Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0150400-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:2343622:2344670:-1 gene:Os11g0150400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Stress responsive alpha-beta barrel domain containing protein. (Os11t0150400-01);Similar to pop3 peptide. (Os11t0150400-02)
Sequence

GGCTTTAAACTGTTAAGAGACATTGTGCAAACACATTGGATCTGTAATCTCTTTTTTTTC
AGGGGGAAGGATGTGTTGAACCAGGAGATGCTGACACAGGGCTTCACTCATGTCTTCTCG
CTGACCTTCGCGAGCTCTGAAGATCTGACGACCTACATGAGCCACGAGAGACACCAGGAG
TTCGCCGGCACGTTCATGGCGGCGATCGACAAGGTCGTCGTCGTCGACTTCCCCGTCGTC
GCCTCCAAGCCTGCACCACCGGCGGCACCGGCGGCGGCGGCGTGA

Peptide Sequence

PEP ID

Os11t0150400-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:2343622:2344670:-1 gene:Os11g0150400 transcript:Os11t0150400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Stress responsive alpha-beta barrel domain containing protein. (Os11t0150400-01);Similar to pop3 peptide. (Os11t0150400-02)
Sequence

GFKLLRDIVQTHWICNLFFFRGKDVLNQEMLTQGFTHVFSLTFASSEDLTTYMSHERHQE
FAGTFMAAIDKVVVVDFPVVASKPAPPAAPAAAA

Transcript Sequence

Transcript ID

Os11t0150400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2343622:2344670:-1 gene:Os11g0150400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Stress responsive alpha-beta barrel domain containing protein. (Os11t0150400-01);Similar to pop3 peptide. (Os11t0150400-02)
Sequence

ACACTCTCCTGCAAAGGCACTTCACCTGGAGGTGTAGTGTGAGGAGAGCTTTTTCTTTGC
ACCTTTTGGTTTTTTGGAGCTTCAGCAATGGGGGAGGTCAAGCATCTTTGCCTGGTGAAG
TTCAAGGAAGAGGTCTTGGTGGATGACATCCTGCAAGGCATGACCAAGCTTGTCTCGGAG
ATGGACATGGTGAAATCCTTCGAGTGGTATTGCATCAACCAGTGCTGTTATATTTAGACT
ATAGTTTTGTTTTCTAAATCTGCAGGTTCTGAGGCAGAATACCTCTTAACTAGATAACAT
GCCTAAGATCACTTGTTTTTAGCAGCTAAATGAACTTGTAAGTTTGTTTATCCTTGAGAG
TTCAGACAACTAATTAGATTTTTGACTTGTTTTCTGCTCTAAATCTAGGTTCAGCAGAAA
GTGTGACATATGCCTAAGATCACTAGTTCTTTTAGCAACTAAATGAGCTTGTATTTTCAT
TTGAGGCTTTAAACTGTTAAGAGACATTGTGCAAACACATTGGATCTGTAATCTCTTTTT
TTTCAGGGGGAAGGATGTGTTGAACCAGGAGATGCTGACACAGGGCTTCACTCATGTCTT
CTCGCTGACCTTCGCGAGCTCTGAAGATCTGACGACCTACATGAGCCACGAGAGACACCA
GGAGTTCGCCGGCACGTTCATGGCGGCGATCGACAAGGTCGTCGTCGTCGACTTCCCCGT
CGTCGCCTCCAAGCCTGCACCACCGGCGGCACCGGCGGCGGCGGCGTGATGATGACGACA
TCAACTGTCCATCAAGCATCCATCCGCCATGGCATCAACCATTGCATCATTGTTCCAAGT
ACTTTCAGGTATCCATCCATCCATCTACACACGCAGATAGCTGTGATAGATGTACCTTAG
GTTCCATTATTGCATGTTTCTGCTGCTTCAGTGTTGAGCTGGTGTAGCTTAGCTAAAGCT
GTAATGCAGCTCTATCCCGTGCATTCCGTTCAAAGCTTGTTCGGTTATTCTTGGAATAAA
TTTCGGTGATCTTTTGGTTGCTGTGACTT