Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0153700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:2517481:2521841:1 gene:Os11g0153700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC). (Os11t0153700-01)
Sequence	ATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACCGCCGCCGCCCGC CGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCCTCCGTCCCCGCC CTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCACCCGGCTTCCCG GGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATGTTTGGGCAGCTC ACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAACTGACGAAGGAC AACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCAGATGTGAGTTTG CCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGCACTGATGTGATT CGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAACTTGTACAGTTG ATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACAGTTATCCTATTG GCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCCTATTATCTAAAG AAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCTGCTGCCATTGAT CAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAAGGAACTGAAGCT AAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAGAAAACTGACGTA ATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATGAGTGAGTTGAAA GAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGATGCCATGACTGGA CAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATTACTGGTGCTATA CTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATCAAAGAGGTATCT GGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTTGAGCCTTTCTAT CCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCATTTGTTGAAAAG GCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAGATCCTGAGTGCA AAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAAATGGGTTCATTT AGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCTCAAATTCGTGAA GCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACCCCTGAGGAAAGG GAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTGGCCAAGGAATCC GGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGAATGCGTGCTCAA ATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATGGAAGGCCTCATG GATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGAAGGAGAAAGTAT GGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGACGATGA

Peptide Sequence

PEP ID	Os11t0153700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:2517481:2521841:1 gene:Os11g0153700 transcript:Os11t0153700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC). (Os11t0153700-01)
Sequence	MEATSSTTLALSSPPTAAARRSPAKAIVASHHLRHSSVPALHLRAVPGPSFRALPSPGFP GWRRKRGSGLVVRAEMFGQLTTGLESAWNKLRGTDQLTKDNIAEPMRDIRRALLEADVSL PVVRSFIESVTEKAVGTDVIRGVKPEQQLVKVVNDELVQLMGGEVSDLVFAKTAPTVILL AGLQGVGKTTVCAKLAYYLKKMGKSCMLIAADVYRPAAIDQLTILGKQVGVPVYSEGTEA KPSQIAKNGIKEAKSKKTDVIIVDTAGRLQVDKAMMSELKEVKRAVNPTEVLLVVDAMTG QEAASLVSTFNVEIGITGAILTKLDGDSRGGAALSIKEVSGKPIKFVGRGERMEDLEPFY PDRMAQRILGMGDVLSFVEKAQEVMRQEDAEELQKKILSAKFNFNDFLKQTQAIAQMGSF SRIIGMIPGMNKVTPAQIREAEKNLKFMESMINVMTPEERERPELLAESRERRIRVAKES GKNERQVSQLVAQLFRMRAQMQKMMGAMQGQDTPDMEGLMDSIKAEEQAAAGTGKRRRKY GNLRRRDLDAMRGFRRR

Transcript Sequence

Transcript ID	Os11t0153700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2517481:2521841:1 gene:Os11g0153700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Signal recognition particle 54 kDa protein, chloroplast precursor (SRP54) (54 chloroplast protein) (54CP) (FFC). (Os11t0153700-01)
Sequence	ACGCCACCAAAAATGGAGGCCACCAGTAGTACTACACTAGCGCTCTCCTCGCCGCCCACC GCCGCCGCCCGCCGCTCGCCGGCGAAGGCGATCGTCGCCTCCCACCACCTGCGCCACTCC TCCGTCCCCGCCCTTCACCTCCGCGCGGTCCCCGGCCCCTCCTTCCGCGCCCTCCCCTCA CCCGGCTTCCCGGGATGGAGGAGGAAGAGGGGAAGCGGGCTGGTTGTGCGGGCAGAGATG TTTGGGCAGCTCACGACCGGGCTGGAGTCCGCGTGGAACAAGCTGCGGGGAACAGATCAA CTGACGAAGGACAACATCGCTGAACCAATGCGGGATATCAGAAGAGCACTTTTGGAGGCA GATGTGAGTTTGCCGGTAGTGAGAAGTTTTATTGAGTCCGTTACTGAAAAAGCTGTAGGC ACTGATGTGATTCGAGGTGTCAAGCCTGAGCAACAGCTGGTGAAGGTTGTGAATGATGAA CTTGTACAGTTGATGGGTGGGGAGGTATCAGATTTGGTGTTTGCAAAAACTGCCCCAACA GTTATCCTATTGGCGGGTCTACAAGGTGTTGGGAAAACTACTGTTTGTGCAAAGCTTGCC TATTATCTAAAGAAAATGGGGAAGAGTTGCATGCTGATTGCTGCGGATGTCTACAGGCCT GCTGCCATTGATCAACTCACTATTCTGGGGAAACAGGTTGGGGTTCCAGTTTACTCTGAA GGAACTGAAGCTAAACCTTCACAAATTGCCAAGAATGGCATAAAGGAGGCAAAAAGCAAG AAAACTGACGTAATCATAGTGGATACTGCTGGAAGGCTGCAGGTAGATAAAGCCATGATG AGTGAGTTGAAAGAGGTAAAAAGGGCAGTAAATCCTACAGAAGTTCTACTTGTGGTGGAT GCCATGACTGGACAAGAAGCTGCATCATTGGTTAGCACCTTCAATGTTGAGATTGGTATT ACTGGTGCTATACTGACAAAACTGGATGGTGATTCCAGAGGTGGAGCAGCACTAAGTATC AAAGAGGTATCTGGAAAGCCCATCAAGTTTGTAGGGCGAGGAGAACGCATGGAAGATCTT GAGCCTTTCTATCCTGATCGTATGGCACAACGAATCTTGGGAATGGGAGATGTACTTTCA TTTGTTGAAAAGGCACAGGAAGTGATGCGTCAAGAAGATGCTGAGGAATTACAGAAGAAG ATCCTGAGTGCAAAATTTAACTTCAATGACTTCTTGAAGCAAACACAAGCTATCGCACAA ATGGGTTCATTTAGTCGTATAATTGGCATGATTCCAGGCATGAACAAGGTTACCCCTGCT CAAATTCGTGAAGCGGAGAAAAACCTTAAATTTATGGAGTCCATGATCAACGTAATGACC CCTGAGGAAAGGGAAAGACCAGAGCTACTTGCTGAATCACGCGAGAGGAGGATAAGAGTG GCCAAGGAATCCGGAAAAAACGAACGACAGGTGAGCCAATTGGTTGCGCAGCTCTTCCGA ATGCGTGCTCAAATGCAGAAAATGATGGGTGCTATGCAAGGGCAAGACACCCCTGATATG GAAGGCCTCATGGATTCCATCAAGGCAGAAGAGCAGGCTGCCGCTGGTACTGGAAAGCGA AGGAGAAAGTATGGCAATCTGAGGCGGCGAGACCTGGATGCAATGCGCGGTTTCCGTCGA CGATGAATGTTCATTGGCTCTTTCTGAACCAAAGTGTTTTGATGCCAGTTACATGTATAG GAAGCGAGAATTTGGATGCTTTTGGGGAGCTACTGGTTTGCTGTGATCACCATGTAGTTT CTGTTGTAATTTTTTTCTTTTTTTGAAAAGACGTACTAGTATATCGGTATATGTTGTATT TTTGGCCATCAATTTAGCTCATAAGTTGTGTTCCT