Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0155100-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:2568996:2570391:-1 gene:Os11g0155100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 568 description:Similar to F-box domain containing protein. (Os11t0155100-01)
Sequence	AGCTTCAAATCCACACCAAACACAAACACAAAACCTCACAAATTTCGCCAAGTCGCGGCA CACGTCACGGACACGTACACAGAAGGAAAGAAAAGGGTTGCAGCGATGGATGAGCTCCGT GCTCCGGCGTGCGGCGGCGGCGTCGGGACGGTGATCGAGGACCTTCCGACGGACGTCCTC GCGCTCGTGCTCCGGCGGCTCGACGGCGCGTCGCTGGCGGCGGTGGGGTGCGCGTGCTCC AGCTTCCGCGAGCTCGCCGTCGACCAGGAGACGTGGCGCGGCCTCTGCCTCGCCCTGTGG CCGTCGGTTCGCGACGTGCTCGGCTGCGGCGGCGGCGGCGGCGGAGACGGGTACCGTGCG TTCTTCGCCGACGCGTTCCCGTTCCCGGAGGCAGCGGCGGCGGTGGCGTCGGCGGCGCCG GCGCCGGTGCCCGGGTCCCTCCCATCACGCCTCGTCTCCGCCGTTGACCTGCACCACGGC GGCGTCTGCATCATGTCGCGCGTCGTGGAGACGGACACCTCGTCGGCGTGGTTCCTGGGC TCGCCGTTCCGCGTCGACGCGCTCGTCCAGGAGGGCTTCTCGGCGCCGTCGCCGATCACG CCGAGCTCGCTGACGCTGAGCTGGATACTCATCGACCCCGCGTCCGGCCGCGCCATGAAC GCCTCGAGCCGACGCCCGGTGGCCGTCGACCGGAAGTGGCTCACCGGGGAGACGGTGGCG CGGTTCACCGTGATGCTCGGCGGCGGCGTCGCCCTCGACGCGGCCGTCACCTGCGACGAC AGGTACGGGCACGTCAGGGAGGTGAGCCTGTGCGTCGAGGACGGCGAGGGCGGCGGCGTG AGCGGCCAGGACGGGCTGGGCGCGGTGGCCGCGGCCATGGCGGGCGCGCGGCGGGGCAAG GGCGCGGAGGCGGCGGCGAGGCAGCGGTACGAGGAGTTCGTGAAGGGGAAGAGGGCGAGG AAGGAGTGGAAGGCGAGGCGTGAGGGCATCGTCGACCTCTGCTGCTCCGGCGTCGGCGCG GCGGCGTTCGTCGGCTTCCTCGTCATGCTCACCTTCCGGTGA

Peptide Sequence

PEP ID	Os11t0155100-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:2568996:2570391:-1 gene:Os11g0155100 transcript:Os11t0155100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 568 description:Similar to F-box domain containing protein. (Os11t0155100-01)
Sequence	SFKSTPNTNTKPHKFRQVAAHVTDTYTEGKKRVAAMDELRAPACGGGVGTVIEDLPTDVL ALVLRRLDGASLAAVGCACSSFRELAVDQETWRGLCLALWPSVRDVLGCGGGGGGDGYRA FFADAFPFPEAAAAVASAAPAPVPGSLPSRLVSAVDLHHGGVCIMSRVVETDTSSAWFLG SPFRVDALVQEGFSAPSPITPSSLTLSWILIDPASGRAMNASSRRPVAVDRKWLTGETVA RFTVMLGGGVALDAAVTCDDRYGHVREVSLCVEDGEGGGVSGQDGLGAVAAAMAGARRGK GAEAAARQRYEEFVKGKRARKEWKARREGIVDLCCSGVGAAAFVGFLVMLTFR

Transcript Sequence

Transcript ID	Os11t0155100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2568996:2570391:-1 gene:Os11g0155100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 568 description:Similar to F-box domain containing protein. (Os11t0155100-01)
Sequence	AACTTTGCTTTTCAGCAACGCAAGCTATAGTTTCAAAAGCGCATTGCATATGCTCCCAAA TTGAGCTGCAGCAGGAGGAAAAGCCTCTCGCTTTCAGACCGTGATCACTTACCATCCTCA CAAATATATATACAAACCAAACTAAAGCTTCAAATCCACACCAAACACAAACACAAAACC TCACAAATTTCGCCAAGTCGCGGCACACGTCACGGACACGTACACAGAAGGAAAGAAAAG GGTTGCAGCGATGGATGAGCTCCGTGCTCCGGCGTGCGGCGGCGGCGTCGGGACGGTGAT CGAGGACCTTCCGACGGACGTCCTCGCGCTCGTGCTCCGGCGGCTCGACGGCGCGTCGCT GGCGGCGGTGGGGTGCGCGTGCTCCAGCTTCCGCGAGCTCGCCGTCGACCAGGAGACGTG GCGCGGCCTCTGCCTCGCCCTGTGGCCGTCGGTTCGCGACGTGCTCGGCTGCGGCGGCGG CGGCGGCGGAGACGGGTACCGTGCGTTCTTCGCCGACGCGTTCCCGTTCCCGGAGGCAGC GGCGGCGGTGGCGTCGGCGGCGCCGGCGCCGGTGCCCGGGTCCCTCCCATCACGCCTCGT CTCCGCCGTTGACCTGCACCACGGCGGCGTCTGCATCATGTCGCGCGTCGTGGAGACGGA CACCTCGTCGGCGTGGTTCCTGGGCTCGCCGTTCCGCGTCGACGCGCTCGTCCAGGAGGG CTTCTCGGCGCCGTCGCCGATCACGCCGAGCTCGCTGACGCTGAGCTGGATACTCATCGA CCCCGCGTCCGGCCGCGCCATGAACGCCTCGAGCCGACGCCCGGTGGCCGTCGACCGGAA GTGGCTCACCGGGGAGACGGTGGCGCGGTTCACCGTGATGCTCGGCGGCGGCGTCGCCCT CGACGCGGCCGTCACCTGCGACGACAGGTACGGGCACGTCAGGGAGGTGAGCCTGTGCGT CGAGGACGGCGAGGGCGGCGGCGTGAGCGGCCAGGACGGGCTGGGCGCGGTGGCCGCGGC CATGGCGGGCGCGCGGCGGGGCAAGGGCGCGGAGGCGGCGGCGAGGCAGCGGTACGAGGA GTTCGTGAAGGGGAAGAGGGCGAGGAAGGAGTGGAAGGCGAGGCGTGAGGGCATCGTCGA CCTCTGCTGCTCCGGCGTCGGCGCGGCGGCGTTCGTCGGCTTCCTCGTCATGCTCACCTT CCGGTGATCATGCGGCGGCGTCCGGCGAGCGGCGGGGCAGGCATAACGGCATAAGCAGCG TACGTAGCTGGGTACCGTACAATTTCGTTGAGAATGGCAAGAAATGTAAATATGATAAAA GTGGTACTAGTGTCGTAGGAACTGTTATCACAAAATTGGCTAAATTGATAGTAACAAATT TTTCCTGTTTGCTATT