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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0154300-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2539779:2542990:1 gene:Os11g0154300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os11t0154300-01)
Sequence

ATGGAGCGCCTCCTGCACTTCCGGCCCCCGAAACCGACCTCTGCCAATGCCGTTGCAGCG
GCGGCTACCGCCGACGGCGACCTCCTCGAGCTCGACGTGCTCTGGCCTGCATCCCGCGCC
CCGGGCCTCCTCGCGGCGCTCCCTGAGGAGGACGGGAAGCGGAGGAGGAAGCGCGGCGGG
AGCGGGAGCGGGAGCGTGGCCGTCCGATCCGCGGCGCGGCCTATCCCGGAGACCGCCGCG
TTGACCCTGGTCCCGTCGTCGTCCGCGGCGGCGATGGCGAAGTCGGCGCCGGTGAGGATA
CCGTCGGAGGCGGCGGCGGCGCGTAGGGGGGTGATGTGGGCGGCGCAGGCGGGCGGCGAG
GACGGGGAGGCGGCCATGGTCCCGCCCCACGAGATCGTGGCGCGGCGCGCCGCGGCGCAC
AGCTCGGTGCTGGAGGGCTCCGGGAGGACGCTCAAGGGGCGCGACCTCCACCGCGTCCGC
AACGCCGTCCTCCGCCGCACCGGCTTCCTCGACTGA

Peptide Sequence

PEP ID

Os11t0154300-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2539779:2542990:1 gene:Os11g0154300 transcript:Os11t0154300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os11t0154300-01)
Sequence

MERLLHFRPPKPTSANAVAAAATADGDLLELDVLWPASRAPGLLAALPEEDGKRRRKRGG
SGSGSVAVRSAARPIPETAALTLVPSSSAAAMAKSAPVRIPSEAAAARRGVMWAAQAGGE
DGEAAMVPPHEIVARRAAAHSSVLEGSGRTLKGRDLHRVRNAVLRRTGFLD

Transcript Sequence

Transcript ID

Os11t0154300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2539779:2542990:1 gene:Os11g0154300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF584 family protein. (Os11t0154300-01)
Sequence

GCCGGCATCGCGGCCACGTCCACCCCAACCTCCCCTTCCGCCGATGCCGGAGCGCCGCCA
CCTCGCCGGAGACTCACCGTGCTGGTGATCATCCTCCGGACAACCCACCATGGAGCGCCT
CCTGCACTTCCGGCCCCCGAAACCGACCTCTGCCAATGCCGTTGCAGCGGCGGCTACCGC
CGACGGCGACCTCCTCGAGCTCGACGTGCTCTGGCCTGCATCCCGCGCCCCGGGCCTCCT
CGCGGCGCTCCCTGAGGAGGACGGGAAGCGGAGGAGGAAGCGCGGCGGGAGCGGGAGCGG
GAGCGTGGCCGTCCGATCCGCGGCGCGGCCTATCCCGGAGACCGCCGCGTTGACCCTGGT
CCCGTCGTCGTCCGCGGCGGCGATGGCGAAGTCGGCGCCGGTGAGGATACCGTCGGAGGC
GGCGGCGGCGCGTAGGGGGGTGATGTGGGCGGCGCAGGCGGGCGGCGAGGACGGGGAGGC
GGCCATGGTCCCGCCCCACGAGATCGTGGCGCGGCGCGCCGCGGCGCACAGCTCGGTGCT
GGAGGGCTCCGGGAGGACGCTCAAGGGGCGCGACCTCCACCGCGTCCGCAACGCCGTCCT
CCGCCGCACCGGCTTCCTCGACTGAGGCGAAGAATAAACGGCTTATGATGCTTACCTTCG
GCGCTAAATAGTTGTGACAGCACTCTTGGGGGGACCATTGCCCCTCAGCAACACAATTCC
TATAAGGAAACATATGGTATGCTCACTGCTCAGTTCACCTCATAGGTCTAGAACTTCTTG
CTATCCCTTGGTTTTTTACGTAATAGAGGGAGTAGTTATGTTGCTTCGTAACCAAAACTT
GGGTGTTTGTGGTTATGGTAAAGGAGTTATGTACACATTTTTGTGTGTTTTCCTGGCTTT
GATTTATTGTTTTATCAATCCTCTCTTACCAAGGTTTTATTCAGACTATCTGAGTAAACA
TGC