Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0153500-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2506941:2508402:1 gene:Os11g0153500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3049 domain containing protein. (Os11t0153500-01)
Sequence

ATGGCGGCGGACGGCGGCGCGCTGAAGCGGCTGTTCGAGAAGCCGTTGCCGGAGAACCCG
ACGCTGCTGGAGGCGCTGTCGGCGTGGAACCACACCCACCGCAAGAAGCTCGTCGACCCG
GCGTCCTTCACCGAGATCTTCGGCGAGCTCCACTTCCAGGAGAAGCCGCCCGTCGTCGAC
TCCCTCGCTCGCGCCGCCGCCCGCCCCTCGCCGTCGCCGCCGCCTCCGCCCCCGCCACGC
CGCACGGTGTCATGGCTCGACATCACCGACGCCGCCACCGCCGACAACGACAACGACAAG
AGCAAGGATGACTCCTCGCTCGACGCCCTCCTCAAGCCGCCCAGGCCGGCGAGCGGCGGC
GCCACCGTGAAGCGGAGCGCGAGCTTCTGCCTCAAGAGCTCGACGTCGCTGCTGCTCTGC
ACCGAGGGGCTCGGGTCGGAGAGCACCGTGGACGCCGACGACATGGTCAAGGACGGCGAC
GGCAGCGGCGCCGTCGTCGACAGCGGGATGGACGTGGACGACGACGCCAGCGACGTCGCC
GCCGCCGTGGCGGGCGACGACGCCTTCGGCGCCGGAGGGAAGGAGAATCGGCCGCCGCCG
CCGCCGCCGTCGTTCCCGCCGCCGATACGGTCGATCGGGCGCGGCGGGAAGCCGAGTGTG
TGCTTCCGGTCGGTGCGCGCGGAGGGGAGGTTCGTGCTGATGGAGGTGGTCATCCCCGGG
AAGGATCTCCTGCGGGCGACTCGCGAGGGCGGCCGCCTCAGGCTGCAGTTCTCCAACGCC
GCCGCCGCCGCCGCCGCCGCCGTCGGCGTCATCGACGACGAGGAGATGCATGGACAAGAA
GCAGCAGCATGCGTAGGCGGCGACACGTTCGCTTAA

Peptide Sequence

PEP ID

Os11t0153500-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2506941:2508402:1 gene:Os11g0153500 transcript:Os11t0153500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3049 domain containing protein. (Os11t0153500-01)
Sequence

MAADGGALKRLFEKPLPENPTLLEALSAWNHTHRKKLVDPASFTEIFGELHFQEKPPVVD
SLARAAARPSPSPPPPPPPRRTVSWLDITDAATADNDNDKSKDDSSLDALLKPPRPASGG
ATVKRSASFCLKSSTSLLLCTEGLGSESTVDADDMVKDGDGSGAVVDSGMDVDDDASDVA
AAVAGDDAFGAGGKENRPPPPPPSFPPPIRSIGRGGKPSVCFRSVRAEGRFVLMEVVIPG
KDLLRATREGGRLRLQFSNAAAAAAAAVGVIDDEEMHGQEAAACVGGDTFA

Transcript Sequence

Transcript ID

Os11t0153500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2506941:2508402:1 gene:Os11g0153500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3049 domain containing protein. (Os11t0153500-01)
Sequence

ACAGAAAATTACCAGAGCTAAACTGTCTTGCACATCCTTTCACCCTGAGTGACGCAGTAA
TTTGGAGTGTAAAGTTTACTACTAGTACGCGTACTCCTCAAGAACACCTTGTTGGCCGGC
GGCGACTACGCATGGCGGCGGACGGCGGCGCGCTGAAGCGGCTGTTCGAGAAGCCGTTGC
CGGAGAACCCGACGCTGCTGGAGGCGCTGTCGGCGTGGAACCACACCCACCGCAAGAAGC
TCGTCGACCCGGCGTCCTTCACCGAGATCTTCGGCGAGCTCCACTTCCAGGAGAAGCCGC
CCGTCGTCGACTCCCTCGCTCGCGCCGCCGCCCGCCCCTCGCCGTCGCCGCCGCCTCCGC
CCCCGCCACGCCGCACGGTGTCATGGCTCGACATCACCGACGCCGCCACCGCCGACAACG
ACAACGACAAGAGCAAGGATGACTCCTCGCTCGACGCCCTCCTCAAGCCGCCCAGGCCGG
CGAGCGGCGGCGCCACCGTGAAGCGGAGCGCGAGCTTCTGCCTCAAGAGCTCGACGTCGC
TGCTGCTCTGCACCGAGGGGCTCGGGTCGGAGAGCACCGTGGACGCCGACGACATGGTCA
AGGACGGCGACGGCAGCGGCGCCGTCGTCGACAGCGGGATGGACGTGGACGACGACGCCA
GCGACGTCGCCGCCGCCGTGGCGGGCGACGACGCCTTCGGCGCCGGAGGGAAGGAGAATC
GGCCGCCGCCGCCGCCGCCGTCGTTCCCGCCGCCGATACGGTCGATCGGGCGCGGCGGGA
AGCCGAGTGTGTGCTTCCGGTCGGTGCGCGCGGAGGGGAGGTTCGTGCTGATGGAGGTGG
TCATCCCCGGGAAGGATCTCCTGCGGGCGACTCGCGAGGGCGGCCGCCTCAGGCTGCAGT
TCTCCAACGCCGCCGCCGCCGCCGCCGCCGCCGTCGGCGTCATCGACGACGAGGAGATGC
ATGGACAAGAAGCAGCAGCATGCGTAGGCGGCGACACGTTCGCTTAATTAACTCCTATTA
TAATCTATTATTCTTGTGCTAACTAATTTGGTCAAGAAGCACTAATTAAACATACTTGTG
ATGCATATATATGATTTCATATACATACAATACTTTGTCAGGTCATAGGAACATGTCGCT
CTGTACAATAAGAATGTACGATCTGACCTGAATATCAAAGCAGTGAAAGATCTAGAAAAA
GTTTAAGAGGCT