Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0160550-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:2950018:2951434:1 gene:Os11g0160550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GRAS family transcription factor containing protein. (Os11t0160550-00)
Sequence	ATGGAGACTATGTCATATCCTTGTTCCCCTCTTCTCTCCTTCCCTGCACACGAAGAGAGT GGGTATTTCATATGGTCTTCTCAAGCAGCTCTCCATGTTGATCCTTGTTCTGATCAACAA GAGGACCTTGATTTACTTGACACCATGGTGCTAGATTCTAATGAGTTGCATCAACATGAT GCTCCTGATGTTGATGTGTCTATTAATTGTGATGATAGAATTTTTGGCCAAGAGAGTGTC AACTTGGCAGCAATCCAAGAGGAGCTCTTGGAGGAGGACAGTTTAAGCGACCTCCTCCTT GCTGGTGCAGAGGCGGTCGAGGCAGGAGATTCAATCCTTGCATCAGTAGCATTCTCGAGG CTTGATGACTTCCTGTCTGGGATACCTGAAAATGGAGCAGCCAGTTCTTTCGATCGATTG GCATACCACTTTGACCAAGGTCTGCGTTCCCGGATGTCCAGTGCATCCACTGGGTGTTAT CAGCCAGAGCCACTTCCATCTGGTAACATGTTGGTGCACCAGATCATACAAGAGCTATCA CCATTTGTTAAGTTTGCACACTTCACTACCAATCAGGCCATCCTAGATGCCATCATTGGT GACATGGATGTCCATGTCGTCGACTTGAACATCGGCGAGGGCATCCAGTGGTCATCACTC ATGTCGGACCTTGCTCGCTGTGGCGGTAAGTCCTTCAGACTAACAGCTATCACAACATAT GCTGACTGTCACGCTAGCACTCATGACACAGTTGTACGGCTGTTATCGGAGTTTGCCGAC TCTTTGGAACTTCCATTTCAATACAATTCCATCTGTGTTCACAATGAGGATGAACTGCAT GCCTTCTTCGAGGACTGTAAAGGCTCAGTGATTGTCTCATGTGATACAACAAGTATGTAT TACAAGTCACTAAGCACATTGCAGAGTTTACTGCTTGTCTGTGTCAAGAAGCTACAGCCT AAGCTAGTGGTCACCATAGAAGAGGACCTAGTTAGAATTGGAAGAGGGGTATCTCCATCT AGTGCCTCCTTTGTCGAGTTCTTCTTCGAGGCATTGCATCACTTCACCACGGTGTTCGAG TCAATGGCGAGTTGCTTCATTGGTAGTAGTTATGAACCATGCCTGAGACTTGTGGAGATG GAGTTGCTGGGGCCAAGGATACAGGATTTTGTGGTGAAGTATGGGTCAGTGAGAGTTGAG GCCAATGCTTCTGAGGTTTTGGAAGGGTTTATGGCTTGTGAGTTGAGTGCTTGCAACATA GCTCAGGCCAGGATGCTAGTTGGGCTGTTCAACAGGGTGTTTGGGGTTGTGTGTGAGAAG GGAAGGCTTGCTTTGTGCTGGAAATCTAGGCCCTTGATCTCGGTGTCTGTTTGGATTCCT GTGTGA

Peptide Sequence

PEP ID	Os11t0160550-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:2950018:2951434:1 gene:Os11g0160550 transcript:Os11t0160550-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GRAS family transcription factor containing protein. (Os11t0160550-00)
Sequence	METMSYPCSPLLSFPAHEESGYFIWSSQAALHVDPCSDQQEDLDLLDTMVLDSNELHQHD APDVDVSINCDDRIFGQESVNLAAIQEELLEEDSLSDLLLAGAEAVEAGDSILASVAFSR LDDFLSGIPENGAASSFDRLAYHFDQGLRSRMSSASTGCYQPEPLPSGNMLVHQIIQELS PFVKFAHFTTNQAILDAIIGDMDVHVVDLNIGEGIQWSSLMSDLARCGGKSFRLTAITTY ADCHASTHDTVVRLLSEFADSLELPFQYNSICVHNEDELHAFFEDCKGSVIVSCDTTSMY YKSLSTLQSLLLVCVKKLQPKLVVTIEEDLVRIGRGVSPSSASFVEFFFEALHHFTTVFE SMASCFIGSSYEPCLRLVEMELLGPRIQDFVVKYGSVRVEANASEVLEGFMACELSACNI AQARMLVGLFNRVFGVVCEKGRLALCWKSRPLISVSVWIPV

Transcript Sequence

Transcript ID	Os11t0160550-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2950018:2951434:1 gene:Os11g0160550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GRAS family transcription factor containing protein. (Os11t0160550-00)
Sequence	ATGGAGACTATGTCATATCCTTGTTCCCCTCTTCTCTCCTTCCCTGCACACGAAGAGAGT GGGTATTTCATATGGTCTTCTCAAGCAGCTCTCCATGTTGATCCTTGTTCTGATCAACAA GAGGACCTTGATTTACTTGACACCATGGTGCTAGATTCTAATGAGTTGCATCAACATGAT GCTCCTGATGTTGATGTGTCTATTAATTGTGATGATAGAATTTTTGGCCAAGAGAGTGTC AACTTGGCAGCAATCCAAGAGGAGCTCTTGGAGGAGGACAGTTTAAGCGACCTCCTCCTT GCTGGTGCAGAGGCGGTCGAGGCAGGAGATTCAATCCTTGCATCAGTAGCATTCTCGAGG CTTGATGACTTCCTGTCTGGGATACCTGAAAATGGAGCAGCCAGTTCTTTCGATCGATTG GCATACCACTTTGACCAAGGTCTGCGTTCCCGGATGTCCAGTGCATCCACTGGGTGTTAT CAGCCAGAGCCACTTCCATCTGGTAACATGTTGGTGCACCAGATCATACAAGAGCTATCA CCATTTGTTAAGTTTGCACACTTCACTACCAATCAGGCCATCCTAGATGCCATCATTGGT GACATGGATGTCCATGTCGTCGACTTGAACATCGGCGAGGGCATCCAGTGGTCATCACTC ATGTCGGACCTTGCTCGCTGTGGCGGTAAGTCCTTCAGACTAACAGCTATCACAACATAT GCTGACTGTCACGCTAGCACTCATGACACAGTTGTACGGCTGTTATCGGAGTTTGCCGAC TCTTTGGAACTTCCATTTCAATACAATTCCATCTGTGTTCACAATGAGGATGAACTGCAT GCCTTCTTCGAGGACTGTAAAGGCTCAGTGATTGTCTCATGTGATACAACAAGTATGTAT TACAAGTCACTAAGCACATTGCAGAGTTTACTGCTTGTCTGTGTCAAGAAGCTACAGCCT AAGCTAGTGGTCACCATAGAAGAGGACCTAGTTAGAATTGGAAGAGGGGTATCTCCATCT AGTGCCTCCTTTGTCGAGTTCTTCTTCGAGGCATTGCATCACTTCACCACGGTGTTCGAG TCAATGGCGAGTTGCTTCATTGGTAGTAGTTATGAACCATGCCTGAGACTTGTGGAGATG GAGTTGCTGGGGCCAAGGATACAGGATTTTGTGGTGAAGTATGGGTCAGTGAGAGTTGAG GCCAATGCTTCTGAGGTTTTGGAAGGGTTTATGGCTTGTGAGTTGAGTGCTTGCAACATA GCTCAGGCCAGGATGCTAGTTGGGCTGTTCAACAGGGTGTTTGGGGTTGTGTGTGAGAAG GGAAGGCTTGCTTTGTGCTGGAAATCTAGGCCCTTGATCTCGGTGTCTGTTTGGATTCCT GTGTGAAACCAGAGGAGATTCTGGTGCTTTTATGGGC