Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0148600-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2245125:2247217:-1 gene:Os11g0148600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0148600-01)
Sequence

ATGGCGCTCTCGACCTCCCGGCCTCACCACCTCCTGCGCCCTCTCCTCCGCGGCTTCCAC
GCCACTTCTCAGGCCATGGCGAGGCCTGAGCCCCACGAGTTCTCCAAGCCGAGCGACTAC
CTCGGGAGCTGGGAGCCCGCGGGCGACCCACGGGAGGCGTGGGCGCGGCTGGAGCGGCTT
CGCAAGGGCTACGCGCGCGACGTGCGGCAGCTGCGGAGGCAGTACTCGTACGAGATGCAG
CTGCTGGAGGCCGAGCGGCAGCGCAAGGCGGAGGCCCGCGCCGAGGCCGCCCGCCTCGCC
AACGAGGAGCGCAAGGCCACCAAGGCCGCCGCCGCGCAGACGCGCGCCGCCGAGCGCCGC
GCCTTCGAGAAGGACTTCCGCCAAGCCCTTATGAAAGAAAGAGCTGAGAAGCTGGAGAGC
TGGAGGGAGAAGGAGAAGCTTAAAGTACAGAAGAAGGCGGATCACAGGGAGCTCTTGCGC
AAGAAAAGCTCTATGTGGGTTGCTGAGGATAAACTGGAAACAACAATTCTTGACGCTATC
AAAAATACCACAGCTCTCTGA

Peptide Sequence

PEP ID

Os11t0148600-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2245125:2247217:-1 gene:Os11g0148600 transcript:Os11t0148600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0148600-01)
Sequence

MALSTSRPHHLLRPLLRGFHATSQAMARPEPHEFSKPSDYLGSWEPAGDPREAWARLERL
RKGYARDVRQLRRQYSYEMQLLEAERQRKAEARAEAARLANEERKATKAAAAQTRAAERR
AFEKDFRQALMKERAEKLESWREKEKLKVQKKADHRELLRKKSSMWVAEDKLETTILDAI
KNTTAL

Transcript Sequence

Transcript ID

Os11t0148600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2245125:2247217:-1 gene:Os11g0148600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0148600-01)
Sequence

GCAGGAGGGTTTTCCCTTTTCCACCTTGTCGCCGGCAAAGCCACAGCCACGGCGATCTGC
TCCCCCTCACGGCGGCGATGGCGCTCTCGACCTCCCGGCCTCACCACCTCCTGCGCCCTC
TCCTCCGCGGCTTCCACGCCACTTCTCAGGCCATGGCGAGGCCTGAGCCCCACGAGTTCT
CCAAGCCGAGCGACTACCTCGGGAGCTGGGAGCCCGCGGGCGACCCACGGGAGGCGTGGG
CGCGGCTGGAGCGGCTTCGCAAGGGCTACGCGCGCGACGTGCGGCAGCTGCGGAGGCAGT
ACTCGTACGAGATGCAGCTGCTGGAGGCCGAGCGGCAGCGCAAGGCGGAGGCCCGCGCCG
AGGCCGCCCGCCTCGCCAACGAGGAGCGCAAGGCCACCAAGGCCGCCGCCGCGCAGACGC
GCGCCGCCGAGCGCCGCGCCTTCGAGAAGGACTTCCGCCAAGCCCTTATGAAAGAAAGAG
CTGAGAAGCTGGAGAGCTGGAGGGAGAAGGAGAAGCTTAAAGTACAGAAGAAGGCGGATC
ACAGGGAGCTCTTGCGCAAGAAAAGCTCTATGTGGGTTGCTGAGGATAAACTGGAAACAA
CAATTCTTGACGCTATCAAAAATACCACAGCTCTCTGAGGATACAAGATGGTGTATTCTG
AAAGCATGACGGAGGATGGACTGAAGGAAGCTTATTTGTGATTCCCTTCTGGAACTAATC
ACAACTGCCTAAGCAATAACAACCATATTTGAAAATTCTGCTGCAACACTGTATGTTATA
TTGTTAGACTTGAACGCCAAGCTGAAATTGTATTTTGGCATTGCCTTTTTTCTGAGAGAG
ACCTCTCTCCTCAAATTTCTGTTAAAAATTTGTTGCACGATTAAAATTATCATGGCCAAA
TTTTGATTTTCCTGC