Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0148700-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:2247706:2252692:-1 gene:Os11g0148700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0148700-01)
Sequence	TCTGATGAAGGTAAGGCTCCAACTTCCCATCTGACAACAAACCAAAGGAAGAAACTGGCT GCTGACTGTGCTCTACAAGTGAAAGCATTTTCCTCAGCAGCCTTACAATTTGTTTGGCCA AGTACTGAAAAGAAGGTTATGGAAGTCCCAAGAGATAGATGTGGTTGGTGCCTTGCCTGT CAAAGTTCAGCAGGTGGAACTAAAAAAGCTTGTTTTCTTAACATGGCCACTGCAAATGCT TCTAAAGGATCTGCTCGAATTCTTAGTGGCATGCGTTTAATCAAGAATTCTGATAGCCAT TTCCCCAGCATTGTTACTTATTTAAGCCACATGGAGGAAAGTTTGCGTGGCCTTTTAGTT GGTTCACTACAAGATGTGCAGCGGAGACAACAGTGGTATAATCAACTAAAAGATGCTTCC AACTGTGGAAATATAATACCCCTCTTGCTTGAATTGGAAAGTAATATTCGTGGTGTAGCA TTTTCTACTAGCTGGCTGAAGCTAATAGATGACTGGCCTGTGGAATCTCCTAGTGCATCT GCTGGTGCATCCCGTCCTGCAGCATACCAAAAACGTGGAACTGGTGGAAGGCGGGGCAGA AAACGTTCAATGGCATCTGAATCTGCTCCTGTTACTGATGATGACAACAGCTGGAAAGAA GTGAATTGGTGGAGTGGAGGAAATGTTTCAAAGCGTATCTTACAGAGGGGGGCTCTACCA ATTTTGACCATTAGAAAAGCTGCTCGTCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCT TATCATGAAGGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTT GGATTAAGCCAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATA AGATGGAAGGAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAAGTGTAGATTCT GACTATTCTGTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATA AGATATGCACTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATT TTGGAAGCAGAAGATAATCAGGATGGGGATGGGAAATTTTGGTTTTCTGAAAACCATATC CCACTATACTTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCA GGAATGTTAGATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAATCATCAATT GGAGATGTTTTCTTCTATCTGCTTCACAAGGGTGATGTATATCCTTGCACCTCATGCAAG AAGGATGTTTCCTTCAGGGATATCATAAAATGCAGCTCTTGTCAAGGTAATTGTCATAAA GAGTGCACATTAAGGTCTGTTGGTAGCAAAGAGGGCAATGCTGCTTCCAGTTTAACATGC AAGTTGTGCCTTCAGAAGCGTAGTCTTATGCTTACAAATTACAATACAAACGCAAGTTTC ATCCTACCTCAACAGAAGAGTAATGTCCATCACGCAGTGGCAGCTCCCAAAATAATCTTT AAGGTTGGTTCTTCCCATTCCGCTGAACCAGCCACAAAGGTTGAAGCTCCGCCAATCGTG AAGGTAGAAGCCCAGCCAGTGGTCAAGAAGGAAACCTGGCCAGTTGTGAAGATGGAAACC CAGCCAACTGCAAATGTAGAAGCACAGCCAACTGCAAAAGTGGAAGCCTTTCCAATTTCG AATTTGGCAACTCAGAATAATGCAGGGGCGCAAGTCCAGCCTAAGACAAAATCTAAAAAA CCCAAGCCAGAAAAACCGAGAAAATCCAAGAAGACTGAAGAGATCAAATACTTTGGTCTC GTGTGGAAGAAAAGCACTAATGACAAAAATAATAATGAAAATTCTGGAGAAGTGTTCAGG GCGAATGATGTTATCCTAAAAGGCAAGGATGGTGTAGGTTCATCAATAAAACCTACTTGC TGTCTTTGTAATAAGCCTTATTGCCCAGATTTCCTGTATGTCCGCTGCGAGAGGTGCAAA AAGTGGTTTCATGGCGATGCCTTGCAACTTGAGGAAGAAAAGATATTTGAATTGGTTTCA TACCGATGTTGCAGATGCCGAAGGCGAGCCATACCAAAATGTCCTCATTCAGATGATTAT AAGAAGCCTGAACCAGAATACAGTGAGCAAACAGTCGCTACGTCATCACAGTCAACTATG CTTTCTAGTGAGGAGAATTTTGCTGTAGCAGATCAAGATCCACTGCTTGCTTCATATGGC AGAGTTGAACCGTTTGGAGCACAAACAATGGATGCTGATTTATCGATGAACATGATGAGC TTTAACCCAGGAAATCAGAAACTATCAGTAAGAAGGGGACAAAACAAAAATTGTGAATAT GTTGACCAATCCAGTATACATGTGGATGACTATTATATCCAGAATCAACCTCAAGGGAAT GCAAACATCAATTTCAGTCACTCGAATGAATTCTCTTTGTCAGAGGCTGATGGTGTGGAT GCTTCAGAGCTGTTGGGATGGGATTTTTCTCAAGGAAATACCAGTGCTGCCCCTTCTGAT TTCGCAGCTAATTGCCCGTGGAATGACATCAGCTGTGGCAGCGTTGCTGGTGATGAATAT GAACCACAGACTTATTTCTCATTCACCGAACTACTTGAAGCTGATGATACACAGTTCGAT AATACATTTGGGATGTCTAATAGTGTGCAAGATGATGGTGACCAACAAGGAATTGGTTTT GATGAAATGGCTTTCATGATGGAAGATGGGGCCTCAAACATGCCTTTCCCAGCTATTGAC TCCGCCTCTGACGAGGTAGCATGTGACAGGTGCAAGAATCCTCAGCCGCCACCTGATCTC AAATGCGCAGTATGTGGACTGCAGATGCACCGTCATTGCTCGCCTTGGGAGGATGGTGAA CAGCCATCAGATAGTGCCGATTGGAGTTGTGGTGCCTGCCGGGAGTGGCGATGA

Peptide Sequence

PEP ID	Os11t0148700-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:2247706:2252692:-1 gene:Os11g0148700 transcript:Os11t0148700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0148700-01)
Sequence	SDEGKAPTSHLTTNQRKKLAADCALQVKAFSSAALQFVWPSTEKKVMEVPRDRCGWCLAC QSSAGGTKKACFLNMATANASKGSARILSGMRLIKNSDSHFPSIVTYLSHMEESLRGLLV GSLQDVQRRQQWYNQLKDASNCGNIIPLLLELESNIRGVAFSTSWLKLIDDWPVESPSAS AGASRPAAYQKRGTGGRRGRKRSMASESAPVTDDDNSWKEVNWWSGGNVSKRILQRGALP ILTIRKAARQGGKKRMFSVSYHEGSNFPRRTRQLAWRACVGLSQSSSQLALQVRYLDSHI RWKEFIPPDQIPSEGKSVDSDYSVLRNAVVCDKKIVDNKIRYALKFPNQKHLPVRVTKNI LEAEDNQDGDGKFWFSENHIPLYLLREFEQKAGVSSLPTPGMLDSNCFANFYQRRVKSSI GDVFFYLLHKGDVYPCTSCKKDVSFRDIIKCSSCQGNCHKECTLRSVGSKEGNAASSLTC KLCLQKRSLMLTNYNTNASFILPQQKSNVHHAVAAPKIIFKVGSSHSAEPATKVEAPPIV KVEAQPVVKKETWPVVKMETQPTANVEAQPTAKVEAFPISNLATQNNAGAQVQPKTKSKK PKPEKPRKSKKTEEIKYFGLVWKKSTNDKNNNENSGEVFRANDVILKGKDGVGSSIKPTC CLCNKPYCPDFLYVRCERCKKWFHGDALQLEEEKIFELVSYRCCRCRRRAIPKCPHSDDY KKPEPEYSEQTVATSSQSTMLSSEENFAVADQDPLLASYGRVEPFGAQTMDADLSMNMMS FNPGNQKLSVRRGQNKNCEYVDQSSIHVDDYYIQNQPQGNANINFSHSNEFSLSEADGVD ASELLGWDFSQGNTSAAPSDFAANCPWNDISCGSVAGDEYEPQTYFSFTELLEADDTQFD NTFGMSNSVQDDGDQQGIGFDEMAFMMEDGASNMPFPAIDSASDEVACDRCKNPQPPPDL KCAVCGLQMHRHCSPWEDGEQPSDSADWSCGACREWR

Transcript Sequence

Transcript ID	Os11t0148700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2247706:2252692:-1 gene:Os11g0148700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os11t0148700-01)
Sequence	TCTGATGAAGGTAAGGCTCCAACTTCCCATCTGACAACAAACCAAAGGAAGAAACTGGCT GCTGACTGTGCTCTACAAGTGAAAGCATTTTCCTCAGCAGCCTTACAATTTGTTTGGCCA AGTACTGAAAAGAAGGTTATGGAAGTCCCAAGAGATAGATGTGGTTGGTGCCTTGCCTGT CAAAGTTCAGCAGGTGGAACTAAAAAAGCTTGTTTTCTTAACATGGCCACTGCAAATGCT TCTAAAGGATCTGCTCGAATTCTTAGTGGCATGCGTTTAATCAAGAATTCTGATAGCCAT TTCCCCAGCATTGTTACTTATTTAAGCCACATGGAGGAAAGTTTGCGTGGCCTTTTAGTT GGTTCACTACAAGATGTGCAGCGGAGACAACAGTGGTATAATCAACTAAAAGATGCTTCC AACTGTGGAAATATAATACCCCTCTTGCTTGAATTGGAAAGTAATATTCGTGGTGTAGCA TTTTCTACTAGCTGGCTGAAGCTAATAGATGACTGGCCTGTGGAATCTCCTAGTGCATCT GCTGGTGCATCCCGTCCTGCAGCATACCAAAAACGTGGAACTGGTGGAAGGCGGGGCAGA AAACGTTCAATGGCATCTGAATCTGCTCCTGTTACTGATGATGACAACAGCTGGAAAGAA GTGAATTGGTGGAGTGGAGGAAATGTTTCAAAGCGTATCTTACAGAGGGGGGCTCTACCA ATTTTGACCATTAGAAAAGCTGCTCGTCAAGGTGGAAAAAAAAGGATGTTCAGTGTGTCT TATCATGAAGGCTCCAATTTTCCAAGGCGGACTCGGCAACTTGCTTGGAGGGCATGTGTT GGATTAAGCCAGAGTTCATCTCAACTTGCTCTCCAGGTTAGATATCTTGATTCCCACATA AGATGGAAGGAGTTCATCCCTCCAGATCAAATTCCTTCAGAAGGGAAAAGTGTAGATTCT GACTATTCTGTTCTCAGAAACGCAGTTGTTTGTGATAAAAAAATAGTTGACAATAAGATA AGATATGCACTTAAGTTTCCCAACCAGAAGCATCTTCCTGTCCGTGTAACAAAGAATATT TTGGAAGCAGAAGATAATCAGGATGGGGATGGGAAATTTTGGTTTTCTGAAAACCATATC CCACTATACTTGCTACGAGAATTTGAGCAGAAAGCTGGGGTTAGCTCCTTGCCTACTCCA GGAATGTTAGATTCTAACTGTTTTGCCAATTTCTACCAAAGGCGAGTAAAATCATCAATT GGAGATGTTTTCTTCTATCTGCTTCACAAGGGTGATGTATATCCTTGCACCTCATGCAAG AAGGATGTTTCCTTCAGGGATATCATAAAATGCAGCTCTTGTCAAGGTAATTGTCATAAA GAGTGCACATTAAGGTCTGTTGGTAGCAAAGAGGGCAATGCTGCTTCCAGTTTAACATGC AAGTTGTGCCTTCAGAAGCGTAGTCTTATGCTTACAAATTACAATACAAACGCAAGTTTC ATCCTACCTCAACAGAAGAGTAATGTCCATCACGCAGTGGCAGCTCCCAAAATAATCTTT AAGGTTGGTTCTTCCCATTCCGCTGAACCAGCCACAAAGGTTGAAGCTCCGCCAATCGTG AAGGTAGAAGCCCAGCCAGTGGTCAAGAAGGAAACCTGGCCAGTTGTGAAGATGGAAACC CAGCCAACTGCAAATGTAGAAGCACAGCCAACTGCAAAAGTGGAAGCCTTTCCAATTTCG AATTTGGCAACTCAGAATAATGCAGGGGCGCAAGTCCAGCCTAAGACAAAATCTAAAAAA CCCAAGCCAGAAAAACCGAGAAAATCCAAGAAGACTGAAGAGATCAAATACTTTGGTCTC GTGTGGAAGAAAAGCACTAATGACAAAAATAATAATGAAAATTCTGGAGAAGTGTTCAGG GCGAATGATGTTATCCTAAAAGGCAAGGATGGTGTAGGTTCATCAATAAAACCTACTTGC TGTCTTTGTAATAAGCCTTATTGCCCAGATTTCCTGTATGTCCGCTGCGAGAGGTGCAAA AAGTGGTTTCATGGCGATGCCTTGCAACTTGAGGAAGAAAAGATATTTGAATTGGTTTCA TACCGATGTTGCAGATGCCGAAGGCGAGCCATACCAAAATGTCCTCATTCAGATGATTAT AAGAAGCCTGAACCAGAATACAGTGAGCAAACAGTCGCTACGTCATCACAGTCAACTATG CTTTCTAGTGAGGAGAATTTTGCTGTAGCAGATCAAGATCCACTGCTTGCTTCATATGGC AGAGTTGAACCGTTTGGAGCACAAACAATGGATGCTGATTTATCGATGAACATGATGAGC TTTAACCCAGGAAATCAGAAACTATCAGTAAGAAGGGGACAAAACAAAAATTGTGAATAT GTTGACCAATCCAGTATACATGTGGATGACTATTATATCCAGAATCAACCTCAAGGGAAT GCAAACATCAATTTCAGTCACTCGAATGAATTCTCTTTGTCAGAGGCTGATGGTGTGGAT GCTTCAGAGCTGTTGGGATGGGATTTTTCTCAAGGAAATACCAGTGCTGCCCCTTCTGAT TTCGCAGCTAATTGCCCGTGGAATGACATCAGCTGTGGCAGCGTTGCTGGTGATGAATAT GAACCACAGACTTATTTCTCATTCACCGAACTACTTGAAGCTGATGATACACAGTTCGAT AATACATTTGGGATGTCTAATAGTGTGCAAGATGATGGTGACCAACAAGGAATTGGTTTT GATGAAATGGCTTTCATGATGGAAGATGGGGCCTCAAACATGCCTTTCCCAGCTATTGAC TCCGCCTCTGACGAGGTAGCATGTGACAGGTGCAAGAATCCTCAGCCGCCACCTGATCTC AAATGCGCAGTATGTGGACTGCAGATGCACCGTCATTGCTCGCCTTGGGAGGATGGTGAA CAGCCATCAGATAGTGCCGATTGGAGTTGTGGTGCCTGCCGGGAGTGGCGATGATGAGCT TCAAACTTTCATTGCACTTGTTACCTGAGAGCTGCATAGAGCAGCTGTCTAATTACAGTC GAAGAAGAAATCTCATGAAGCACACCAAGGAGGAGCGAGGGAAAATTTCCCTTCTAGCTA TTTGGCATTGTCAGTGCCACTGACCGTTTGGGAGTTGTGGCGTTGATTACTGGACACACC TTAGCAATATGGTTTGACAACCAAGGTTTTCGGCGAACTGTACATATATTAATGAATGGT TGATCGAAAAAGCCGTTTTCCATTCATCTAGGCGGTTTTCTTTTTAAGGGGAGGATTATA GGATTAGATTGCTCTTAGTTACGTGTTATATAGGAGCTCTGGACTTTGGAAGCCATGTTC CTGACAATGTGTTGTCTTGGATTCTTTTGCCCCTTTTTTTCCCTCAGAAAAAGAATAGAA GTGCCTCTTTCTCCGAGTGGATGCGATATCCTTGATATATATAGCCTCGGCTTTTTCCTC TGATT