Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0160700-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:2954818:2958807:-1 gene:Os11g0160700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0160700-01);Hypothetical conserved gene. (Os11t0160700-02)
Sequence	ATGCCGCGCCGCTCCGCCTCCCGGTACGCCGCCTACTGGGCCGCCGACGCGCTCGCCGGC GACGACGCCCTCGACTTCTCCCTCACCAAGGCGCTGGTGGGCGTCTCGCCGGATTCCCTC ACGGGCGCCCCCGAGGCCGTGCGGGAGCGCGTCGCGCTGCGGTGCCTCCAGGAGGTCGTC TCCCTCGCCTCCGATGGCGACTACGAGGCCACGCCGACGGCCGGAGGGGTGCTTAGTGTG GACGCCTCCCGCTCCTGCGAGGACTCGCTGCTTCAACTCATCCGAGAGATTGGTAGCTCA GGAAGCTTGGAGAAGGTTATGCTTCTGCCCTTTAGTCAAGATGTCCAGAAGTTTATATGT ATAAAGAGACCTACATTACCTGAAACTTCTTTTGAACTGCTCAGAGAAGTTTACCCAGAG ATCACACCTGTGGTCCTACCATCGCCAGTGGAGCAGAATGGCAATGATCAACATGACAAT GTCAGCCATGATCTTGAAAATACAGAGAAGACTGGGTTCAATACAGATGGCGCTCAGCTT CAGCAAGATGATCTGGCAAATTTAGTCAACGAAAGTAACACAGGAAATCTTCAGAAGGAT GCAATGGCAACTCCTGATTTTCACCAACCATGTACATCAGAAAATAGGTGTTTTGATCAG CCACAAGAAGATTCAATTAATGCAGTTGGTGTCAACATCAGGTCTCCAAAAGACAGTCCA ACTAATGTAGATAGACACATACAAGTTGCAGCTGAGCCTTCTTTAGCTACTTCTGCAGAT TTGCTGGGAAGTAATACAGGAACAATTTCTGAGCAGGACATGATAGATGATACAACCATG GTTCAATCGCAATCTCAAGGGGTCAAAAATCCTAATACACTTCATTATAATAATGGAGAT GAACCACTTGTTGCCAGCATTCAGTCACCAAAGGATTCCATCCATGAAGGACTGACCATA CAGGCAACTGTTTCTCCAGCTTTTGACAGAAGCAATGATGCTTTACCAGCAAGTACATCT GAAATAAGCCAGTTGCCTGAGTTTATTACTGCAAGGGATACAGTAATGAATTCAGAGCCA CGTATCAACAAATCTCATCCAAATTCCCCGAAACATGACACTGTTGATAAAGCAAATCAA GATGTGGATTATGGCAGTGTTGGTATTCAGAAAGCTGCTGCTTTCCTATCTGAAGATCGC AATGGGGCTACTCAAGGAGAGAAATCTGAAATTAAAGATCCACCAGAAAATACTGCAGAA CATACAAAAATGTTTGAACAAGAAAATAGTGTCGAGGCTCAGTTGGAAGTCGGTTGTTCC GACAAAGTTAATCAAGATATACAGGATGATGGCAACATCATGACAAAGAATATGGTCTGT GATGGGCTGAATGTGCAGACTGCTCCGGAACCTCATAGCTGCAGAATGGCCTTGCATAAC AAAAATTTGGTGGCCAACCATTTGTCCGAGCAGAATATTGGAAGGAACACAACTGCTGTT GAGAAAGATTGCTGCAGTATTCCAACCTCTCCTCAGGTTGTTAATGACACAAGAGTGAAG CAACCTTCAAACAAGAGAACCATGGGGAATACTGTGGTAGAAACATCGCATGTGCATTCT TCAGATGATAGTCTCAGTGGCTTCGCAGCCACCGGTCTTCTGTCAATGGCTGACAAAATA CCATTCTGTACTCAGGATCAAGATGCCAACGGTCCTGTTGAGGGCTTGTCAGAACAAGAT TTGTGCATAAAGTGTGGTAAAGATGGCCAGTTGTTGAAATGCAGCAGCTGCTTGTTAGCG GCTCATGATACATGTTTTGGTTCATTAGCGACATTGGATGATTCTGGCCAGTTGTATTGT CCTGTATGCTTCTATACTAAAGCAACTGAAGCATATCAAAAGGCAAAGAAAACGTATTCT GAAGCAAGGAAAAACCTATCAGCTTTCCTTGGTAGAAAGCAATTAGCTGAGCAACATCAG CAAGCTGCAGTGGGGCAAAGAGCTGCCAACAACGAGGATCATTTGAATGGGTGTAACGAT GCATCTAAAAGGAAAGATAATCATCAATCTGAAGGAAATAACCTTTCTCATAGGGATGAA GACCCTACCCGGAAGAGGAAGAAGCAGAAGACAAATGCTACTAGTGATGCTTGCGCTCAG GAAGTAGTCACTGAAAAGGTACCAGTTGTTCAGAATTCTGATGTTGCACCCATG

Peptide Sequence

PEP ID	Os11t0160700-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:2954818:2958807:-1 gene:Os11g0160700 transcript:Os11t0160700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0160700-01);Hypothetical conserved gene. (Os11t0160700-02)
Sequence	MPRRSASRYAAYWAADALAGDDALDFSLTKALVGVSPDSLTGAPEAVRERVALRCLQEVV SLASDGDYEATPTAGGVLSVDASRSCEDSLLQLIREIGSSGSLEKVMLLPFSQDVQKFIC IKRPTLPETSFELLREVYPEITPVVLPSPVEQNGNDQHDNVSHDLENTEKTGFNTDGAQL QQDDLANLVNESNTGNLQKDAMATPDFHQPCTSENRCFDQPQEDSINAVGVNIRSPKDSP TNVDRHIQVAAEPSLATSADLLGSNTGTISEQDMIDDTTMVQSQSQGVKNPNTLHYNNGD EPLVASIQSPKDSIHEGLTIQATVSPAFDRSNDALPASTSEISQLPEFITARDTVMNSEP RINKSHPNSPKHDTVDKANQDVDYGSVGIQKAAAFLSEDRNGATQGEKSEIKDPPENTAE HTKMFEQENSVEAQLEVGCSDKVNQDIQDDGNIMTKNMVCDGLNVQTAPEPHSCRMALHN KNLVANHLSEQNIGRNTTAVEKDCCSIPTSPQVVNDTRVKQPSNKRTMGNTVVETSHVHS SDDSLSGFAATGLLSMADKIPFCTQDQDANGPVEGLSEQDLCIKCGKDGQLLKCSSCLLA AHDTCFGSLATLDDSGQLYCPVCFYTKATEAYQKAKKTYSEARKNLSAFLGRKQLAEQHQ QAAVGQRAANNEDHLNGCNDASKRKDNHQSEGNNLSHRDEDPTRKRKKQKTNATSDACAQ EVVTEKVPVVQNSDVAPM

Transcript Sequence

Transcript ID	Os11t0160700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2954818:2958807:-1 gene:Os11g0160700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0160700-01);Hypothetical conserved gene. (Os11t0160700-02)
Sequence	GACTCCGCCACCACCGCAATGCCGCGCCGCTCCGCCTCCCGGTACGCCGCCTACTGGGCC GCCGACGCGCTCGCCGGCGACGACGCCCTCGACTTCTCCCTCACCAAGGCGCTGGTGGGC GTCTCGCCGGATTCCCTCACGGGCGCCCCCGAGGCCGTGCGGGAGCGCGTCGCGCTGCGG TGCCTCCAGGAGGTCGTCTCCCTCGCCTCCGATGGCGACTACGAGGCCACGCCGACGGCC GGAGGGGTGCTTAGTGTGGACGCCTCCCGCTCCTGCGAGGACTCGCTGCTTCAACTCATC CGAGAGATTGGTAGCTCAGGAAGCTTGGAGAAGGTTATGCTTCTGCCCTTTAGTCAAGAT GTCCAGAAGTTTATATGTATAAAGAGACCTACATTACCTGAAACTTCTTTTGAACTGCTC AGAGAAGTTTACCCAGAGATCACACCTGTGGTCCTACCATCGCCAGTGGAGCAGAATGGC AATGATCAACATGACAATGTCAGCCATGATCTTGAAAATACAGAGAAGACTGGGTTCAAT ACAGATGGCGCTCAGCTTCAGCAAGATGATCTGGCAAATTTAGTCAACGAAAGTAACACA GGAAATCTTCAGAAGGATGCAATGGCAACTCCTGATTTTCACCAACCATGTACATCAGAA AATAGGTGTTTTGATCAGCCACAAGAAGATTCAATTAATGCAGTTGGTGTCAACATCAGG TCTCCAAAAGACAGTCCAACTAATGTAGATAGACACATACAAGTTGCAGCTGAGCCTTCT TTAGCTACTTCTGCAGATTTGCTGGGAAGTAATACAGGAACAATTTCTGAGCAGGACATG ATAGATGATACAACCATGGTTCAATCGCAATCTCAAGGGGTCAAAAATCCTAATACACTT CATTATAATAATGGAGATGAACCACTTGTTGCCAGCATTCAGTCACCAAAGGATTCCATC CATGAAGGACTGACCATACAGGCAACTGTTTCTCCAGCTTTTGACAGAAGCAATGATGCT TTACCAGCAAGTACATCTGAAATAAGCCAGTTGCCTGAGTTTATTACTGCAAGGGATACA GTAATGAATTCAGAGCCACGTATCAACAAATCTCATCCAAATTCCCCGAAACATGACACT GTTGATAAAGCAAATCAAGATGTGGATTATGGCAGTGTTGGTATTCAGAAAGCTGCTGCT TTCCTATCTGAAGATCGCAATGGGGCTACTCAAGGAGAGAAATCTGAAATTAAAGATCCA CCAGAAAATACTGCAGAACATACAAAAATGTTTGAACAAGAAAATAGTGTCGAGGCTCAG TTGGAAGTCGGTTGTTCCGACAAAGTTAATCAAGATATACAGGATGATGGCAACATCATG ACAAAGAATATGGTCTGTGATGGGCTGAATGTGCAGACTGCTCCGGAACCTCATAGCTGC AGAATGGCCTTGCATAACAAAAATTTGGTGGCCAACCATTTGTCCGAGCAGAATATTGGA AGGAACACAACTGCTGTTGAGAAAGATTGCTGCAGTATTCCAACCTCTCCTCAGGTTGTT AATGACACAAGAGTGAAGCAACCTTCAAACAAGAGAACCATGGGGAATACTGTGGTAGAA ACATCGCATGTGCATTCTTCAGATGATAGTCTCAGTGGCTTCGCAGCCACCGGTCTTCTG TCAATGGCTGACAAAATACCATTCTGTACTCAGGATCAAGATGCCAACGGTCCTGTTGAG GGCTTGTCAGAACAAGATTTGTGCATAAAGTGTGGTAAAGATGGCCAGTTGTTGAAATGC AGCAGCTGCTTGTTAGCGGCTCATGATACATGTTTTGGTTCATTAGCGACATTGGATGAT TCTGGCCAGTTGTATTGTCCTGTATGCTTCTATACTAAAGCAACTGAAGCATATCAAAAG GCAAAGAAAACGTATTCTGAAGCAAGGAAAAACCTATCAGCTTTCCTTGGTAGAAAGCAA TTAGCTGAGCAACATCAGCAAGCTGCAGTGGGGCAAAGAGCTGCCAACAACGAGGATCAT TTGAATGGGTGTAACGATGCATCTAAAAGGAAAGATAATCATCAATCTGAAGGAAATAAC CTTTCTCATAGGGATGAAGACCCTACCCGGAAGAGGAAGAAGCAGAAGACAAATGCTACT AGTGATGCTTGCGCTCAGGAAGTAGTCACTGAAAAGGTACCAGTTGTTCAGAATTCTGAT GTTGCACCCATG