Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0148500-02
CDS Infomation	cds chromosome:IRGSP-1.0:11:2239301:2243356:-1 gene:Os11g0148500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyruvate kinase 1 description:Cytosolic pyruvate kinase, Plant morphological development (Os11t0148500-02)
Sequence	ATGCATTCGACGAATCTGCTGCTGGAGGAGCCCATCAGGATGGCATCCATCCTGGAGCCA TCCAAGCCGAGCTTTTTCCCGGCGATGACCAAGATCGTGGGGACGCTGGGTCCCAAGTCG CGCGCCGTCGACACCATCTCCTCCTGCCTCAAGGCCGGCATGTCGGTTGCCAGGTTCGAT TTCTCGTGGGGAGACGCTGAGTACCACCAGGAAACCCTCGAAAACCTCAAGCTCGCCATC AAGTCCACCAAGAAGCTCTGTGCTGTCATGCTCGACACTGTCGGCCCGGAGTTGCAGGTG GTGAACAAGAGTGAGGCTGCAATCTCCCTTGAAGCGAATGGCACTGTTGTTCTCACCCCT GACCAGGGGCAGGAGGCCTCCTCCGAATTGCTGCCCATCAACTTCTCCGGGCTTGCTAAG GCTCTGAAACCAGGTGCTACAATTTTTGTGGGGCAATACTTGTTCACTGGCAGTGAGACT ACTTCAGTTTGGTTAGAGGTTTCTGAAGTTAAAGGAGATGATGTGGTTTGTGTGATAAAA AATTCGGCTACTCTGGCTGGTTCACTGTTCACCCTGCATTGTTCTCAGATTCATATCGAC TTACCTACACTGTCTGATGAGGACAAGGAGGTTATCAGAAGATGGGGAGCTCCAAACAAG ATTGACTTCCTCTCTCTGTCTTATACAAGACACGCGGAAGATGTGCGACAGGCACGTGAG TTCCTCTCAAAGTTAGGCGACCTTAGCCAAACTCAGATTTTTGCCAAAATTGAGAATGTT GAGGGTTTGAATCATTTTGATGAAATCCTGCAAGAGGCGGATGGTATCATTCTGTCAAGA GGAAACCTTGGAATTGATCTTCCACCTGAAAAGGTGTTTTTGTTTCAAAAGTCTGCTCTG CACAAGTGCAACATGGCTGGAAAGCCTGCTGTTGTTACTCGTGTTGTGGACAGTATGACT GACAACCTCAGGCCTACTCGTGCGGAGGCTACTGATGTGGCAAATGCTGTACTTGACGGG AGTGATGCCATTCTCCTTGGTGCTGAGACTCTCCGTGGTCTGTACCCAGTTGAGACTATC TCAATTGTGGGCAAAATTTGCGCTGAGGCAGAGAAGGTATTCAACCAAGATTTATACTTC AAGCGGACTGTGAAATATGTTGGGGAGCCCATGACCCACTTGGAGTCTATCGCTTCTTCT GCGGTGCGAGCTGCTATCAAAGTGAAGGCTTCTGTCATTATTTGCTTCACATCATCTGGA CGCGCTGCAAGACTAATTGCCAAGTACAGGCCCACCATGCCTGTTCTATCTGTTGTCATT CCTCGTCTGAAAACAAACCAACTGAGGTGGAGTTTCACTGGCGCATTTGAAGCAAGACAA TCACTCATAGTTAGAGGTCTCTTTCCGATGCTTGCTGATCCTCGCCATCCAGCTGAATCG ACCAGCGCTACCAATGAGTCAGTTTTGAAGGTTGCTCTTGACCATGGCAAAGCTTCCGGT GTGATCAAGTCGCATGATCGCGTTGTTGTCTGCCAGAAAGTGGGTGATTCCTCGGTTGTG AAGATCATTGAGCTGGACGATTAG

Peptide Sequence

PEP ID	Os11t0148500-02
PEP Infomation	pep chromosome:IRGSP-1.0:11:2239301:2243356:-1 gene:Os11g0148500 transcript:Os11t0148500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyruvate kinase 1 description:Cytosolic pyruvate kinase, Plant morphological development (Os11t0148500-02)
Sequence	MHSTNLLLEEPIRMASILEPSKPSFFPAMTKIVGTLGPKSRAVDTISSCLKAGMSVARFD FSWGDAEYHQETLENLKLAIKSTKKLCAVMLDTVGPELQVVNKSEAAISLEANGTVVLTP DQGQEASSELLPINFSGLAKALKPGATIFVGQYLFTGSETTSVWLEVSEVKGDDVVCVIK NSATLAGSLFTLHCSQIHIDLPTLSDEDKEVIRRWGAPNKIDFLSLSYTRHAEDVRQARE FLSKLGDLSQTQIFAKIENVEGLNHFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSAL HKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI SIVGKICAEAEKVFNQDLYFKRTVKYVGEPMTHLESIASSAVRAAIKVKASVIICFTSSG RAARLIAKYRPTMPVLSVVIPRLKTNQLRWSFTGAFEARQSLIVRGLFPMLADPRHPAES TSATNESVLKVALDHGKASGVIKSHDRVVVCQKVGDSSVVKIIELDD

Transcript Sequence

Transcript ID	Os11t0148500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2239301:2243356:-1 gene:Os11g0148500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pyruvate kinase 1 description:Cytosolic pyruvate kinase, Plant morphological development (Os11t0148500-02)
Sequence	GCTGCCTCGATTGATTGATTGATTCCTTGGAGAAGAAGAAGGAGGAGGAGGAGATCGAGC AGCCGCTGACGCTCGTCGTCTACCTCCCGATCTGATCCGAGGAGCGAAGCGAACAGGGGC AAGATGCATTCGACGAATCTGCTGCTGGAGGAGCCCATCAGGATGGCATCCATCCTGGAG CCATCCAAGCCGAGCTTTTTCCCGGCGATGACCAAGATCGTGGGGACGCTGGGTCCCAAG TCGCGCGCCGTCGACACCATCTCCTCCTGCCTCAAGGCCGGCATGTCGGTTGCCAGGTTC GATTTCTCGTGGGGAGACGCTGAGTACCACCAGGAAACCCTCGAAAACCTCAAGCTCGCC ATCAAGTCCACCAAGAAGCTCTGTGCTGTCATGCTCGACACTGTCGGCCCGGAGTTGCAG GTGGTGAACAAGAGTGAGGCTGCAATCTCCCTTGAAGCGAATGGCACTGTTGTTCTCACC CCTGACCAGGGGCAGGAGGCCTCCTCCGAATTGCTGCCCATCAACTTCTCCGGGCTTGCT AAGGCTCTGAAACCAGGTGCTACAATTTTTGTGGGGCAATACTTGTTCACTGGCAGTGAG ACTACTTCAGTTTGGTTAGAGGTTTCTGAAGTTAAAGGAGATGATGTGGTTTGTGTGATA AAAAATTCGGCTACTCTGGCTGGTTCACTGTTCACCCTGCATTGTTCTCAGATTCATATC GACTTACCTACACTGTCTGATGAGGACAAGGAGGTTATCAGAAGATGGGGAGCTCCAAAC AAGATTGACTTCCTCTCTCTGTCTTATACAAGACACGCGGAAGATGTGCGACAGGCACGT GAGTTCCTCTCAAAGTTAGGCGACCTTAGCCAAACTCAGATTTTTGCCAAAATTGAGAAT GTTGAGGGTTTGAATCATTTTGATGAAATCCTGCAAGAGGCGGATGGTATCATTCTGTCA AGAGGAAACCTTGGAATTGATCTTCCACCTGAAAAGGTGTTTTTGTTTCAAAAGTCTGCT CTGCACAAGTGCAACATGGCTGGAAAGCCTGCTGTTGTTACTCGTGTTGTGGACAGTATG ACTGACAACCTCAGGCCTACTCGTGCGGAGGCTACTGATGTGGCAAATGCTGTACTTGAC GGGAGTGATGCCATTCTCCTTGGTGCTGAGACTCTCCGTGGTCTGTACCCAGTTGAGACT ATCTCAATTGTGGGCAAAATTTGCGCTGAGGCAGAGAAGGTATTCAACCAAGATTTATAC TTCAAGCGGACTGTGAAATATGTTGGGGAGCCCATGACCCACTTGGAGTCTATCGCTTCT TCTGCGGTGCGAGCTGCTATCAAAGTGAAGGCTTCTGTCATTATTTGCTTCACATCATCT GGACGCGCTGCAAGACTAATTGCCAAGTACAGGCCCACCATGCCTGTTCTATCTGTTGTC ATTCCTCGTCTGAAAACAAACCAACTGAGGTGGAGTTTCACTGGCGCATTTGAAGCAAGA CAATCACTCATAGTTAGAGGTCTCTTTCCGATGCTTGCTGATCCTCGCCATCCAGCTGAA TCGACCAGCGCTACCAATGAGTCAGTTTTGAAGGTTGCTCTTGACCATGGCAAAGCTTCC GGTGTGATCAAGTCGCATGATCGCGTTGTTGTCTGCCAGAAAGTGGGTGATTCCTCGGTT GTGAAGATCATTGAGCTGGACGATTAGACGACCAGCTTGTGCTTGTTGATGATACTACGG CAAGTCATGGTTTGCCAGATTTTGACTAGGCCAAAAACGATGCTTCTTGGCTATATGTAT AATTCCTATATAGGCTTTCCAATGAGCAGTTTTTCCTATGGTGTAATCATAGGATTTGCC TTACTATTTGAAACAACTACGTTTTAGTTATGTAAGTTATCAGATTTCAATGCATCATAT CACTTCGATGGGCAAATGGAATAATGAAATCGGTACTGTACCCTTTGGTCT