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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0156600-00
CDS Infomation

cds chromosome:IRGSP-1.0:11:2683005:2684962:1 gene:Os11g0156600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0622F05.7 protein. (Os11t0156600-00)
Sequence

ATGCCGGCGTTCGAGTGCTTCAAGACGCTGGAGACGCGACCCGACGACGCGCACATGCTC
CGCTTCTGGTGCCAGTACTGGATCATAGTGTCCATGGTGATAGCTTGTGAGAGCTTCGTC
TCATGGATGCCAATGTATGGAGAAATTAAGCTAGCTTTCTTTGTTTATCTGTGGTATCCC
AAAACGAAGGGCAGTGATGTGGTGTATGACTCCTTCATTCGGCCTACAGTGATGCAATAC
GAACCAAATATTGAGCAGAGGCTTGAGCATCTTAGAGCTAACTCTGGCCAGCTGATAGCA
TTCTACATCAAGAACTTCGCTGACAAAGGGACAGCTTTCTTCATGGACTTCCTGCGCTAT
GTTGTTTCTGAAAGACCTGAAGCAGCAGCAAATTCAGAGCCGGTAATTAACACGCTTCTT
CTTTTCCCTATATCAGAACAGATACATCGTGATATTATCAACTGA

Peptide Sequence

PEP ID

Os11t0156600-00
PEP Infomation

pep chromosome:IRGSP-1.0:11:2683005:2684962:1 gene:Os11g0156600 transcript:Os11t0156600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0622F05.7 protein. (Os11t0156600-00)
Sequence

MPAFECFKTLETRPDDAHMLRFWCQYWIIVSMVIACESFVSWMPMYGEIKLAFFVYLWYP
KTKGSDVVYDSFIRPTVMQYEPNIEQRLEHLRANSGQLIAFYIKNFADKGTAFFMDFLRY
VVSERPEAAANSEPVINTLLLFPISEQIHRDIIN

Transcript Sequence

Transcript ID

Os11t0156600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2683005:2684962:1 gene:Os11g0156600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0622F05.7 protein. (Os11t0156600-00)
Sequence

ATGCCGGCGTTCGAGTGCTTCAAGACGCTGGAGACGCGACCCGACGACGCGCACATGCTC
CGCTTCTGGTGCCAGTACTGGATCATAGTGTCCATGGTGATAGCTTGTGAGAGCTTCGTC
TCATGGATGCCAATGTATGGAGAAATTAAGCTAGCTTTCTTTGTTTATCTGTGGTATCCC
AAAACGAAGGGCAGTGATGTGGTGTATGACTCCTTCATTCGGCCTACAGTGATGCAATAC
GAACCAAATATTGAGCAGAGGCTTGAGCATCTTAGAGCTAACTCTGGCCAGCTGATAGCA
TTCTACATCAAGAACTTCGCTGACAAAGGGACAGCTTTCTTCATGGACTTCCTGCGCTAT
GTTGTTTCTGAAAGACCTGAAGCAGCAGCAAATTCAGAGCCGGTAATTAACACGCTTCTT
CTTTTCCCTATATCAGAACAGATACATCGTGATATTATCAACTGA