Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0163800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:3110576:3112429:1 gene:Os11g0163800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF793 family protein. (Os11t0163800-01)
Sequence

ATGCCGGCGACCGACTACCAGGGCTCCTCCTCGACCCACTCCCACCCGTCGCCCTTCTCC
TCGTTCGGCCGCTCCCTCCTCTCGCTCCGCCGCGACAGCCCCGCCGCCGCCGCCGGCGCG
TCCCCGGCCATGGCGTCCGGCGAGGAGGCCGACCTGGAGGCGTTCCAGCGGCACGTGGCG
GCGCACCTCGCCGATCTCAGGGGCGGGGAGGACGAGCTCCTGTCCATCGAGTGGATCCGG
CGGCTGCTCGAGGCGTTCCTGCTGTGCCAGGAGGAGTTCCGGGTGGTGGTGGCGCTGGCG
CGCCGCCGCGGGGCGCTGTCGGCGGCGGCGGAGAAGATGGTGGGGGATTTCTACGAGCGC
GCGGTGAAGGCGCTCGACGTGTGCAACGCCGCACGCGACGGCGTCGACCAGGTCAGGCGG
TGGGAGCGGCTCGCCGGCATCGCGGCGTCCGTGCTGCTCGCCCCAGGGGAGATCCACGAG
GGCCAGCTCCGCCGCGCGCGGAAGGCGCTCTCCGACCTCTCGGTGCTCCTCATCGACGAC
GCCGCGGCCGCCGCGGGTGGCGGCGGCGTCGCCTCCTTCCTCTCCTCCCACCGCAACCGC
TCCTTCGGCCGCGCCCGCGCGTCGCCCTCCCGCTCCGCGACGCTCGCCTCCTCCTCATCC
TCCTCGTCGTCGTCCTCCTCCTCCTCCCACTTCCGCTCGCTCTCGTGGAGCGTCTCCCGC
AACTGGTCGGCGGCTAGGCAGCTGCAGGCCATCGGGTCCGGCCTGGCGGCGCCGCGCGCG
CACGAGGGGGGACTCGTGGCGCCGGTGTACTCCATGGGCTGCCTGCTCCACCTCGCCGCG
TGGGCCCTCGTCGCCGCCGTGCCGTGCCCGGACCGCGCCGCCGCGCTCCAGGCGCACCAC
CTCCCCGCCGCGCCGCCGCGCGCCGCGTTCCCATGGGCGCCGCCGCTGCTCGCGCTCCAG
GAGCGCCTCACCGAGGAGGGGAAGCGCAAGGACAGGCGCAACTCCTGCGGCCTCCTCAAG
GAAATCCACGCGCTGGAGAAATGCACGCAGCGGCTCGCCGAGGCGATCGACGCCGCACCC
GTCCCGCTCTCCGGTGAGCGCGAGGCCGAGGTACGGGAGGCCGCCGCCGAGCTGGCTGCC
GTGTGCGCCGCCATGAGGGCCGGCCTTGAGCCTCTCGAAAGGCAGGTCAGGGAGGTGTTC
CACCGCATTGTTCGCAGCCGCATGGAGGGGCTCGATTCGCCGATGCTCAACGCCGATTGA

Peptide Sequence

PEP ID

Os11t0163800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:3110576:3112429:1 gene:Os11g0163800 transcript:Os11t0163800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF793 family protein. (Os11t0163800-01)
Sequence

MPATDYQGSSSTHSHPSPFSSFGRSLLSLRRDSPAAAAGASPAMASGEEADLEAFQRHVA
AHLADLRGGEDELLSIEWIRRLLEAFLLCQEEFRVVVALARRRGALSAAAEKMVGDFYER
AVKALDVCNAARDGVDQVRRWERLAGIAASVLLAPGEIHEGQLRRARKALSDLSVLLIDD
AAAAAGGGGVASFLSSHRNRSFGRARASPSRSATLASSSSSSSSSSSSSHFRSLSWSVSR
NWSAARQLQAIGSGLAAPRAHEGGLVAPVYSMGCLLHLAAWALVAAVPCPDRAAALQAHH
LPAAPPRAAFPWAPPLLALQERLTEEGKRKDRRNSCGLLKEIHALEKCTQRLAEAIDAAP
VPLSGEREAEVREAAAELAAVCAAMRAGLEPLERQVREVFHRIVRSRMEGLDSPMLNAD

Transcript Sequence

Transcript ID

Os11t0163800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:3110576:3112429:1 gene:Os11g0163800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF793 family protein. (Os11t0163800-01)
Sequence

ACATCACCACCTCACCATCTCCATCCATCTCACCCGTTAACCCGCTAAGCTCTCTCTCCA
AGATCCGCTTCGGTTTCCTCTCCGGCGATCTCGCCGGCGACCATGCCGGCGACCGACTAC
CAGGGCTCCTCCTCGACCCACTCCCACCCGTCGCCCTTCTCCTCGTTCGGCCGCTCCCTC
CTCTCGCTCCGCCGCGACAGCCCCGCCGCCGCCGCCGGCGCGTCCCCGGCCATGGCGTCC
GGCGAGGAGGCCGACCTGGAGGCGTTCCAGCGGCACGTGGCGGCGCACCTCGCCGATCTC
AGGGGCGGGGAGGACGAGCTCCTGTCCATCGAGTGGATCCGGCGGCTGCTCGAGGCGTTC
CTGCTGTGCCAGGAGGAGTTCCGGGTGGTGGTGGCGCTGGCGCGCCGCCGCGGGGCGCTG
TCGGCGGCGGCGGAGAAGATGGTGGGGGATTTCTACGAGCGCGCGGTGAAGGCGCTCGAC
GTGTGCAACGCCGCACGCGACGGCGTCGACCAGGTCAGGCGGTGGGAGCGGCTCGCCGGC
ATCGCGGCGTCCGTGCTGCTCGCCCCAGGGGAGATCCACGAGGGCCAGCTCCGCCGCGCG
CGGAAGGCGCTCTCCGACCTCTCGGTGCTCCTCATCGACGACGCCGCGGCCGCCGCGGGT
GGCGGCGGCGTCGCCTCCTTCCTCTCCTCCCACCGCAACCGCTCCTTCGGCCGCGCCCGC
GCGTCGCCCTCCCGCTCCGCGACGCTCGCCTCCTCCTCATCCTCCTCGTCGTCGTCCTCC
TCCTCCTCCCACTTCCGCTCGCTCTCGTGGAGCGTCTCCCGCAACTGGTCGGCGGCTAGG
CAGCTGCAGGCCATCGGGTCCGGCCTGGCGGCGCCGCGCGCGCACGAGGGGGGACTCGTG
GCGCCGGTGTACTCCATGGGCTGCCTGCTCCACCTCGCCGCGTGGGCCCTCGTCGCCGCC
GTGCCGTGCCCGGACCGCGCCGCCGCGCTCCAGGCGCACCACCTCCCCGCCGCGCCGCCG
CGCGCCGCGTTCCCATGGGCGCCGCCGCTGCTCGCGCTCCAGGAGCGCCTCACCGAGGAG
GGGAAGCGCAAGGACAGGCGCAACTCCTGCGGCCTCCTCAAGGAAATCCACGCGCTGGAG
AAATGCACGCAGCGGCTCGCCGAGGCGATCGACGCCGCACCCGTCCCGCTCTCCGGTGAG
CGCGAGGCCGAGGTACGGGAGGCCGCCGCCGAGCTGGCTGCCGTGTGCGCCGCCATGAGG
GCCGGCCTTGAGCCTCTCGAAAGGCAGGTCAGGGAGGTGTTCCACCGCATTGTTCGCAGC
CGCATGGAGGGGCTCGATTCGCCGATGCTCAACGCCGATTGAAACATGGAGAATTCACAT
TTGATCGCGCAATGTGGTGGTGATAGGTAATGCCGATCGAACCGTCGAGAATTTGGATTT
GATCGCGCAAATGTGGTGGTTATAGGTAGCTCTCCTGTTCTTGGTTTTTTTCCTCACTTG
TGGTGGTCTAGTAGTAATTATAAAATGTGTGCCGTTCTGTAAAGGAAGGGGGGAAAGGAA
AGGAACCATCTTTATGTAAAGATGATTCCTTCTTCCCATGTTTTGATGCTGCATTTGGTG
TATATCATGGCATTTTTGTTAGTCCTCCATGTGTGCGCGGCTAATTCTGGGAGTAACTTA
TAGTTGAAAAATCTGTGAGGTCGCTATGAAATGTGGCCTGTTGTCGAGAATGTCGACAAA
AAAATTAAACAAGAAAAAAAAATCTACTGTGGTTTAGTTCGATTGTGTTGTGTCATAATT
CATGTTTGGTCCTGATATTTGGATGGTTTAATCAAAAGGTCAAATCTTGAAACT