Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0162000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:3027714:3031891:-1 gene:Os11g0162000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Autophagy-related protein 13 domain containing protein. (Os11t0162000-01)
Sequence	TGGAGGAGAGGAGGAGATTGGGAGGGGGACGAGCGGTGCGAACTAGATAAGTGGTTCGGA ATCGGATCCTCCTCCTCGCTGAGTGTGGGCGCAAGTCTACGAGTTCCCCGATCTCACCAC GCGACGGCAACCGCGAGATTGGCTCCGGATAAGGTGTTTGATACCATGGCTGCTGCCGCG GAGCCACCCATGGTGGAGCAAGTGATCACCGAGTTTTTCGCCAAGAGCCTCCACATCATA CTGGAGTCGCGCTCTCCGTACGAGTCGTCGCGCAACTTCACGCGGCCCTCGCCACCGTCC TCGCCGCTGTCCGGGAGCCAGCCACGCGACCGGTGGTTCAACCTTGCGCTCCGGGACTGC CCGGCTGTGCTCGAGAACTTTGACCTGTGGCGGCAGAGCAACCTTGAGCCGTTGGTCATT GACATTGTCCTCTTATGCCGGGACAGCACCAGCAACACAGCTGCTGGGAGTGGGAAGATA ATAGAGAGGTGGGTGATACAGTATGAAGCTCGCAAGTCTGGCGGTGGCAATGGTAATGGC AGCAAGAACAATGGCAGGAAGTCTAGGAACAGCTCGGCTGAGGATCATAGCTTGTACAGG GCTACCTACCAGGGATCGACAGTGTTACTCCGGTCATTGCATCTGCTCGTCAGGCTCTTG CCAGCATACAGTCTCTTCAGGGAACTGAACTCATCTGGGAGAATCCGTCCTCTCAACCTG TCACACAAGATATCTTCATTTGTTGAGCCATTCACCCGGGCAGAGGATGCAGAGATGAAA CACTATGCATTTGCTCCAATTGAAACTCTGTTTGGCCGATTGAGCTTGTCAGTTTCTTAT GTGCCAGTGTTGGAGGTGGTGGCAGCTTCAGAACCTACATCACCAATGCCACCAGAGATC ATAACGGATTACGTTGGGAGCCCCACAACTGACTTTCTAAAGAAATTCAATTCCCTCCCT TCAGCTGGCATTGCACCTGCATGTGCTGCAATGACCAGGAGGCACAGTTGGAGTATTGAG CATGGAGCTGGAACGTCAGTGTCGCCATCTCCTTCTCCCACTAAGGCACAATCCCGTGGA AGCCCACAGCTAGGCGTTCCTCTGCATGTTTCTCTAAAAACATGCTCACATCCACAAAAT GCATCATCCTCTGGGCAGAAGAAATATACACCATTTGAAGAATGCTATCCATCACCACCA TTGTCACCATCACCATCCCAATCCCCTTCAGCTAACTACCCTAAAAACCCTTTGTTCCGA TATGAGAGTGCACCAGTTACTATTCCCACATTGAAGTCAGGCGGAGGAGGAGGTAGCGGG TTGCCTCCTTCTCCATGTTCGAAGGGTAAGCACCAGTTCTCATCTCACAATGACAACCTG GCACATTCCCCTGATCATAACTCAAATGTAAGGAAGGATCTAGTCAGGTTGGGTGAATTT GAAAAGGACATGGCCTTGCAAAAGGTATTATCTTACAGTAAATATGATTTGGGATACTTT CATGGACTGAAATTGACTCGGACATCAAGTAAACTTTTTATTATGGATGAACTGGATGAA CATGAATTGGTTTTTGCATGGGAAGATAGAGACACCATAATTGATCAGCTTAACAGGGCT GATATCTCAGACAGGGAGGAACAGAAGAACCAAGATGCTGGTGGCTCGTCCACAAGGTCT CCAGCTGCAGCCATTGGTGCTCTTGTGCATCTGCTGAAGACTGCACCAAGCCTCAGAGAA GGCCTACAGTCAGATGCAGCTGCTGTGGTTCCTCAAGAACCTTCGTCAGTTCAGAAGGTC GTGACTGAGGAACATGGCAGCATCGCATCAAGTTCTACACCGGTGACGGCAACTGACGCC CTTGAGGAGCTGAAGAAATACAGGGAGGTTAAAGAATCAATACTAAATCGCGGCAAAACA CAGGTCAGCGGCACCAATCTAGGAGAGAAACTCACAGATGGAGAACCTTAG

Peptide Sequence

PEP ID	Os11t0162000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:3027714:3031891:-1 gene:Os11g0162000 transcript:Os11t0162000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Autophagy-related protein 13 domain containing protein. (Os11t0162000-01)
Sequence	WRRGGDWEGDERCELDKWFGIGSSSSLSVGASLRVPRSHHATATARLAPDKVFDTMAAAA EPPMVEQVITEFFAKSLHIILESRSPYESSRNFTRPSPPSSPLSGSQPRDRWFNLALRDC PAVLENFDLWRQSNLEPLVIDIVLLCRDSTSNTAAGSGKIIERWVIQYEARKSGGGNGNG SKNNGRKSRNSSAEDHSLYRATYQGSTVLLRSLHLLVRLLPAYSLFRELNSSGRIRPLNL SHKISSFVEPFTRAEDAEMKHYAFAPIETLFGRLSLSVSYVPVLEVVAASEPTSPMPPEI ITDYVGSPTTDFLKKFNSLPSAGIAPACAAMTRRHSWSIEHGAGTSVSPSPSPTKAQSRG SPQLGVPLHVSLKTCSHPQNASSSGQKKYTPFEECYPSPPLSPSPSQSPSANYPKNPLFR YESAPVTIPTLKSGGGGGSGLPPSPCSKGKHQFSSHNDNLAHSPDHNSNVRKDLVRLGEF EKDMALQKVLSYSKYDLGYFHGLKLTRTSSKLFIMDELDEHELVFAWEDRDTIIDQLNRA DISDREEQKNQDAGGSSTRSPAAAIGALVHLLKTAPSLREGLQSDAAAVVPQEPSSVQKV VTEEHGSIASSSTPVTATDALEELKKYREVKESILNRGKTQVSGTNLGEKLTDGEP

Transcript Sequence

Transcript ID	Os11t0162000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:3027714:3031891:-1 gene:Os11g0162000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Autophagy-related protein 13 domain containing protein. (Os11t0162000-01)
Sequence	AAGGGCGCACAAGCCCCTCTCCTTCCTTCCTCCTCCCCCCCTCTCGCCGGAGCTCCTCCG CCGTCTCCGCCGCCCCGCCCTCCTCCTCGCCGGCGGCGCTGCTCCCGCGCCCGTTCCAGC TCGCCCGCTCTAGCTTCGCGACCTAGGGCTTGCCTCCCCCAAGTGAAGGGCAGCACCGCC GCGGCCGCGTGGAGGGAGGGAGGAGGGGGGCGCGCGGAGGCGGAGGGGATCTTCGGGGGG TGGGGGAGGGGCGGCGTTGGTGTTGGGTTGGGGTGGAGCGGAATCCTGTGCTGGAGTGGA TTGATGGAGGAGAGGAGGAGATTGGGAGGGGGACGAGCGGTGCGAACTAGATAAGTGGTT CGGAATCGGATCCTCCTCCTCGCTGAGTGTGGGCGCAAGTCTACGAGTTCCCCGATCTCA CCACGCGACGGCAACCGCGAGATTGGCTCCGGATAAGGTGTTTGATACCATGGCTGCTGC CGCGGAGCCACCCATGGTGGAGCAAGTGATCACCGAGTTTTTCGCCAAGAGCCTCCACAT CATACTGGAGTCGCGCTCTCCGTACGAGTCGTCGCGCAACTTCACGCGGCCCTCGCCACC GTCCTCGCCGCTGTCCGGGAGCCAGCCACGCGACCGGTGGTTCAACCTTGCGCTCCGGGA CTGCCCGGCTGTGCTCGAGAACTTTGACCTGTGGCGGCAGAGCAACCTTGAGCCGTTGGT CATTGACATTGTCCTCTTATGCCGGGACAGCACCAGCAACACAGCTGCTGGGAGTGGGAA GATAATAGAGAGGTGGGTGATACAGTATGAAGCTCGCAAGTCTGGCGGTGGCAATGGTAA TGGCAGCAAGAACAATGGCAGGAAGTCTAGGAACAGCTCGGCTGAGGATCATAGCTTGTA CAGGGCTACCTACCAGGGATCGACAGTGTTACTCCGGTCATTGCATCTGCTCGTCAGGCT CTTGCCAGCATACAGTCTCTTCAGGGAACTGAACTCATCTGGGAGAATCCGTCCTCTCAA CCTGTCACACAAGATATCTTCATTTGTTGAGCCATTCACCCGGGCAGAGGATGCAGAGAT GAAACACTATGCATTTGCTCCAATTGAAACTCTGTTTGGCCGATTGAGCTTGTCAGTTTC TTATGTGCCAGTGTTGGAGGTGGTGGCAGCTTCAGAACCTACATCACCAATGCCACCAGA GATCATAACGGATTACGTTGGGAGCCCCACAACTGACTTTCTAAAGAAATTCAATTCCCT CCCTTCAGCTGGCATTGCACCTGCATGTGCTGCAATGACCAGGAGGCACAGTTGGAGTAT TGAGCATGGAGCTGGAACGTCAGTGTCGCCATCTCCTTCTCCCACTAAGGCACAATCCCG TGGAAGCCCACAGCTAGGCGTTCCTCTGCATGTTTCTCTAAAAACATGCTCACATCCACA AAATGCATCATCCTCTGGGCAGAAGAAATATACACCATTTGAAGAATGCTATCCATCACC ACCATTGTCACCATCACCATCCCAATCCCCTTCAGCTAACTACCCTAAAAACCCTTTGTT CCGATATGAGAGTGCACCAGTTACTATTCCCACATTGAAGTCAGGCGGAGGAGGAGGTAG CGGGTTGCCTCCTTCTCCATGTTCGAAGGGTAAGCACCAGTTCTCATCTCACAATGACAA CCTGGCACATTCCCCTGATCATAACTCAAATGTAAGGAAGGATCTAGTCAGGTTGGGTGA ATTTGAAAAGGACATGGCCTTGCAAAAGGTATTATCTTACAGTAAATATGATTTGGGATA CTTTCATGGACTGAAATTGACTCGGACATCAAGTAAACTTTTTATTATGGATGAACTGGA TGAACATGAATTGGTTTTTGCATGGGAAGATAGAGACACCATAATTGATCAGCTTAACAG GGCTGATATCTCAGACAGGGAGGAACAGAAGAACCAAGATGCTGGTGGCTCGTCCACAAG GTCTCCAGCTGCAGCCATTGGTGCTCTTGTGCATCTGCTGAAGACTGCACCAAGCCTCAG AGAAGGCCTACAGTCAGATGCAGCTGCTGTGGTTCCTCAAGAACCTTCGTCAGTTCAGAA GGTCGTGACTGAGGAACATGGCAGCATCGCATCAAGTTCTACACCGGTGACGGCAACTGA CGCCCTTGAGGAGCTGAAGAAATACAGGGAGGTTAAAGAATCAATACTAAATCGCGGCAA AACACAGGTCAGCGGCACCAATCTAGGAGAGAAACTCACAGATGGAGAACCTTAGCATAT ATAGTATGATGACGAAAGTTTTCGTTTTGTATATATTATATATGTAGCGCGCGTTAGCTG ACTATCTATACCTTAAGCAAGCTAGTAGCTACTAGGATGTTACCAACTCTATATATATTT ACGGGATGACATATATATCCATCCATGCAGCTGCTCTGAGATGATCTGAGGCTGTGGGAT TTTGTAAAGCTGAAATGATTATCTGCAGCGCATGCAGGCAGTGAGATGCAATCAAATGGT TCAGTTCAACCATGTTGGTTCAGTAGAATTTCGTTGTTTCC