Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0149900-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:2321650:2323268:1 gene:Os11g0149900 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAN-like, type 2 domain containing protein. (Os11t0149900-00)
Sequence	ATGAGGTTAGACAAAGGTGATCCGGCGATCGCCGGAGTAGTGGCGGCGCTCTGCGTGGCG TCGGCGGTGATGGTTGCCGTCGTCGACGGCGCCAAGGGAGATGGGCGCGTCACGCAGCTG TCGAATGGCTTCACGGCGAGGCATTCGCCGGACGCGCCGGCGCCGTTCGAGCCGGTGCTG TACGCGGCCAACGGCGCCTTCGCCTTCGGGTTCCTCCGCGTCGGCGCGGCGTCGCTGGAC CTCGCCGTGGTGCACCTCGCCTCGTCATTCCCGGTCTGGCGCGCCACGCCGGCGCGCGTC GGGGACTGGTCGCGCCCGGCGACGCTCACCTTCGACACCGGCCTCGTCCTCGCCGGCGCC GACGACGCCGCCGGCGTGCTGTGGCAGACGCTGAACGCCATCGGCGACACCGTCGTGCTG CTCAACTCGTCCAACCTCGTCGTCCGGCGGTTCGCGGAGACGCGGCCGGCGTGGCAGAGC TTCGACAACCCGTCGGACACGCTCGTCCTGGACCAGAACCTCACCGTGTCGTCGCCGCCG CTCATCTCCGGGAACCGCCGCTTCGCGCTGCGGCTCGCCAAGACGTACATGTCGCTGCAC ATGGAGTTCTACGGCGGGAGGGCGACGCCGATGTACTGGCAGCACACGGCGCTCGAGGCG CAGCCGGAGAACGCCACGCAGCCGCCGGTGTACGGCTGCCTCGACGGCCGGGGCTTCTTC GGGCTGTACCTCCAGGGCAGCGGCGAGAAGGTCGACGTGCTGTCGTTCGACACGTTCGTG CAGAACCTCACCGGCGCGTTCCGGCGGATGACGCTGGAGGACGACGGCAACCTCCGCGCG TACTACTGGACCGACGACGCCAAGGCATGGACCGCCGACTACAAGGCCATCACGGCGCCG TGCGAGCTGCCGACCTCGTGCGGCGCGTACGGCCTGTGCGTCCCCGGCGGCGGCGAGGCC AAGTGCCAGTGCCTCACCAACAGCACCGCGACCTCCCCACCGTGCAGCGCCGAGGAAACC ACCGACCTCTGCGGCGACGGCGACAGCGACGGCGGCCAGGTGTTCGACGAGGTCCGGCTG AAGCGGGTGTCCGTGGCGTACAAGGAGCGGCTGCCGTTCGAGGCGAACGCGACGGCGGAG CAGTGCGAGCAGGCGTGCGCCGGCAACTGCAGCTGCTGGGGCGCGGTGCACAGCGGCGCG AGCGGCTACTGCTACCTCCTCGACTTCCCCGTGGAGACGATGGTGTACGAGGCCGACGAC CGGAAGGTGGGCTACTTCAAGGTCAGGAGGCCGCCGCGGAGCTCGACGCGGCGGGGCATG TCGCCCGGCGCGAAGGCCGTGACGGCGGCGCTGTCGCTGATCCTGGCGAGCCTGGCCGTC GCCGGAGCGTACGTGGGTCACCGGCTGTGGCAGAGACGGCGGCGGCGGCGGCGCGCCGGG GGGATGGAGCAGGAGCTGACGTCGTCGGGGCCGTACAAGGACCTCAAGTCCATGGGAAGC TCAAACAGCTCGTTCAAGTCGTGA

Peptide Sequence

PEP ID	Os11t0149900-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:2321650:2323268:1 gene:Os11g0149900 transcript:Os11t0149900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAN-like, type 2 domain containing protein. (Os11t0149900-00)
Sequence	MRLDKGDPAIAGVVAALCVASAVMVAVVDGAKGDGRVTQLSNGFTARHSPDAPAPFEPVL YAANGAFAFGFLRVGAASLDLAVVHLASSFPVWRATPARVGDWSRPATLTFDTGLVLAGA DDAAGVLWQTLNAIGDTVVLLNSSNLVVRRFAETRPAWQSFDNPSDTLVLDQNLTVSSPP LISGNRRFALRLAKTYMSLHMEFYGGRATPMYWQHTALEAQPENATQPPVYGCLDGRGFF GLYLQGSGEKVDVLSFDTFVQNLTGAFRRMTLEDDGNLRAYYWTDDAKAWTADYKAITAP CELPTSCGAYGLCVPGGGEAKCQCLTNSTATSPPCSAEETTDLCGDGDSDGGQVFDEVRL KRVSVAYKERLPFEANATAEQCEQACAGNCSCWGAVHSGASGYCYLLDFPVETMVYEADD RKVGYFKVRRPPRSSTRRGMSPGAKAVTAALSLILASLAVAGAYVGHRLWQRRRRRRRAG GMEQELTSSGPYKDLKSMGSSNSSFKS

Transcript Sequence

Transcript ID	Os11t0149900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2321650:2323268:1 gene:Os11g0149900 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAN-like, type 2 domain containing protein. (Os11t0149900-00)
Sequence	ATGCTTATATATGACTATGTATGTAGTGTGCGCTACTCTGTCCGAAATCCGAGTCGTTTG AGGTTTCTTTTGTCGTGTCGATGAAATGAGGTTAGACAAAGGTGATCCGGCGATCGCCGG AGTAGTGGCGGCGCTCTGCGTGGCGTCGGCGGTGATGGTTGCCGTCGTCGACGGCGCCAA GGGAGATGGGCGCGTCACGCAGCTGTCGAATGGCTTCACGGCGAGGCATTCGCCGGACGC GCCGGCGCCGTTCGAGCCGGTGCTGTACGCGGCCAACGGCGCCTTCGCCTTCGGGTTCCT CCGCGTCGGCGCGGCGTCGCTGGACCTCGCCGTGGTGCACCTCGCCTCGTCATTCCCGGT CTGGCGCGCCACGCCGGCGCGCGTCGGGGACTGGTCGCGCCCGGCGACGCTCACCTTCGA CACCGGCCTCGTCCTCGCCGGCGCCGACGACGCCGCCGGCGTGCTGTGGCAGACGCTGAA CGCCATCGGCGACACCGTCGTGCTGCTCAACTCGTCCAACCTCGTCGTCCGGCGGTTCGC GGAGACGCGGCCGGCGTGGCAGAGCTTCGACAACCCGTCGGACACGCTCGTCCTGGACCA GAACCTCACCGTGTCGTCGCCGCCGCTCATCTCCGGGAACCGCCGCTTCGCGCTGCGGCT CGCCAAGACGTACATGTCGCTGCACATGGAGTTCTACGGCGGGAGGGCGACGCCGATGTA CTGGCAGCACACGGCGCTCGAGGCGCAGCCGGAGAACGCCACGCAGCCGCCGGTGTACGG CTGCCTCGACGGCCGGGGCTTCTTCGGGCTGTACCTCCAGGGCAGCGGCGAGAAGGTCGA CGTGCTGTCGTTCGACACGTTCGTGCAGAACCTCACCGGCGCGTTCCGGCGGATGACGCT GGAGGACGACGGCAACCTCCGCGCGTACTACTGGACCGACGACGCCAAGGCATGGACCGC CGACTACAAGGCCATCACGGCGCCGTGCGAGCTGCCGACCTCGTGCGGCGCGTACGGCCT GTGCGTCCCCGGCGGCGGCGAGGCCAAGTGCCAGTGCCTCACCAACAGCACCGCGACCTC CCCACCGTGCAGCGCCGAGGAAACCACCGACCTCTGCGGCGACGGCGACAGCGACGGCGG CCAGGTGTTCGACGAGGTCCGGCTGAAGCGGGTGTCCGTGGCGTACAAGGAGCGGCTGCC GTTCGAGGCGAACGCGACGGCGGAGCAGTGCGAGCAGGCGTGCGCCGGCAACTGCAGCTG CTGGGGCGCGGTGCACAGCGGCGCGAGCGGCTACTGCTACCTCCTCGACTTCCCCGTGGA GACGATGGTGTACGAGGCCGACGACCGGAAGGTGGGCTACTTCAAGGTCAGGAGGCCGCC GCGGAGCTCGACGCGGCGGGGCATGTCGCCCGGCGCGAAGGCCGTGACGGCGGCGCTGTC GCTGATCCTGGCGAGCCTGGCCGTCGCCGGAGCGTACGTGGGTCACCGGCTGTGGCAGAG ACGGCGGCGGCGGCGGCGCGCCGGGGGGATGGAGCAGGAGCTGACGTCGTCGGGGCCGTA CAAGGACCTCAAGTCCATGGGAAGCTCAAACAGCTCGTTCAAGTCGTGATCCATCCATG