGTGTTGACAGCTATTTCCGAGGTTGGTCACTCAGCA TATGTTGATTCCCCATTTGGACCAGATGCCTTCCGGGAGTATGAGACATTACTTACTCAG GACCATGAGGAACTTCTGAAGAAGTATGAAAAGTCAGATGAGCACAAAGATACCACTTTT TACACAGGAAAAGATTTCACATCGGATGGTGGTAGATACTCCAATTGGGAATCTGGGGTG CATTATGGCTCTAATTCTGAATCTAGCCCAACAAAAAAGGATTTGTTTGCTGATGAGTCA AGCCAGCTAGAAACTAAAGGAAAAAGATTATCTGTAACTGTGACTCACTTTCCGATGATT TTCTCTCCTATTTCCTCTAGGACTTTTGTTTTGCCATCTGAAGGCACAATGGCTGAATCA TGTTTATCAAACCATCATGAAGATTCCCTTAGTCCAGGGCTACCTCCCATATCTACTGGT AGATCTTTTGATGGTGATGAGATTCCCCCCGGAGTGACATTGACTGCCCAGTTCCTTTAC CATCTGGCCAGTAAGATGGACCTAAAGCTCGATATATTTTCACTTGGAGATACATCAAAG GTCATCGGGAAGCTGATGATGGATATGTCAAGTCTATATGATGTTGGTCGTAATAAGAGA TCTGCTGGCCTGCTGATCGTAGATCGTACACTTGATCTCCTTACTCCTTGTTTCCACGGT GACTCATTTCTTGATAGGATGCTGTCCTCCTTGACACGCAAGGAAGGGACTTCATCCTAT TTTGTGTCCAAAAATCCACAAACTCCAAGCAAGCATTCTGAAGCTACTGTTAAACGTATC CCACTAGATATAAAGGTCCCTTTTGAAAAGGTCTTCAGCAAGGAAGAACCTAAGAGTAGG ACCAGTATGTTACCCGAAAGTATCATGTCATTTGTGTCTGGATGGAACTCTGCTGAAGTT GAATCTGAAGTAACCTGGCTACCTGATTACGCGGATAAAGCTCATGATGACAAACTCAGC AGTCAACATGGTAGTTTAAATGGTTCATTCCTATCCAATTATGCTGGAGTGTGCTACTTG GAATCATTACTCGACAGAGGAGCAAAAGATGGGTTAATGTTGATTAAGAAATGGCTTATG GAAGCTTTACAACATGAGAAGTTATCCTTCCCATCCAAAGGTCGGCAAGGAGCTGCCTCT GTTTCAGAGCTTCATTCTATGGTTCAAATGCTCTCTCGAGACCAGTTATCCTTAGTAAGA AACAGAGGGGTTATCCAATTGGCACTGGCTGCTGAAATGGCTCTCCAGGAGCCTCAAAGT TCTCGCTGGGATGCCTTTACAAGTGCAGAGAGAATATTAAGTGTAACATCTGCAGAGACA ACTCAAAGTCTTGCCAGTGAGCTTCGTGATTTTATCAACACTAGCACTTCAGTTGAATCT CACAAGCAAGCTAATAAAACTGAGTCCTCTCAGGGCCTTCTAAGTTTCCAGGATGTTTTG CTTCTAACAATTATCGGGTATATCTTGGCTGGTGAAAATTTTCCTACATCGATTGCTGGT GGTCCATTCTCTTGGGAAGACGAGCGGTCTTTGAAAGATATTGTGGTGGACTCTATCCTT GACAGGCCATCATCTGTGAAGCTCAGATTTCTTGTTGGCTTGGAGAATGAGCTTGAAGCT AAAGCTAGACCTAAAGATGGTGACAAAAGTAATGACTCCATCGAAGCTTCTAAGAGTACT GATGATTTTGATGACCAATGGGATAGCTGGGGTGATGATGATGATAATACTGATGATCAG AAGGATGAAGCTTATGGGGACATGCAACTTAAGTTGGAAGTACGAGACAGAGTTGACCAG CTTTTTAAGTTCTTTCACAATTTGTCCAGTATGAGGTTAAGGAACCAAACTCTTGGAGAA GGCCTAGCAGCACTGAGCAGATTTGAGACTGACATATACTCAAGAAAAGGCTTGCTCTAT AAGTTGCTATTAGCTGTCTTGGCAAGGTATGACATTCCTGGCCTTGAATATCACTCATCA GCTGTTGGACGTTTATTTAAAAGTGGACTGGGGAGGTTTGGGCTAGGACAGTCTAAACCA AGCTTTGGCGACCAAAGCATTCTCATCGTTTTTGTTGTGGGAGGCATCAATGCCCTTGAG GTCCGGGAAGTCATGAAGGCAATATCAGACAGCAGCAGACCTGATGTGGAGCTTATTCTT GGGGGAACAACCCTTCTTACCCCAGATGACATGTTTGAGTTGATGTTGGGCTCATCCAGC TTTAGTTAG

Peptide Sequence

PEP ID	Os11t0169100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3332449:3338962:1 gene:Os11g0169100 transcript:Os11t0169100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1-like protein family protein. (Os11t0169100-01)
Sequence	MGSVDLIAACLDSIRQIGDEIADALVYLDAGTLEAFQFIGAFPLLLELGARAICSLENAS PLDAAAEWHSSFAHPARKIVVITSRLLSDAHRYILRCLGNHGTISHCTVLTAISEVGHSA YVDSPFGPDAFREYETLLTQDHEELLKKYEKSDEHKDTTFYTGKDFTSDGGRYSNWESGV HYGSNSESSPTKKDLFADESSQLETKGKRLSVTVTHFPMIFSPISSRTFVLPSEGTMAES CLSNHHEDSLSPGLPPISTGRSFDGDEIPPGVTLTAQFLYHLASKMDLKLDIFSLGDTSK VIGKLMMDMSSLYDVGRNKRSAGLLIVDRTLDLLTPCFHGDSFLDRMLSSLTRKEGTSSY FVSKNPQTPSKHSEATVKRIPLDIKVPFEKVFSKEEPKSRTSMLPESIMSFVSGWNSAEV ESEVTWLPDYADKAHDDKLSSQHGSLNGSFLSNYAGVCYLESLLDRGAKDGLMLIKKWLM EALQHEKLSFPSKGRQGAASVSELHSMVQMLSRDQLSLVRNRGVIQLALAAEMALQEPQS SRWDAFTSAERILSVTSAETTQSLASELRDFINTSTSVESHKQANKTESSQGLLSFQDVL LLTIIGYILAGENFPTSIAGGPFSWEDERSLKDIVVDSILDRPSSVKLRFLVGLENELEA KARPKDGDKSNDSIEASKSTDDFDDQWDSWGDDDDNTDDQKDEAYGDMQLKLEVRDRVDQ LFKFFHNLSSMRLRNQTLGEGLAALSRFETDIYSRKGLLYKLLLAVLARYDIPGLEYHSS AVGRLFKSGLGRFGLGQSKPSFGDQSILIVFVVGGINALEVREVMKAISDSSRPDVELIL GGTTLLTPDDMFELMLGSSSFS

Transcript Sequence

Transcript ID	Os11t0169100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3332449:3338962:1 gene:Os11g0169100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec1-like protein family protein. (Os11t0169100-01)
Sequence	CCGTCGTCTCGTCTCGTCTCCTCCGCCGCCGCGATTCATCCGACACCACCGGCGGCATCT CCGGCGAGCGGCAGCGCCGAACACCCCCAACCCCACCGAGTTCTTTACGGCTGGTGTCTC CCCTCCCATCCTCGCTACCGCGTCGCCGGCGCACGGGGAGGGTGGGGGCGTGGCGGCGAA GAGATTCCTGGGATCTCAGGGGATAGTGGACTATGGGGTCGGTGGATCTGATCGCCGCCT GCCTCGACTCCATCCGCCAGATTGGAGATGAGATTGCAGATGCACTAGTGTACCTTGATG CAGGCACTCTGGAGGCGTTTCAGTTTATTGGAGCTTTCCCCTTGCTTCTTGAGCTTGGTG CTCGTGCAATTTGCAGCTTGGAGAATGCATCTCCGCTTGATGCTGCTGCTGAATGGCACT CAAGTTTTGCACATCCAGCAAGGAAGATAGTAGTGATTACATCACGCCTGCTTAGTGATG CACATCGGTATATTTTGCGCTGCCTGGGAAACCATGGAACTATTTCACATTGTACTGTGT TGACAGCTATTTCCGAGGTTGGTCACTCAGCATATGTTGATTCCCCATTTGGACCAGATG CCTTCCGGGAGTATGAGACATTACTTACTCAGGACCATGAGGAACTTCTGAAGAAGTATG AAAAGTCAGATGAGCACAAAGATACCACTTTTTACACAGGAAAAGATTTCACATCGGATG GTGGTAGATACTCCAATTGGGAATCTGGGGTGCATTATGGCTCTAATTCTGAATCTAGCC CAACAAAAAAGGATTTGTTTGCTGATGAGTCAAGCCAGCTAGAAACTAAAGGAAAAAGAT TATCTGTAACTGTGACTCACTTTCCGATGATTTTCTCTCCTATTTCCTCTAGGACTTTTG TTTTGCCATCTGAAGGCACAATGGCTGAATCATGTTTATCAAACCATCATGAAGATTCCC TTAGTCCAGGGCTACCTCCCATATCTACTGGTAGATCTTTTGATGGTGATGAGATTCCCC CCGGAGTGACATTGACTGCCCAGTTCCTTTACCATCTGGCCAGTAAGATGGACCTAAAGC TCGATATATTTTCACTTGGAGATACATCAAAGGTCATCGGGAAGCTGATGATGGATATGT CAAGTCTATATGATGTTGGTCGTAATAAGAGATCTGCTGGCCTGCTGATCGTAGATCGTA CACTTGATCTCCTTACTCCTTGTTTCCACGGTGACTCATTTCTTGATAGGATGCTGTCCT CCTTGACACGCAAGGAAGGGACTTCATCCTATTTTGTGTCCAAAAATCCACAAACTCCAA GCAAGCATTCTGAAGCTACTGTTAAACGTATCCCACTAGATATAAAGGTCCCTTTTGAAA AGGTCTTCAGCAAGGAAGAACCTAAGAGTAGGACCAGTATGTTACCCGAAAGTATCATGT CATTTGTGTCTGGATGGAACTCTGCTGAAGTTGAATCTGAAGTAACCTGGCTACCTGATT ACGCGGATAAAGCTCATGATGACAAACTCAGCAGTCAACATGGTAGTTTAAATGGTTCAT TCCTATCCAATTATGCTGGAGTGTGCTACTTGGAATCATTACTCGACAGAGGAGCAAAAG ATGGGTTAATGTTGATTAAGAAATGGCTTATGGAAGCTTTACAACATGAGAAGTTATCCT TCCCATCCAAAGGTCGGCAAGGAGCTGCCTCTGTTTCAGAGCTTCATTCTATGGTTCAAA TGCTCTCTCGAGACCAGTTATCCTTAGTAAGAAACAGAGGGGTTATCCAATTGGCACTGG CTGCTGAAATGGCTCTCCAGGAGCCTCAAAGTTCTCGCTGGGATGCCTTTACAAGTGCAG AGAGAATATTAAGTGTAACATCTGCAGAGACAACTCAAAGTCTTGCCAGTGAGCTTCGTG ATTTTATCAACACTAGCACTTCAGTTGAATCTCACAAGCAAGCTAATAAAACTGAGTCCT CTCAGGGCCTTCTAAGTTTCCAGGATGTTTTGCTTCTAACAATTATCGGGTATATCTTGG CTGGTGAAAATTTTCCTACATCGATTGCTGGTGGTCCATTCTCTTGGGAAGACGAGCGGT CTTTGAAAGATATTGTGGTGGACTCTATCCTTGACAGGCCATCATCTGTGAAGCTCAGAT TTCTTGTTGGCTTGGAGAATGAGCTTGAAGCTAAAGCTAGACCTAAAGATGGTGACAAAA GTAATGACTCCATCGAAGCTTCTAAGAGTACTGATGATTTTGATGACCAATGGGATAGCT GGGGTGATGATGATGATAATACTGATGATCAGAAGGATGAAGCTTATGGGGACATGCAAC TTAAGTTGGAAGTACGAGACAGAGTTGACCAGCTTTTTAAGTTCTTTCACAATTTGTCCA GTATGAGGTTAAGGAACCAAACTCTTGGAGAAGGCCTAGCAGCACTGAGCAGATTTGAGA CTGACATATACTCAAGAAAAGGCTTGCTCTATAAGTTGCTATTAGCTGTCTTGGCAAGGT ATGACATTCCTGGCCTTGAATATCACTCATCAGCTGTTGGACGTTTATTTAAAAGTGGAC TGGGGAGGTTTGGGCTAGGACAGTCTAAACCAAGCTTTGGCGACCAAAGCATTCTCATCG TTTTTGTTGTGGGAGGCATCAATGCCCTTGAGGTCCGGGAAGTCATGAAGGCAATATCAG ACAGCAGCAGACCTGATGTGGAGCTTATTCTTGGGGGAACAACCCTTCTTACCCCAGATG ACATGTTTGAGTTGATGTTGGGCTCATCCAGCTTTAGTTAGTCTCAAGCTTAATTGTTGA GAAGCTCAGTCCAGTTAACACCAATGCATCTGCCTTGGACATCTTAAGAATGATCCAGAT CATTTCTCCGGAAGTTCTTTCTCCAAACGTGGCAGTTCAGATACTGAAACTCTAAAGATT GTATCTTGGTGATGATACCAACAGCAAGCATAGGCAATTCAATTCATAAGCTCTTCAGAT TTTTAATCGCAACTGAATGCAGCGATACAGTTCGTCTTTTGTAGGACAGCCATTGAAAAC AATGACTTTTGAGAATCATCTTCTGGACATTCATTCATGCTTTGCTCAAAAGCTGGAGTC TACTGCTTTGGATCAGTCACTGTATTTGCAAGTGAAGTCAAATATGAAGTGACCCTGCTG ACTACACAGTAAACACTCAAAACAAGGTGTAATTCTGTCTTAAGTTCTCTTGCTCCTAGA AGTAGCTGCTCTTCCGTTCAGAAGCCATATGTAAATTTAATCTATGTAAATTGTTTGCTG TTGATTCGAAAATCTTTGGTGTTCACTGGTCAGGAGAACTGTCAAATTAGGTACAGCATT GTAACTGAAAGAACATCATTACTCAGTTCAGTGAACTGAAGTGTACATGCACTATGTTGT GACTTGTGAGTAATATCACAACCCCCAAAAAAAGGCAAATAAAATTAGGAATAGTTTGTT ATGTTCCAGAAAAAAAATAAACATATCATAATGTGTG