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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0168300-03
CDS Infomation

cds chromosome:IRGSP-1.0:11:3299355:3303040:1 gene:Os11g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alba, DNA/RNA-binding protein family protein. (Os11t0168300-01);Alba, DNA/RNA-binding protein family protein. (Os11t0168300-02);Similar to ribonuclease P. (Os11t0168300-03)
Sequence

TATATCAGCTATGGGATGTCGTTGCTTGAGGAAAATGGGCATGATGAGATTGTCATCAAA
GCTATGGGAAGAGCCATCAATAAGACAGTCATGGTTGTTGAATTGATCAAGAGAAGGATC
GGTGGTCTTCATCAGATTACATCTACTGAATCAATTGACATCACGGACACTTGGGAACCT
TTGGAAGAAGGCCTTCTCCCCCTAGAGACCACCCGGCATGTATCAATGATCGCCATAACA
TTATCCAAGAAAGCACTGGATACGTTATCTCCAGGGTACCAGCCACCTATCCCAGCTGAA
GAAGTGAGACCCGCTTTTGACTATGAACACGAAGAATCTTTCCCCACTAATCGTGGAAGA
GGCCGTGGTGGTGGCAGAAGAGGCAGGGGCAGAGCCATGAGCAATGGTCCCCCCGCTTAT
GATTATGGCGAGGAGTGGGAAGAGGAAGGAGATTATTACAACTACAGAGGCAGAGGGAGA
GGCCGATTTAGAGGACGAGGACGTGGAAGAGGCCGTGGTGGCTACTACGGAGGTGGTCGA
CGTGGTGGATATGGCTATGATTACGGTTATGGCGGCAGGGGGGACTATTATGAAGATCAG
GGCGAATACTTTGAAGAACCAGAGGACTACCCCCCTCCAGGCCGTGGACGTGGCAGGGGA
AGAAGGGGCGGAGGACCGGGACCATTCCGTGGTCGCGGCCGTGGGCGTGGTCGATTCTAA

Peptide Sequence

PEP ID

Os11t0168300-03
PEP Infomation

pep chromosome:IRGSP-1.0:11:3299355:3303040:1 gene:Os11g0168300 transcript:Os11t0168300-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alba, DNA/RNA-binding protein family protein. (Os11t0168300-01);Alba, DNA/RNA-binding protein family protein. (Os11t0168300-02);Similar to ribonuclease P. (Os11t0168300-03)
Sequence

YISYGMSLLEENGHDEIVIKAMGRAINKTVMVVELIKRRIGGLHQITSTESIDITDTWEP
LEEGLLPLETTRHVSMIAITLSKKALDTLSPGYQPPIPAEEVRPAFDYEHEESFPTNRGR
GRGGGRRGRGRAMSNGPPAYDYGEEWEEEGDYYNYRGRGRGRFRGRGRGRGRGGYYGGGR
RGGYGYDYGYGGRGDYYEDQGEYFEEPEDYPPPGRGRGRGRRGGGPGPFRGRGRGRGRF

Transcript Sequence

Transcript ID

Os11t0168300-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:3299355:3303040:1 gene:Os11g0168300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alba, DNA/RNA-binding protein family protein. (Os11t0168300-01);Alba, DNA/RNA-binding protein family protein. (Os11t0168300-02);Similar to ribonuclease P. (Os11t0168300-03)
Sequence

CTATATCAGCTATGGGATGTCGTTGCTTGAGGAAAATGGGCATGATGAGATTGTCATCAA
AGCTATGGGAAGAGCCATCAATAAGACAGTCATGGTTGTTGAATTGATCAAGAGAAGGAT
CGGTGGTCTTCATCAGATTACATCTACTGAATCAATTGACATCACGGACACTTGGGAACC
TTTGGAAGAAGGCCTTCTCCCCCTAGAGACCACCCGGCATGTATCAATGATCGCCATAAC
ATTATCCAAGAAAGCACTGGATACGTTATCTCCAGGGTACCAGCCACCTATCCCAGCTGA
AGAAGTGAGACCCGCTTTTGACTATGAACACGAAGAATCTTTCCCCACTAATCGTGGAAG
AGGCCGTGGTGGTGGCAGAAGAGGCAGGGGCAGAGCCATGAGCAATGGTCCCCCCGCTTA
TGATTATGGCGAGGAGTGGGAAGAGGAAGGAGATTATTACAACTACAGAGGCAGAGGGAG
AGGCCGATTTAGAGGACGAGGACGTGGAAGAGGCCGTGGTGGCTACTACGGAGGTGGTCG
ACGTGGTGGATATGGCTATGATTACGGTTATGGCGGCAGGGGGGACTATTATGAAGATCA
GGGCGAATACTTTGAAGAACCAGAGGACTACCCCCCTCCAGGCCGTGGACGTGGCAGGGG
AAGAAGGGGCGGAGGACCGGGACCATTCCGTGGTCGCGGCCGTGGGCGTGGTCGATTCTA
AGATGAAATCAGGAGGAGGTGCCCTTGAAGCTTGAGAACTCGTGTGCTTAAATTATCTGA
TAATGCTGTTCTGTATGGGGGTTTCGACATGAATCCGTATGCCCCATCAGTATGTTTTTA
CTTCCCGTGGCGGTGTGACTGATTGGGCAAATTTTGTGGCTGGATCTTGGTTTTGTAGCT
AGGCCTGTCCTGTCAGCAAAAGCAACAACAAACAAACAAACACCCTGTGCTGCTGTTTAT
TTATCAACAACCTAGGTTTCCTTCC