Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0156800-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2697883:2699704:1 gene:Os11g0156800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0156800-01)
Sequence

GGGAGCTACCAGGTGTACATGAAGTGCAGGGCCGCCGGGCAGCCGCCGCTCGAGGCCGTC
TGGGAGCTCCACCCCGTCGTCGTCCCCGACGGCGGCCTCGCCTTGAGCCTCACCTGCAGT
GAAGCTTCACAAGCTACTCATCAAGCGGCGGCGCCAACAGCTGGGTGGCCCTTCGTCAAT
GGCGCCGGCGAGGCGGCGGCGACGACGGCGAGCCCGACCATTCCGCCGTGGCTTCGCCGG
TATCAAGATCCAGATCACGCCACGCCGGCGAGCTGCGGCACCGGTTTGCAGATACAAGAT
CTGTGGAATCCCATGAGAAATGGATCAGCACCACACCACACATCCGAGCTTACATTGAGT
TTCTCCTCTCCATCACCTTCTTCCATCTCAGGATATACCAGCTGCTACAACAACAACAAC
ATGATGAGCTCCAAGCCATGGCAACTCGAAGCGAGGCAGCCATGGCCAATTCATGGACAT
GAAGGTCAGAGAATGGCCATGGCATCATATCATGATCATCATCCGTTGGATACAAACCCT
AGCCCAGAGTCCAACTCGGTGTCCAATTCATTGGATGGCGGTGAGACGAGGCGGCCCAAG
TTCATCGAGCTCAATGCAGAGAACCTCAAGATCTTGTGCAATGCGCTCGAGAGCCGCGTC
CCGCAACATAGCAACATTGTTCCAGACATTGCGAGCACCGTGCTCCAATGTCGATCCGGC
ATGAAGAAGATGAAGTTGAGGCATAAGGAGATCATCAAGGCAAGCTCAACTACTTGGTTA
CTATTCCAAGGAAGAGATGTTGATGGTAAGAAGGCCATGGCACAAGAGCTCGCAAAGCTT
GTCTTTGGTTCATCTACCGAGTTCTCTTCCATCTCCTTCGATGAGCTCACATCGCCCTAC
TCCGATTCTAGCTCCGGTGAGCTCACCCTCAAGAGGCAAAGATCAGCAGACAGCAATGAG
CATAGCTTTGCGCAGAGACTATGTGAAATTGTGAGCAAAAACCCACACCAGGTCATAGTG
ATCAATGACATTGAGCAACTTGATCAAGATTCAGAAATTAGTATCAAGAAAGCGATTGCG
AACGGAAGAATGAGAGGATGCACCGGTGAAGAAGTTGATTTCGAGGATGCTATCATAGTG
TTGAGCTATGAAGAAGAATTCGATTCGAGGTCTAGGGCTTCCTCCTCCCCTCGGGTCAAG
CAGAGGCTCATGAACAATAATGATGATGAAGAAAGTAGCAGCACGGAGAAGGGAGATAAT
TCACCACAACGTTTTAGCTTGGATTTGAATGCATGTCTCGAGGATGAAGAAGAGGATGAG
GGGTTTTTGCTAATTGATAATGGTGTGGGGATGCATGATATTGTGGATGGTGTTTTCTTC
TTCGGGTTGATGGCAGATTTCTGA

Peptide Sequence

PEP ID

Os11t0156800-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2697883:2699704:1 gene:Os11g0156800 transcript:Os11t0156800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0156800-01)
Sequence

GSYQVYMKCRAAGQPPLEAVWELHPVVVPDGGLALSLTCSEASQATHQAAAPTAGWPFVN
GAGEAAATTASPTIPPWLRRYQDPDHATPASCGTGLQIQDLWNPMRNGSAPHHTSELTLS
FSSPSPSSISGYTSCYNNNNMMSSKPWQLEARQPWPIHGHEGQRMAMASYHDHHPLDTNP
SPESNSVSNSLDGGETRRPKFIELNAENLKILCNALESRVPQHSNIVPDIASTVLQCRSG
MKKMKLRHKEIIKASSTTWLLFQGRDVDGKKAMAQELAKLVFGSSTEFSSISFDELTSPY
SDSSSGELTLKRQRSADSNEHSFAQRLCEIVSKNPHQVIVINDIEQLDQDSEISIKKAIA
NGRMRGCTGEEVDFEDAIIVLSYEEEFDSRSRASSSPRVKQRLMNNNDDEESSSTEKGDN
SPQRFSLDLNACLEDEEEDEGFLLIDNGVGMHDIVDGVFFFGLMADF

Transcript Sequence

Transcript ID

Os11t0156800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2697883:2699704:1 gene:Os11g0156800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0156800-01)
Sequence

TCGGGAGCTACCAGGTGTACATGAAGTGCAGGGCCGCCGGGCAGCCGCCGCTCGAGGCCG
TCTGGGAGCTCCACCCCGTCGTCGTCCCCGACGGCGGCCTCGCCTTGAGCCTCACCTGCA
GTGAAGCTTCACAAGCTACTCATCAAGCGGCGGCGCCAACAGCTGGGTGGCCCTTCGTCA
ATGGCGCCGGCGAGGCGGCGGCGACGACGGCGAGCCCGACCATTCCGCCGTGGCTTCGCC
GGTATCAAGATCCAGATCACGCCACGCCGGCGAGCTGCGGCACCGGTTTGCAGATACAAG
ATCTGTGGAATCCCATGAGAAATGGATCAGCACCACACCACACATCCGAGCTTACATTGA
GTTTCTCCTCTCCATCACCTTCTTCCATCTCAGGATATACCAGCTGCTACAACAACAACA
ACATGATGAGCTCCAAGCCATGGCAACTCGAAGCGAGGCAGCCATGGCCAATTCATGGAC
ATGAAGGTCAGAGAATGGCCATGGCATCATATCATGATCATCATCCGTTGGATACAAACC
CTAGCCCAGAGTCCAACTCGGTGTCCAATTCATTGGATGGCGGTGAGACGAGGCGGCCCA
AGTTCATCGAGCTCAATGCAGAGAACCTCAAGATCTTGTGCAATGCGCTCGAGAGCCGCG
TCCCGCAACATAGCAACATTGTTCCAGACATTGCGAGCACCGTGCTCCAATGTCGATCCG
GCATGAAGAAGATGAAGTTGAGGCATAAGGAGATCATCAAGGCAAGCTCAACTACTTGGT
TACTATTCCAAGGAAGAGATGTTGATGGTAAGAAGGCCATGGCACAAGAGCTCGCAAAGC
TTGTCTTTGGTTCATCTACCGAGTTCTCTTCCATCTCCTTCGATGAGCTCACATCGCCCT
ACTCCGATTCTAGCTCCGGTGAGCTCACCCTCAAGAGGCAAAGATCAGCAGACAGCAATG
AGCATAGCTTTGCGCAGAGACTATGTGAAATTGTGAGCAAAAACCCACACCAGGTCATAG
TGATCAATGACATTGAGCAACTTGATCAAGATTCAGAAATTAGTATCAAGAAAGCGATTG
CGAACGGAAGAATGAGAGGATGCACCGGTGAAGAAGTTGATTTCGAGGATGCTATCATAG
TGTTGAGCTATGAAGAAGAATTCGATTCGAGGTCTAGGGCTTCCTCCTCCCCTCGGGTCA
AGCAGAGGCTCATGAACAATAATGATGATGAAGAAAGTAGCAGCACGGAGAAGGGAGATA
ATTCACCACAACGTTTTAGCTTGGATTTGAATGCATGTCTCGAGGATGAAGAAGAGGATG
AGGGGTTTTTGCTAATTGATAATGGTGTGGGGATGCATGATATTGTGGATGGTGTTTTCT
TCTTCGGGTTGATGGCAGATTTCTGACATTTTCCTTGTTAATTTGGCAAACAAATTAACC
TAGAGTAATTTTTCATGTTTTATTTTCCATTTTGTACCAAGTTGATAGTCCTAGATATCT
TGTAAAAGAATTTGGGTGTATTTCTACAATGAATTGGCATGGTCCTTTGTGGAAATTATG
TAGAAGGAAAGCAAGCATGCATGTATATTATCTTTGAGCTAATGGTAGTAGTTTTTAATT
ATAAT