Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0147100-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2145222:2148114:1 gene:Os11g0147100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0147100-01)
Sequence

ATGGCGAGCGCGGATCTGCTGCGGAGGGAGGAGGAGTTCTACGCCTCCTTGTTCGACTCC
GCCAAAGGTGGAGATGCCGTCAAGTCGCGTGGGCAGATGATTGAGAGGAAGATTGAAGTT
CTTGAGGACATGGCCGCCAAGGTTAGTAATCGGAGATCTCGTAGGTGGTTGAATGACCGG
TTGCTCATTGAACTTGTCCCCCGTCTTCATGTGGAAGAAATCAAAGGCCTTTTTGCTCCT
CCACCATGGGGTGAGGAACTGCCCGTTTCTGCATTCTGCAGGACAAGTGTCGGTGAATGG
GATGCCTTCAGGAGTATTGACATGGATGTTGAGGCACGATTGGTGCAACAGATGAAACAG
TCTTCTACAAAACAGAAGAACCATTTGGACAGAGATGAATTGGTTGCTCTCAATTCTTGG
CATCATATAGATCGTCAAACAAGAGAAGCCATAAAGAGAAATTTCCTCCCAGATCTTCTT
GAAATATACGAAGAACGAGTTAGGACCTTCATCGAAGACACTAGTGGTAAAGATATGCTT
GTACTGAATGTCCAGGACCCATTTCAGAGATTGCTTTTGCACGGTGTATGCGAGTTCTAT
AATGTATCATCTACAACCACGACTACCGTAAGAGATGGAAAGCTGTGTAAAACGACAGCA
ATCAAGAAGAGATCAGGCACAGGTGCTCCCTCCAGAATCACATTGGTTAGCTTCCTAAGG
ATGAAGAAAAAGTCCCATTAA

Peptide Sequence

PEP ID

Os11t0147100-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2145222:2148114:1 gene:Os11g0147100 transcript:Os11t0147100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0147100-01)
Sequence

MASADLLRREEEFYASLFDSAKGGDAVKSRGQMIERKIEVLEDMAAKVSNRRSRRWLNDR
LLIELVPRLHVEEIKGLFAPPPWGEELPVSAFCRTSVGEWDAFRSIDMDVEARLVQQMKQ
SSTKQKNHLDRDELVALNSWHHIDRQTREAIKRNFLPDLLEIYEERVRTFIEDTSGKDML
VLNVQDPFQRLLLHGVCEFYNVSSTTTTTVRDGKLCKTTAIKKRSGTGAPSRITLVSFLR
MKKKSH

Transcript Sequence

Transcript ID

Os11t0147100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2145222:2148114:1 gene:Os11g0147100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0147100-01)
Sequence

CCGACACCGTTTGCGATTCCCCAATTTTAGCCCTAGAACACGCACATCCCGGAATCGGAG
CAAGAGGCCTGCCTTGCCGGCGGAGGAGAGGAATTGATCGCGAGAAGCACGGGGAAGTCG
AGCATGGCGAGCGCGGATCTGCTGCGGAGGGAGGAGGAGTTCTACGCCTCCTTGTTCGAC
TCCGCCAAAGGTGGAGATGCCGTCAAGTCGCGTGGGCAGATGATTGAGAGGAAGATTGAA
GTTCTTGAGGACATGGCCGCCAAGGTTAGTAATCGGAGATCTCGTAGGTGGTTGAATGAC
CGGTTGCTCATTGAACTTGTCCCCCGTCTTCATGTGGAAGAAATCAAAGGCCTTTTTGCT
CCTCCACCATGGGGTGAGGAACTGCCCGTTTCTGCATTCTGCAGGACAAGTGTCGGTGAA
TGGGATGCCTTCAGGAGTATTGACATGGATGTTGAGGCACGATTGGTGCAACAGATGAAA
CAGTCTTCTACAAAACAGAAGAACCATTTGGACAGAGATGAATTGGTTGCTCTCAATTCT
TGGCATCATATAGATCGTCAAACAAGAGAAGCCATAAAGAGAAATTTCCTCCCAGATCTT
CTTGAAATATACGAAGAACGAGTTAGGACCTTCATCGAAGACACTAGTGGTAAAGATATG
CTTGTACTGAATGTCCAGGACCCATTTCAGAGATTGCTTTTGCACGGTGTATGCGAGTTC
TATAATGTATCATCTACAACCACGACTACCGTAAGAGATGGAAAGCTGTGTAAAACGACA
GCAATCAAGAAGAGATCAGGCACAGGTGCTCCCTCCAGAATCACATTGGTTAGCTTCCTA
AGGATGAAGAAAAAGTCCCATTAACATGTGCCGTGTATTGGCAAAACATGCCGATTTAGG
TTCTGTTTAGGATGTACACATGTAAATTATCGATATTATCATCTTAACATATTTGAATGC
AAGATTGGTCACTGCCTCACTGATCGTGAGTCGTGACCTCC