Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0160100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:2909410:2918095:-1 gene:Os11g0160100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0160100-01)
Sequence	ATGAATGTCTTGTGTGAAGTGTGTGGAGATGTTGGTTGGGAAGAACTTATCTTGCACTGC AACAAATGCAAGAATGCAACTAGGCACCAATACTGTTTTGATCCAGTTATTTATGATGGA TCATTAGTAGAGTGGTTATGTGATGATTGCCTACCAAATGGCAATGAAGTGGGCAACTTA TTAGATATATCTAATCAAAAGAAATCAAGTCAAACTGAACTTGGTTTCTCTATAACTAAG GAAACAAATGTGAAGAAGATGAAACTAACAAAGGGATTATGGTCATGGGGACATCATCGA AATAGATCATTCAAGGCAAGATGTGATGGTAGTGATTCAAAGACTAAGCATTTCGCAAGT GGAAATGCATTTAGTTCTTCCGAAGTGGTCACCGGGGAAATATCCAAAATAAATGATTGT GAGATGGAAGGGAGAGGTAAAAATGAATATTCAAGCCATTCAGCTTTGGACCATGCTTCA AGAGTTGAACAACACATCAATATACAAAATCCAATGGGCATTATAAAACCTAGTTTGAAC TCTATTAAGAGATTAAACCTCTCGAATGAAAAGGATGACCGCTTTTCTTCATCCGACCAT GTTGAGGGATCCATTCCCCAAGTTAATCATGTTGAGCGAGCCCATCTAATGATTGAGGAT GGTTCTAATCCTACATTTACATGTGTGGAACATATGGATTTGGTGCACAAAAAGCAATTA TTGCAACCTTCCTCTCTAGAAAGAAATTCTATAGGCACATCAATACCATGTTCGGAGAAT ATGGATGTGTTGCACAAGATGCAACTCTTGAAACCTTCCCCTCTAGACAAAAAATATGTG GACAGATCCATACCGAACTCAGAAAATATGGATGTGGTGCTGATGAGAAGGAGCTGTACA TTGAATAATTCAATGGGCAGTTGTGAAAAACAAGTCGTAACCAAGGTGGATCCGATCGAG CCATCAAGGCAATTTGATCGGGCTTGCTTGGAGGTCTCTTCAAATGCACATGAGATACAT GAGGCTGATGACGGTTCTAAAGGCGCTCAAAGTATCAAGAATGGCAAGCCGAAGAAACAA AGACGACTTATTTTACCATATGAGGAAGATAAAGATGCCGAGCCCATCCAAGTAGATGAC ATGAATCGCCAATCTTGTGGGATTAATGGACAAGTGAAGAAGCCTGTGGAAATTGTTGCA TCTCTTGGGGATATAAATGCTGGATGCGGTCAGAATGTTTGTTCACAGTTAGCATTACCA ACTATAGCTGTCAAGGGCCAATGTGGCCTATCCAGTACACCATTCATACCCAAATATTTT TGTGTGCAACCCATTGATGAACCTAATTGGACTGGAATCATGAAGATAGGTACAAACTAC ATTCCAGTGGGTGCACACTTCTCAAACAAAGCATGCAAGAAGGTGTGTGAACTATCTATG TCGTTGCCACAAATAATGAAAGTGACAGAGCTCCCTAAGTTGAAAGCCTGGCCTAAGAGT TGGGAGAAGGCATCAGTACCTAGTGCTGAGAGTATTGGCTTATTTTTCTTTTCACAGAAT ACGAGGTCAAATAAAGAATTTGATGACCTAGTGAAGCATGTCATTGATTATGATATTGTT CTAGAAACTGATGTTAGTTTTGCCAAGCTGCTAGTCTTCCCTTCTGTTGTACTTCCAGCT GAATATCGGGTATTCCAAGGAAAACACTATTTGTGGGGAGTGTTCAAACGCAGTAAAGAT ATGGCTGAAAGAGATGCCTTAGTGGAACAGAATTGTACGACATGTCTGGCAGATGAAGAT GTCCCAGAACAGAATGCCTTAGATATTGTGCCATGTAAAGCCCTGGATCAAGAAATGGCG CTTGTTGTGAGCGATATACATCATGATAATCAACCATCGCTAACCACAAGCCAAGTGGTA GAAAGCGAGGCTTCATCTGACAAAGGCCCATCCCATCCTGTGATTAACTCCCCTGAAAGA CCCATGTACCTGATTTTGGATACAAGTTGCAAGGTCCTAAAGAAATGGAGCTGCGAAAGG ATGGATACGAAGTTATCGATGCTTTAG

Peptide Sequence

PEP ID	Os11t0160100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:2909410:2918095:-1 gene:Os11g0160100 transcript:Os11t0160100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0160100-01)
Sequence	MNVLCEVCGDVGWEELILHCNKCKNATRHQYCFDPVIYDGSLVEWLCDDCLPNGNEVGNL LDISNQKKSSQTELGFSITKETNVKKMKLTKGLWSWGHHRNRSFKARCDGSDSKTKHFAS GNAFSSSEVVTGEISKINDCEMEGRGKNEYSSHSALDHASRVEQHINIQNPMGIIKPSLN SIKRLNLSNEKDDRFSSSDHVEGSIPQVNHVERAHLMIEDGSNPTFTCVEHMDLVHKKQL LQPSSLERNSIGTSIPCSENMDVLHKMQLLKPSPLDKKYVDRSIPNSENMDVVLMRRSCT LNNSMGSCEKQVVTKVDPIEPSRQFDRACLEVSSNAHEIHEADDGSKGAQSIKNGKPKKQ RRLILPYEEDKDAEPIQVDDMNRQSCGINGQVKKPVEIVASLGDINAGCGQNVCSQLALP TIAVKGQCGLSSTPFIPKYFCVQPIDEPNWTGIMKIGTNYIPVGAHFSNKACKKVCELSM SLPQIMKVTELPKLKAWPKSWEKASVPSAESIGLFFFSQNTRSNKEFDDLVKHVIDYDIV LETDVSFAKLLVFPSVVLPAEYRVFQGKHYLWGVFKRSKDMAERDALVEQNCTTCLADED VPEQNALDIVPCKALDQEMALVVSDIHHDNQPSLTTSQVVESEASSDKGPSHPVINSPER PMYLILDTSCKVLKKWSCERMDTKLSML

Transcript Sequence

Transcript ID	Os11t0160100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2909410:2918095:-1 gene:Os11g0160100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0160100-01)
Sequence	CGTTTCCTTCTCTCCGCTGCTGCAGCCGCGCTGGTTCCGCGCTCCTGTTCTTCTTGGCTT CTCGCCATGGGGAGGAAAGAGGGTCGGAGGAGAGAGATTGACAGGGATCTGCGGGTTTCT TGCGTCGGTTCCGGGGCTTGATGCGTGAGAGGAGCTTCTGAAGTCGCAGGAAAAAATGAA TGTCTTGTGTGAAGTGTGTGGAGATGTTGGTTGGGAAGAACTTATCTTGCACTGCAACAA ATGCAAGAATGCAACTAGGCACCAATACTGTTTTGATCCAGTTATTTATGATGGATCATT AGTAGAGTGGTTATGTGATGATTGCCTACCAAATGGCAATGAAGTGGGCAACTTATTAGA TATATCTAATCAAAAGAAATCAAGTCAAACTGAACTTGGTTTCTCTATAACTAAGGAAAC AAATGTGAAGAAGATGAAACTAACAAAGGGATTATGGTCATGGGGACATCATCGAAATAG ATCATTCAAGGCAAGATGTGATGGTAGTGATTCAAAGACTAAGCATTTCGCAAGTGGAAA TGCATTTAGTTCTTCCGAAGTGGTCACCGGGGAAATATCCAAAATAAATGATTGTGAGAT GGAAGGGAGAGGTAAAAATGAATATTCAAGCCATTCAGCTTTGGACCATGCTTCAAGAGT TGAACAACACATCAATATACAAAATCCAATGGGCATTATAAAACCTAGTTTGAACTCTAT TAAGAGATTAAACCTCTCGAATGAAAAGGATGACCGCTTTTCTTCATCCGACCATGTTGA GGGATCCATTCCCCAAGTTAATCATGTTGAGCGAGCCCATCTAATGATTGAGGATGGTTC TAATCCTACATTTACATGTGTGGAACATATGGATTTGGTGCACAAAAAGCAATTATTGCA ACCTTCCTCTCTAGAAAGAAATTCTATAGGCACATCAATACCATGTTCGGAGAATATGGA TGTGTTGCACAAGATGCAACTCTTGAAACCTTCCCCTCTAGACAAAAAATATGTGGACAG ATCCATACCGAACTCAGAAAATATGGATGTGGTGCTGATGAGAAGGAGCTGTACATTGAA TAATTCAATGGGCAGTTGTGAAAAACAAGTCGTAACCAAGGTGGATCCGATCGAGCCATC AAGGCAATTTGATCGGGCTTGCTTGGAGGTCTCTTCAAATGCACATGAGATACATGAGGC TGATGACGGTTCTAAAGGCGCTCAAAGTATCAAGAATGGCAAGCCGAAGAAACAAAGACG ACTTATTTTACCATATGAGGAAGATAAAGATGCCGAGCCCATCCAAGTAGATGACATGAA TCGCCAATCTTGTGGGATTAATGGACAAGTGAAGAAGCCTGTGGAAATTGTTGCATCTCT TGGGGATATAAATGCTGGATGCGGTCAGAATGTTTGTTCACAGTTAGCATTACCAACTAT AGCTGTCAAGGGCCAATGTGGCCTATCCAGTACACCATTCATACCCAAATATTTTTGTGT GCAACCCATTGATGAACCTAATTGGACTGGAATCATGAAGATAGGTACAAACTACATTCC AGTGGGTGCACACTTCTCAAACAAAGCATGCAAGAAGGTGTGTGAACTATCTATGTCGTT GCCACAAATAATGAAAGTGACAGAGCTCCCTAAGTTGAAAGCCTGGCCTAAGAGTTGGGA GAAGGCATCAGTACCTAGTGCTGAGAGTATTGGCTTATTTTTCTTTTCACAGAATACGAG GTCAAATAAAGAATTTGATGACCTAGTGAAGCATGTCATTGATTATGATATTGTTCTAGA AACTGATGTTAGTTTTGCCAAGCTGCTAGTCTTCCCTTCTGTTGTACTTCCAGCTGAATA TCGGGTATTCCAAGGAAAACACTATTTGTGGGGAGTGTTCAAACGCAGTAAAGATATGGC TGAAAGAGATGCCTTAGTGGAACAGAATTGTACGACATGTCTGGCAGATGAAGATGTCCC AGAACAGAATGCCTTAGATATTGTGCCATGTAAAGCCCTGGATCAAGAAATGGCGCTTGT TGTGAGCGATATACATCATGATAATCAACCATCGCTAACCACAAGCCAAGTGGTAGAAAG CGAGGCTTCATCTGACAAAGGCCCATCCCATCCTGTGATTAACTCCCCTGAAAGACCCAT GTACCTGATTTTGGATACAAGTTGCAAGGTCCTAAAGAAATGGAGCTGCGAAAGGATGGA TACGAAGTTATCGATGCTTTAGTTACCCTCCAAAAAGAAAAAAAATCCATCCTACATGCA GTCCTCCCTGTTCCATTTTAGAAGATTCAGCATCCGAGCCGTTTGCCTTCATCATTCCAC AGACAGCATCGATCCAAGGAGCTTATTCAAGAGACTGAAAATGAAGATGGACTGTTGTTT TTTGCACACTGGGTTGGCGAAACCTTGGCCTAGGAGGCACTGATAATGGTGTAGGACAAG AACTTGGTCATGATGATCGATCGTGTCGTGGTTACTGTTTCTAGTTATGGTGCAGCACAT TGACCCCTCTCCTGGGGTAAAAGCGCAAGCTATGAAGTGGTCCTAAAACTTTTTACCATG GAGCGAGTTCATTGCGCCTTTGGTGGCTATGTGCTGTTTTACATGAATCTCTAGTTAAAC CTCCTTTTTTTGATGACCGAGCTGTGGACTGTAGTTGTCCCTGGCTGTTCAGGATGTATC ATCCTACTCAATCAGAGTTGAATTGCCCCCAAAGTTTCACTGCACTCTCTGGTGATTGTC ATCAGTAAAACTTGCAGCATGAATTTGTACATGATTCTTAAGCAACCTCACCTAGAACTG TCATGCATGAAGTGCCATCACTACTCTGCAAGTCTATTTGAAAAAAAGTTGGTTC