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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0168000-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:3288494:3289070:-1 gene:Os11g0168000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1278 family protein. (Os11t0168000-01)
Sequence

ATGGCGCTCGCCGTGAAGCTCGCCGTCCTCCTACTACTTGCCGCGGCAGCAGCTGGAGGA
AGCAGCACGACGACCGTGCCGCCGCTGGAGGAGAGGCTGGGCGCGGCGTTCGACGGGATG
GCGGCGGCGGCGGAGGGAGGAGGAGGGGGAGGGTGGATGATGGAGTGCTGGAGCGCGGTG
ACGAAGCTGGGGTCGTGCACGAACGAGATCGTGCTCTTCTTCGTCAACGGCGAGTCCTAC
CTCGGCCCGGACTGCTGCGTCGCCATCCGCACCGTCACCCGCCGCTGCTGGCCGGCCATG
CTCGCCTCCATCGGCTTCACCGCCCAGGAGGCCGACATCCTCCGCGGCTTCTGCGACGCC
GAGCTCGCCGCCCCGCCCCCGCCCTCCACCAACGCCTCCTCCGCCGCCCCCGCGCCGGCG
CCGGCGTCCGCTTAG

Peptide Sequence

PEP ID

Os11t0168000-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:3288494:3289070:-1 gene:Os11g0168000 transcript:Os11t0168000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1278 family protein. (Os11t0168000-01)
Sequence

MALAVKLAVLLLLAAAAAGGSSTTTVPPLEERLGAAFDGMAAAAEGGGGGGWMMECWSAV
TKLGSCTNEIVLFFVNGESYLGPDCCVAIRTVTRRCWPAMLASIGFTAQEADILRGFCDA
ELAAPPPPSTNASSAAPAPAPASA

Transcript Sequence

Transcript ID

Os11t0168000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:3288494:3289070:-1 gene:Os11g0168000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1278 family protein. (Os11t0168000-01)
Sequence

ACTGCACCATCAGCTCCCACAAACCCAGCTAACCAAGTTTAATTGCCACCAAGCTCACCA
ATGGCGCTCGCCGTGAAGCTCGCCGTCCTCCTACTACTTGCCGCGGCAGCAGCTGGAGGA
AGCAGCACGACGACCGTGCCGCCGCTGGAGGAGAGGCTGGGCGCGGCGTTCGACGGGATG
GCGGCGGCGGCGGAGGGAGGAGGAGGGGGAGGGTGGATGATGGAGTGCTGGAGCGCGGTG
ACGAAGCTGGGGTCGTGCACGAACGAGATCGTGCTCTTCTTCGTCAACGGCGAGTCCTAC
CTCGGCCCGGACTGCTGCGTCGCCATCCGCACCGTCACCCGCCGCTGCTGGCCGGCCATG
CTCGCCTCCATCGGCTTCACCGCCCAGGAGGCCGACATCCTCCGCGGCTTCTGCGACGCC
GAGCTCGCCGCCCCGCCCCCGCCCTCCACCAACGCCTCCTCCGCCGCCCCCGCGCCGGCG
CCGGCGTCCGCTTAGCGCCGGCCGGTGGCGCGTTGAACACGCTCTTAATGTAATAAAATA
AACTTGGAAATAAATTAATTATAGCCAGTTTGCAGCC