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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0154500-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:2550674:2551929:1 gene:Os11g0154500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 17 description:Blast disease-responsive transcription factor, Disease resistance (Os11t0154500-01);No apical meristem (NAM) protein domain containing protein. (Os11t0154500-02)
Sequence

ATGGCCACCACGAGGAGCGGCGTCGGCGGCGCCATCAGCGACCCATTTGCGACGCCGGGG
TTCCGCTTCTACCCGACGGAGGAGGAGCTTCTCGGCTTCTACCTCCGCCACCGCCTCGCC
GGCACGAGGCCCGACGTCGAGCGCGTCATCCCCGTCGTCGACGTCTACGGCTACCACCCG
TCCCAGCTCGCCGCCCTGGCCGGGGAGGCGAGCGCGCGCGACACGGAGCAGTGGTTCTTC
TTCTGCCCGCGCGCCGAGCGGGAGCTCCACGGCGGCCGGCCGGCGCGCACCACGCCGTCG
GGGTACTGGAAGGCCACGGGATCCCCGTCCTGCGTCATCTCCTCCGCCACAAACAGGGTC
ATCGGCGTCAAGCGCACCATGGTGTTCTACCAGGGCCGCGCCCCCACCGGCACCAAGACC
CGCTGGAAGATGAACGAGTACAAGGCCGTCGCCGACGACGCCGACGCCGCCGCCGCCGCC
ATGCTCCACCCAATGGCGCCTCCCAGGCTGAGGAACGAGCTGGGAGTGTGCCGGGTGTAC
ATCAGCACGGGCACGCTGAGATCGTTCGACCGCCGGCCGCTCGATAATCAAGCGGCGGCG
CCCACCCAGCAACAGGTGATGCCATCTTTGACGGCGGCGGCGGCGGTGAACACGAACCTC
TGCGGCGGCGGCGGCGGCGTCGTGTTCGCCGGTGCACAAGGAGACAGCTCCCGCGACTGC
AGCTCGTCGTCGGGGTCGCGAGAACTCGCCGGCGGCGCCGATGGGTCTGAAGACGACGCC
ATCGACTGGAACTCGCTCATCAGTAGCGCCACTGCTGATGATCTCGGCTTCAACACCGTC
GTTGGTTTTGATCCTAGCATCGTCGGATCATGGCCACAAGTCTAG

Peptide Sequence

PEP ID

Os11t0154500-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:2550674:2551929:1 gene:Os11g0154500 transcript:Os11t0154500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 17 description:Blast disease-responsive transcription factor, Disease resistance (Os11t0154500-01);No apical meristem (NAM) protein domain containing protein. (Os11t0154500-02)
Sequence

MATTRSGVGGAISDPFATPGFRFYPTEEELLGFYLRHRLAGTRPDVERVIPVVDVYGYHP
SQLAALAGEASARDTEQWFFFCPRAERELHGGRPARTTPSGYWKATGSPSCVISSATNRV
IGVKRTMVFYQGRAPTGTKTRWKMNEYKAVADDADAAAAAMLHPMAPPRLRNELGVCRVY
ISTGTLRSFDRRPLDNQAAAPTQQQVMPSLTAAAAVNTNLCGGGGGVVFAGAQGDSSRDC
SSSSGSRELAGGADGSEDDAIDWNSLISSATADDLGFNTVVGFDPSIVGSWPQV

Transcript Sequence

Transcript ID

Os11t0154500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2550674:2551929:1 gene:Os11g0154500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC DOMAIN-CONTAINING PROTEIN 17 description:Blast disease-responsive transcription factor, Disease resistance (Os11t0154500-01);No apical meristem (NAM) protein domain containing protein. (Os11t0154500-02)
Sequence

AGCTACCTCACTCCAACAATCGCCGACCACGATGGCCACCACGAGGAGCGGCGTCGGCGG
CGCCATCAGCGACCCATTTGCGACGCCGGGGTTCCGCTTCTACCCGACGGAGGAGGAGCT
TCTCGGCTTCTACCTCCGCCACCGCCTCGCCGGCACGAGGCCCGACGTCGAGCGCGTCAT
CCCCGTCGTCGACGTCTACGGCTACCACCCGTCCCAGCTCGCCGCCCTGGCCGGGGAGGC
GAGCGCGCGCGACACGGAGCAGTGGTTCTTCTTCTGCCCGCGCGCCGAGCGGGAGCTCCA
CGGCGGCCGGCCGGCGCGCACCACGCCGTCGGGGTACTGGAAGGCCACGGGATCCCCGTC
CTGCGTCATCTCCTCCGCCACAAACAGGGTCATCGGCGTCAAGCGCACCATGGTGTTCTA
CCAGGGCCGCGCCCCCACCGGCACCAAGACCCGCTGGAAGATGAACGAGTACAAGGCCGT
CGCCGACGACGCCGACGCCGCCGCCGCCGCCATGCTCCACCCAATGGCGCCTCCCAGGCT
GAGGAACGAGCTGGGAGTGTGCCGGGTGTACATCAGCACGGGCACGCTGAGATCGTTCGA
CCGCCGGCCGCTCGATAATCAAGCGGCGGCGCCCACCCAGCAACAGGTGATGCCATCTTT
GACGGCGGCGGCGGCGGTGAACACGAACCTCTGCGGCGGCGGCGGCGGCGTCGTGTTCGC
CGGTGCACAAGGAGACAGCTCCCGCGACTGCAGCTCGTCGTCGGGGTCGCGAGAACTCGC
CGGCGGCGCCGATGGGTCTGAAGACGACGCCATCGACTGGAACTCGCTCATCAGTAGCGC
CACTGCTGATGATCTCGGCTTCAACACCGTCGTTGGTTTTGATCCTAGCATCGTCGGATC
ATGGCCACAAGTCTAGTGCTTGATTACGCGTAATATAAAATTAATCGAGTTTAGTGATCA
GTTAGTTTTTTGTTTTTTTGCAAGAAGTTCAAAAATTATTGCTGTGTGTTTTGCACTGAG
TAGCAAAGATGGGAGGATTAGAAGATGAATCGATTAGTTTGCAAATCAGGTGAATTAATT
AGAGTAATTAACATCTGTAGTAATAGTAAGTAGAAAATCAAAATGAGAAGTTGTAGCAGA
AAGTATATACTACCACAAATCCGTTCTTAGTC