Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0161100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2978444:2981470:1 gene:Os11g0161100 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0161100-01)
Sequence

ATGGCCGGAGAGGAAGAAGGTGGTTTGACGGAGGCGAGCACGGTGGCTGCATTTCTCGGC
GTTCCCTGGGATTCTCATCGGAGGCCGCCGGATTCAGTGTTCGCTCCGGTCAATCGCCGC
CGCGCCCCCAGAGCTCTGGTTAGCATGGAGATTATGATTTCTGCTGTGGCAGGTGATCTT
ATCAGCCGGTTCATCTCTTCGGTAGCACAAAATTACAGAAACCATATACGTAAGGAGGAT
GATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTGTGTTGTTGAGGAAGCAGAG
GGGCGCCACATCACAAATCAAGGAATGCTCCTGCAGCTAAAGGGATTTATTGAGGGATTC
TACCTCGGATACTACGTGCTCGACAAGATCAAGTTCCAACCCCCTGAAGAAGAAAGCATC
GAAGATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCAGCCTGTAACTCTCGCAAG
CGCTTTCGTTTTGCTGATGCCATAAGAAAACACACACCAATAGCCTTTGGTAGCAGGAGC
AGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAA
TTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGTCAGCCTTACAGTACATATCTA
TACATAGAGAATTGTATGTTTGGCAGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTG
CTTTGCAATGATCCTCATGATCCGTATGTTAGCATTCTTCCTATTATTGGCCCACCAAGG
ATTGGAAAGAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCAACTGCTTC
TCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCC
AAGGCTTCTCAAGGGAAATATTTGTTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCA
GCTTGGACAAAATTCCAATCATATTTGCAGAATATGCCCGGTATTGGAATTAAGGTTGTA
GTGATAGGTACAACAGAGGACATTGCTAAGTTTGGGACAACCCAACCCATCAGGGTGAAG
AGGCCATCCGAAGAAGAGTTTTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTATGGAT
CCTGATGAACATCCGAAACTAGCATCTCTGGTCATGCAGCTAGCTACTGAGGTGAATGGA
TCATTTCTTTCTGCAACTATATATGGTGAACTATTAAGAGCTAATCCTAACACTCAATTC
TGGAAGAGAATCTTATTATTCGTAAGAGAGCTTGCACGGAAGCACTTGACTTCCTCTGGT
CTACACCCTGACGATCTTTTCGAAAGAAATATCCCTGTCGATATGAGCAGGATAGCCGTT
GTGGATGGTCAAGTTCAAGGTTGCCTGCTTTATGATGTTAGGGTCGCTGGCCCTGCAGAT
GGTGAGCTACCAAAACTGACATCACGAGACATGCTACTGGGTTGTGATATTCCTGTCGAA
GATAAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTACTGTAACTACATAGTT
ACGTATGAGAAACGAAAACCGCGACGCATGGTTCGTAAGAGGAACACGATCTACCTCTGA

Peptide Sequence

PEP ID

Os11t0161100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2978444:2981470:1 gene:Os11g0161100 transcript:Os11t0161100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0161100-01)
Sequence

MAGEEEGGLTEASTVAAFLGVPWDSHRRPPDSVFAPVNRRRAPRALVSMEIMISAVAGDL
ISRFISSVAQNYRNHIRKEDDRRRLERILLRMHCVVEEAEGRHITNQGMLLQLKGFIEGF
YLGYYVLDKIKFQPPEEESIEDEVSHEIQSFALSACNSRKRFRFADAIRKHTPIAFGSRS
RTNLKDVVDGLETKIADMREFVILLGSHPRLPRQPYSTYLYIENCMFGSRIEKEQVINFL
LCNDPHDPYVSILPIIGPPRIGKKTLVQHACLDERVRNCFSHIFFFKEDDLKTGELSLNS
KASQGKYLFVIEFIWDVDEAAWTKFQSYLQNMPGIGIKVVVIGTTEDIAKFGTTQPIRVK
RPSEEEFWYYFKALAFGSMDPDEHPKLASLVMQLATEVNGSFLSATIYGELLRANPNTQF
WKRILLFVRELARKHLTSSGLHPDDLFERNIPVDMSRIAVVDGQVQGCLLYDVRVAGPAD
GELPKLTSRDMLLGCDIPVEDKFDVLVWRSRIPPYCNYIVTYEKRKPRRMVRKRNTIYL

Transcript Sequence

Transcript ID

Os11t0161100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2978444:2981470:1 gene:Os11g0161100 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0161100-01)
Sequence

CTTCCCTTCATCCCGCCGCCGCCGGTCGCCGGGCGGCGGCGGCGGCGAGGTTTCCTCCAC
TGGTCGCCCCAGAATTTTAATAGAGTGCTGGATCAAGAAGAAACCGGCGTAAAAAAAAAA
TCAGTGGAGAACGTAGAGAGAGATGGATGGCCGGAGAGGAAGAAGGTGGTTTGACGGAGG
CGAGCACGGTGGCTGCATTTCTCGGCGTTCCCTGGGATTCTCATCGGAGGCCGCCGGATT
CAGTGTTCGCTCCGGTCAATCGCCGCCGCGCCCCCAGAGCTCTGGTTAGCATGGAGATTA
TGATTTCTGCTGTGGCAGGTGATCTTATCAGCCGGTTCATCTCTTCGGTAGCACAAAATT
ACAGAAACCATATACGTAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGA
TGCACTGTGTTGTTGAGGAAGCAGAGGGGCGCCACATCACAAATCAAGGAATGCTCCTGC
AGCTAAAGGGATTTATTGAGGGATTCTACCTCGGATACTACGTGCTCGACAAGATCAAGT
TCCAACCCCCTGAAGAAGAAAGCATCGAAGATGAGGTGAGTCATGAGATTCAGTCATTTG
CCTTGTCAGCCTGTAACTCTCGCAAGCGCTTTCGTTTTGCTGATGCCATAAGAAAACACA
CACCAATAGCCTTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAG
AAACTAAGATTGCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTAC
CACGTCAGCCTTACAGTACATATCTATACATAGAGAATTGTATGTTTGGCAGCCGTATTG
AGAAGGAGCAAGTCATCAATTTCTTGCTTTGCAATGATCCTCATGATCCGTATGTTAGCA
TTCTTCCTATTATTGGCCCACCAAGGATTGGAAAGAAAACTCTTGTGCAACATGCTTGCC
TGGATGAGAGGGTGCGCAACTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGA
AGACCGGAGAGCTCTCGCTTAACTCCAAGGCTTCTCAAGGGAAATATTTGTTTGTTATTG
AGTTCATTTGGGATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATA
TGCCCGGTATTGGAATTAAGGTTGTAGTGATAGGTACAACAGAGGACATTGCTAAGTTTG
GGACAACCCAACCCATCAGGGTGAAGAGGCCATCCGAAGAAGAGTTTTGGTACTACTTCA
AGGCACTTGCTTTTGGAAGTATGGATCCTGATGAACATCCGAAACTAGCATCTCTGGTCA
TGCAGCTAGCTACTGAGGTGAATGGATCATTTCTTTCTGCAACTATATATGGTGAACTAT
TAAGAGCTAATCCTAACACTCAATTCTGGAAGAGAATCTTATTATTCGTAAGAGAGCTTG
CACGGAAGCACTTGACTTCCTCTGGTCTACACCCTGACGATCTTTTCGAAAGAAATATCC
CTGTCGATATGAGCAGGATAGCCGTTGTGGATGGTCAAGTTCAAGGTTGCCTGCTTTATG
ATGTTAGGGTCGCTGGCCCTGCAGATGGTGAGCTACCAAAACTGACATCACGAGACATGC
TACTGGGTTGTGATATTCCTGTCGAAGATAAGTTTGATGTGCTGGTCTGGAGATCTCGCA
TTCCACCCTACTGTAACTACATAGTTACGTATGAGAAACGAAAACCGCGACGCATGGTTC
GTAAGAGGAACACGATCTACCTCTGAGAATACACAGACACAAATCTTAATCTGGGGGAAA
ATTTTCTAGAAAGAATACATTGTCTACGCTTTGACAATATAGTTTAGAAGGCTGGGTATG
CCTTCACAGATTCTAGCTACTACTGATTATTCAGACAGTTTAGGTGAAAGGAGCATATGT
CATACTATTGTAGTTTCATGGATGTCTTCATTCTTGGAGAACTGCTATTGTATCTGTTCT
TACTAGTTTGGGTATGTATAATTCAGTTAGTTACTATTGCTACCCTGCTAGCGTCATGTG
TGTGACAGAATAGTTCACAAAAGAAGCTACTTTCTGTTTC