Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0161000-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:2971164:2974308:1 gene:Os11g0161000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0161000-01)
Sequence	TTCCGAGTTCTTTCTTTGTCTTACTTTTGGAAGAGAAAATTCTGGCTCAGGAAGAGCCAT CTCGTGTTAAATGCTTCCAGTACCTGTTACTATTTTCTTGTAGACTTGTCTTGGTCTCTT TGCCTACTTCTTTGTAACCTTCTAGATTCTAGAAGCCTGGGTCACTTTGCAAACTCCCAT TTTGACCATTTGCTTCCAAGCAGAGCTCTGGTGAGCATGGAGATTCTGATTTCTGCTGTG GCAACTGATCTTATCAGCCGGTTCATCTCTTCGGTAACACAAAATTACAGAAACCATATA CATAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTGAGGATGCACTCTGTTGTT GAGGAAGCAGGGGGACGCCATATCACAAATCAAGGAATGATCCTGCAGCTAAAGGGACTT GTTGAGGGATTCTACCTCGGATACTACATGCTCGACAAAATCAAGTTCCAACCCCCCGAA TATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCTGCCTGTAACTCTGCCAAGCGC TTTCGTTTTGCTGATGCCATAAGCAAACGCACACCAGTAGCCTTTGGTAGCAGGAGCAGA ACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATTGCAGATATGAGGGAATTT GTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGCCAGCCTTACAGTACATATCTATAC ATAGATAACTGTATGTTCGGTCGCCGTATTGAGAAGGAGCAAGTCATCAATTTCTTGCTT TGCAATGATCCTCATGATCCATATGTTAGCATTCTTCCTATTATTGGCCCTCAAAGGATT GGGAAAAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGGGTGCGCGATTGCTTCTCC CATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAGCTCTCGCTTAACTCCAAG GCTTCTCAAGGGAAATATTTATTTGTTATTGAGTTCATTTGGGATGTGGATGAGGCAGCT TGGACAAAATTCCAATCATATTTGCAGAATATGCCCGCTACTGGAATTAAGGTTGTAGTG ATAGGTAGAACAGAGGACATTGCTAAGTTTGGTACTAGCCAACCCATCAGGGTGAAGAGG CTATCTGAAGAAGAGTACTGGTACTACTTCAAGGCACTTGCTTTTGGAAGTATGGATCCT GATGAGCATCCAAAACTAGCATCTCTGGCCATGCAGCTATCTACTGAGATGAATGGATCA TTTCTTGGTGCAACTATGTTTGGTGAACTATTAAGAGCTAATCCTAACACTCAATTCTGG AAGAGAATCTTATTATTCTTAAGAGAGCTGGCACGAAAGCACTTGACTTCCTCTGGTCTA CACCCTGAGGATCTTTTCGAAAGAAATATCCCTGTTGATTTGAGCAGGATAGCCGTTGTG GATGGTCAAGTTCAAGATTTCATGGTTTATGATGTTAGGGTGGCTGGCCCTGCAGAAGGT GAGCTACCAAAGCTGACGTCACGAGACATACTACTGGGTGGTGATATTCCTGTTGAAGAT AAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTACTGTAACTACATAGTTACG TATGAGAAACAAAAACCGCGACGCATGGTTGGTAAGAGGAACACGATCTACCTCTGA

Peptide Sequence

PEP ID	Os11t0161000-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:2971164:2974308:1 gene:Os11g0161000 transcript:Os11t0161000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0161000-01)
Sequence	FRVLSLSYFWKRKFWLRKSHLVLNASSTCYYFLVDLSWSLCLLLCNLLDSRSLGHFANSH FDHLLPSRALVSMEILISAVATDLISRFISSVTQNYRNHIHKEDDRRRLERILLRMHSVV EEAGGRHITNQGMILQLKGLVEGFYLGYYMLDKIKFQPPEYEVSHEIQSFALSACNSAKR FRFADAISKRTPVAFGSRSRTNLKDVVDGLETKIADMREFVILLGSHPRLPRQPYSTYLY IDNCMFGRRIEKEQVINFLLCNDPHDPYVSILPIIGPQRIGKKTLVQHACLDERVRDCFS HIFFFKEDDLKTGELSLNSKASQGKYLFVIEFIWDVDEAAWTKFQSYLQNMPATGIKVVV IGRTEDIAKFGTSQPIRVKRLSEEEYWYYFKALAFGSMDPDEHPKLASLAMQLSTEMNGS FLGATMFGELLRANPNTQFWKRILLFLRELARKHLTSSGLHPEDLFERNIPVDLSRIAVV DGQVQDFMVYDVRVAGPAEGELPKLTSRDILLGGDIPVEDKFDVLVWRSRIPPYCNYIVT YEKQKPRRMVGKRNTIYL

Transcript Sequence

Transcript ID	Os11t0161000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2971164:2974308:1 gene:Os11g0161000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os11t0161000-01)
Sequence	GCGGAAAGGTCCCTACCGTTTTTGCAAATCATCCCGCCGCCGCCGCCTCCGGTCGGTCGC CGGGATGCAGCGCGGGCGGCGGCGGCGGCGGAGGCGGAGGCGGAGGTGAGGTTTTCGCCA TTGGCCGCCCCAGAATTTCAATAGAGCGCTGGAACAAGAGGAAATCGGCGTAAAAAAATA TCAGAGGAAAACATAGAGAGGAAGGTGGTTTGACGGAGGTGTGCGTGGCCTGGGATTCTC GTCGGAGGCCACCGGATTCGAGGTTTGCTCCGGTCACTCGCCGCCGCGCGCCCCGGTGAG TCGACACCTTTAGAGCTTTGGATCTGGCTGTGTGCATGCATCGGGATTTTGCAACTAATC TGGTGATAGTATCGATAGATAGCTTGTGTACAGTTTCGTGCGAGATCTACAACTAATCTG ATTGGCAATGTTCATCTTCTTTGGCTACGATCATGCTGGTCATTATGGTTTAATCTGCTT GAACTAATCCCTCTAGAAAGTATACAATTGAGTCAGGATTTGTCAGTTTTTTTTTCTATT GGCAATGTTCATCTTCTTCGGCTGGATAGTAGTATGGTATAGTAGCCACTTTTGCTTAAT TAAATGATTTAAACCCATCATTCCATTAGTCCTTCGCTCTTGATAAGGCGGCGAGAACAA CTTAGTGAGTTGCCACTTACTATGTTACAAGGAATTTACCTGGGGTGTAAACACTGTCAA CCTCACTACAAATGGTACTGTTTGTAAGCACATTGAAAATATCTTCCTCTTGGAAGGCTG AGCACAAACTATTTTACACCTGAATGCATGTAAATTCATGTCTATTTCAAAGGAAAGAAA GGAACATAGCTGTTAAATCATATCTAATTACCTCTTCGTAAAGGAAGGAATTACAGCTTT GACAATTGACCTCATACATCAAAAGGCTGTGATCTATTCACCAATTGTCCAATTCTCACA ACTACTGCAAGCTACTACCTCCATTTCATATTATAAGTCATTTTGACTTTTTTTCATGTT ATATTCATGTCAAACTGGTATATGTCTCTACACCATCTCTATATAGAATAAGTGTTTCTT TTGAAAACATATTCTTTTGTATCTGCTCTTGTTAATTTGAATATTTGAAAGCAGTCAGTT AGACAGTTACTATTGCTGCTCTGTCTAGTACCATATTCATGAAAGGAACCTTTTGAAAAG AAACTAAATACTTTATAGTTCCGAGTTCTTTCTTTGTCTTACTTTTGGAAGAGAAAATTC TGGCTCAGGAAGAGCCATCTCGTGTTAAATGCTTCCAGTACCTGTTACTATTTTCTTGTA GACTTGTCTTGGTCTCTTTGCCTACTTCTTTGTAACCTTCTAGATTCTAGAAGCCTGGGT CACTTTGCAAACTCCCATTTTGACCATTTGCTTCCAAGCAGAGCTCTGGTGAGCATGGAG ATTCTGATTTCTGCTGTGGCAACTGATCTTATCAGCCGGTTCATCTCTTCGGTAACACAA AATTACAGAAACCATATACATAAGGAGGATGATCGTAGGAGGCTGGAACGCATCTTGCTG AGGATGCACTCTGTTGTTGAGGAAGCAGGGGGACGCCATATCACAAATCAAGGAATGATC CTGCAGCTAAAGGGACTTGTTGAGGGATTCTACCTCGGATACTACATGCTCGACAAAATC AAGTTCCAACCCCCCGAATATGAGGTGAGTCATGAGATTCAGTCATTTGCCTTGTCTGCC TGTAACTCTGCCAAGCGCTTTCGTTTTGCTGATGCCATAAGCAAACGCACACCAGTAGCC TTTGGTAGCAGGAGCAGAACAAACCTGAAAGATGTTGTTGATGGTTTAGAAACTAAGATT GCAGATATGAGGGAATTTGTCATTCTCCTTGGTAGCCACCCTCGTCTACCACGCCAGCCT TACAGTACATATCTATACATAGATAACTGTATGTTCGGTCGCCGTATTGAGAAGGAGCAA GTCATCAATTTCTTGCTTTGCAATGATCCTCATGATCCATATGTTAGCATTCTTCCTATT ATTGGCCCTCAAAGGATTGGGAAAAAAACTCTTGTGCAACATGCTTGCCTGGATGAGAGG GTGCGCGATTGCTTCTCCCATATATTTTTCTTTAAAGAAGACGATCTGAAGACCGGAGAG CTCTCGCTTAACTCCAAGGCTTCTCAAGGGAAATATTTATTTGTTATTGAGTTCATTTGG GATGTGGATGAGGCAGCTTGGACAAAATTCCAATCATATTTGCAGAATATGCCCGCTACT GGAATTAAGGTTGTAGTGATAGGTAGAACAGAGGACATTGCTAAGTTTGGTACTAGCCAA CCCATCAGGGTGAAGAGGCTATCTGAAGAAGAGTACTGGTACTACTTCAAGGCACTTGCT TTTGGAAGTATGGATCCTGATGAGCATCCAAAACTAGCATCTCTGGCCATGCAGCTATCT ACTGAGATGAATGGATCATTTCTTGGTGCAACTATGTTTGGTGAACTATTAAGAGCTAAT CCTAACACTCAATTCTGGAAGAGAATCTTATTATTCTTAAGAGAGCTGGCACGAAAGCAC TTGACTTCCTCTGGTCTACACCCTGAGGATCTTTTCGAAAGAAATATCCCTGTTGATTTG AGCAGGATAGCCGTTGTGGATGGTCAAGTTCAAGATTTCATGGTTTATGATGTTAGGGTG GCTGGCCCTGCAGAAGGTGAGCTACCAAAGCTGACGTCACGAGACATACTACTGGGTGGT GATATTCCTGTTGAAGATAAGTTTGATGTGCTGGTCTGGAGATCTCGCATTCCACCCTAC TGTAACTACATAGTTACGTATGAGAAACAAAAACCGCGACGCATGGTTGGTAAGAGGAAC ACGATCTACCTCTGAGAATAGACAGACACAAATCTTAATCTGGGGGAAAAATTTCTAGAA AGAAATTACATTGTCTACGCTTCGACAATATAGTTTAGAAGGCTGGGTATGCCTTTCACA GATTCTAGCTACTACTGATTATTTAGTCAGTTTAGGTGAAAGGAGTATATGTGATGCTAT TGTAGGTTCGGATGCCTTCTTTCTTAGAGAACTGCTATTGTATCTGTTTTTACTAGTTTG GGTATGTAAAATTCTGTTAGTTACT