Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0144900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2056281:2059194:1 gene:Os11g0144900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0144900-01)
Sequence

ATGGCCGCTGACGCTTACGCTGACGCCGCGCCGCCGCGGCGAGCTCCGGCGCCGGCGACT
TCGACAGTGGCGAAGGAGGCGGAGTTCCTCTGGGAGCTTCGCAAGTATGTTCTGCTGCTG
GCCACGCTCGCCGCCACCGTCACCTACACGGCGGGGCTGGACCCGCCGGGCGGGTTCTGG
ACGGACAACGTGGGCGAGCTCCTCGCCGGCGACCCGGTGCTCCAGAAGACCTACCCTCGC
CGCTACAAGGCCTTCTTCTACTGCAACGCCACCGCGTTCGTCGCCTCCCTCGTCATCGTC
AACCTCCTGCTCGTCCGCTTCCTGTGCCGCCGCCGGTGGTGGCTGCGCGCGCTCCAGGCC
GCGATGACACTCGACATGTTCGGCCTCATGGGGGCCTACGCCGCCGGCAGCAGCAGGGAG
GCGGCCATGTCCGCCTACATCCTCGTTCTCGTCATCTTGGTTTGCTCCTACGTCTCCGCC
CATGTCCTGCTCTACGGGCTGACGGCGCAGGTGAGCGCGCCGGACGCGCCGGAGCGGGTG
GAGCGCGCGCGCAAGTACCTGCTCATCTTCGCGACTCTGGCGGCGACCGTGGCGTACCAA
GCCGGGCTGAGCACGCCGGGCGGGTTCTGGCTAGGCAGCCTGGACAACCAGCACCTCGCC
GGCGACCCCATGCTCCGCGGCAACCACCCGTACCGATTCATGGTGTTCTTCTACTTCAAC
ACCACGGCGTTCGTCGCGTCGCTGGTCACCATCATGCTGCTCATGAGCAGGACCGTGTCG
CGCCACGGGTTCCGGTCGAGCGCGCTCTGGGTGTGCGTGGGCGCGGCCATGGTCGGGCTC
ATGGGCGCCTTCGCCGCCGGCAGCTGCCGCAGCTTCAAGACGTCCATCTACGTCATCGCG
TTGGTGGGCGCCGTCCTGCTCTACATTGCCATCCAGGCCATGGTGTTCTTCAGCGAGCCC
GTGAAGGATTGGCTCCACCGCGCCGGAGAGACGCTGCAGAAGTGCTTGAAATTGGATGAA
CTGGAGCAGCGAAATCAGCAGCAGATCACACTATCCAACCAAGGCAATGGCGACGCCTAC
CTTCTTCTCAAGAAATCTCGCATGTACTTGCTCCTGCTTGGGATTCTCGCGGCGAGCGTC
ACATACCAAGCAGGACTGAACCCACCGGGAGGCTTCTGGCAAAGCGATGGCACCGACGGT
TACCGCCATTACCTCGCCGGCGATCCGGTTCTTCACATCACGTATCACCGGCGATACATG
GTGTTCTTCTACTCCAACGCCACCGCCTTCATCGCGTCGCTGGTCATCCTCATCCTCCTC
TTGAGCAACATGATTAGCACGCAGGGGATCAAGTACTGTGCGCTGCAGGTCGCCATGATT
CTGAACTTGTTTGGCCTGATCGGAGCTTACGCCGCTGGCAGCTGCAGGCAGGCGTCCAAA
TCCGTGTACGTCTCGGTTCTTGTTCTGCCGGTGTTCCTATATGTAGGTATCCATGTCTTG
GTGTTCATGCTCGAGGTATCTCCGACATGGGCGACATGGCGAGGACGGGTGAGGGAGAAG
CTGAAGCAACGTATGCCTGAATGGCTCAAGAATCTGCTTGAGTTGGAGAAGCATGTCGAG
GAGGAAGAGGAGGAGTGGAAGCTGGAGAAGAGGCGAAAGCTCCTGCTCCTCGTCGCGATT
CTTGCAGCAAGCCTCACCTACGAAGCAGGCATGAACCCACCGGGCGGGTTCTGGCAGGAG
GGCAAGTCCGGCCATGTCGGCGACCCGGTGCTCAACAACGACAACTACCGGCACCGCTAC
CTGGCGTTCTTCTTCTGCAACACGACGGCGTTCGTCGCGTCCTTGGCCATCATCATGCTG
CTGGTGAACCGGAAGCTCTCGGCGAGAGGAATCCGGTCGTACGCGCTGCGGGTGTGCGTG
ATTCTTGTCCTCGTCGGGCTCATGGGCGCCTTCGCCGCCGGCAGCTGCAGGAAGGTGAAG
ACGTCCGTCTACGTCTTCGTCTTGGTCCTCGCCGTTCTGCTCTGCATCGCGTTCCAGGTC
GCACTGGTCGTGTCGGGGTCGCTGCGACGTCTCGTCAACAGCCTCCTCTCCAAGCTAGGG
GCGCCGCTTGAGGAGGACGCCGGTGAGCGGCTGCCGCACACGGCCGCCGACGAGCCTCGC
GATCTCTGGGACGAGAAGCTCCCCAAATACTTGCTGCTCCTCGCTGCGCTCGCGGCGGCC
GTCACCTACCAAGCCGCGATGAGCCCGCCCGGTGGCCTCTGGGATGACGGCCAAACCGAG
CACATCGTTGGTGACCCTGTCCTCCTGACCAACTATGCACGTCGCTACAAGGCCTTCTTC
TACTGCAACGCGACGTCGTTCATGGCGTCGCTGGTGATAATGGTGTTGCTGCTGATCAAG
AGGGTGAGCAACACCCAGCCGGCGCTCCTGGCGCTGCACGCCGCCATGATACTGGACCTG
TTCGGCCTCATGGGCGCGTACGCCGCCGAGAGCTGCAGGAGGGTGACGACGTCGGCTTAC
ATCTTGGCACTGCTCGTCGGGGTTTCGGCGTACATCGTTGTTCTTGTGGTGGTGTCCATT
GGTGTGGCGAGATGGATGAAGAAGGTGATGGACAAGGTGGGGGAGAAGCTCACACACTGC
TTCTCCTTCGAAGATTTGTAG

Peptide Sequence

PEP ID

Os11t0144900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2056281:2059194:1 gene:Os11g0144900 transcript:Os11t0144900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0144900-01)
Sequence

MAADAYADAAPPRRAPAPATSTVAKEAEFLWELRKYVLLLATLAATVTYTAGLDPPGGFW
TDNVGELLAGDPVLQKTYPRRYKAFFYCNATAFVASLVIVNLLLVRFLCRRRWWLRALQA
AMTLDMFGLMGAYAAGSSREAAMSAYILVLVILVCSYVSAHVLLYGLTAQVSAPDAPERV
ERARKYLLIFATLAATVAYQAGLSTPGGFWLGSLDNQHLAGDPMLRGNHPYRFMVFFYFN
TTAFVASLVTIMLLMSRTVSRHGFRSSALWVCVGAAMVGLMGAFAAGSCRSFKTSIYVIA
LVGAVLLYIAIQAMVFFSEPVKDWLHRAGETLQKCLKLDELEQRNQQQITLSNQGNGDAY
LLLKKSRMYLLLLGILAASVTYQAGLNPPGGFWQSDGTDGYRHYLAGDPVLHITYHRRYM
VFFYSNATAFIASLVILILLLSNMISTQGIKYCALQVAMILNLFGLIGAYAAGSCRQASK
SVYVSVLVLPVFLYVGIHVLVFMLEVSPTWATWRGRVREKLKQRMPEWLKNLLELEKHVE
EEEEEWKLEKRRKLLLLVAILAASLTYEAGMNPPGGFWQEGKSGHVGDPVLNNDNYRHRY
LAFFFCNTTAFVASLAIIMLLVNRKLSARGIRSYALRVCVILVLVGLMGAFAAGSCRKVK
TSVYVFVLVLAVLLCIAFQVALVVSGSLRRLVNSLLSKLGAPLEEDAGERLPHTAADEPR
DLWDEKLPKYLLLLAALAAAVTYQAAMSPPGGLWDDGQTEHIVGDPVLLTNYARRYKAFF
YCNATSFMASLVIMVLLLIKRVSNTQPALLALHAAMILDLFGLMGAYAAESCRRVTTSAY
ILALLVGVSAYIVVLVVVSIGVARWMKKVMDKVGEKLTHCFSFEDL

Transcript Sequence

Transcript ID

Os11t0144900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2056281:2059194:1 gene:Os11g0144900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0144900-01)
Sequence

GAAAACAAACACATCGCTAGCAACAATTCGGATTTAGACGCGTTAGGAGGGGGGAATGGC
CGCTGACGCTTACGCTGACGCCGCGCCGCCGCGGCGAGCTCCGGCGCCGGCGACTTCGAC
AGTGGCGAAGGAGGCGGAGTTCCTCTGGGAGCTTCGCAAGTATGTTCTGCTGCTGGCCAC
GCTCGCCGCCACCGTCACCTACACGGCGGGGCTGGACCCGCCGGGCGGGTTCTGGACGGA
CAACGTGGGCGAGCTCCTCGCCGGCGACCCGGTGCTCCAGAAGACCTACCCTCGCCGCTA
CAAGGCCTTCTTCTACTGCAACGCCACCGCGTTCGTCGCCTCCCTCGTCATCGTCAACCT
CCTGCTCGTCCGCTTCCTGTGCCGCCGCCGGTGGTGGCTGCGCGCGCTCCAGGCCGCGAT
GACACTCGACATGTTCGGCCTCATGGGGGCCTACGCCGCCGGCAGCAGCAGGGAGGCGGC
CATGTCCGCCTACATCCTCGTTCTCGTCATCTTGGTTTGCTCCTACGTCTCCGCCCATGT
CCTGCTCTACGGGCTGACGGCGCAGGTGAGCGCGCCGGACGCGCCGGAGCGGGTGGAGCG
CGCGCGCAAGTACCTGCTCATCTTCGCGACTCTGGCGGCGACCGTGGCGTACCAAGCCGG
GCTGAGCACGCCGGGCGGGTTCTGGCTAGGCAGCCTGGACAACCAGCACCTCGCCGGCGA
CCCCATGCTCCGCGGCAACCACCCGTACCGATTCATGGTGTTCTTCTACTTCAACACCAC
GGCGTTCGTCGCGTCGCTGGTCACCATCATGCTGCTCATGAGCAGGACCGTGTCGCGCCA
CGGGTTCCGGTCGAGCGCGCTCTGGGTGTGCGTGGGCGCGGCCATGGTCGGGCTCATGGG
CGCCTTCGCCGCCGGCAGCTGCCGCAGCTTCAAGACGTCCATCTACGTCATCGCGTTGGT
GGGCGCCGTCCTGCTCTACATTGCCATCCAGGCCATGGTGTTCTTCAGCGAGCCCGTGAA
GGATTGGCTCCACCGCGCCGGAGAGACGCTGCAGAAGTGCTTGAAATTGGATGAACTGGA
GCAGCGAAATCAGCAGCAGATCACACTATCCAACCAAGGCAATGGCGACGCCTACCTTCT
TCTCAAGAAATCTCGCATGTACTTGCTCCTGCTTGGGATTCTCGCGGCGAGCGTCACATA
CCAAGCAGGACTGAACCCACCGGGAGGCTTCTGGCAAAGCGATGGCACCGACGGTTACCG
CCATTACCTCGCCGGCGATCCGGTTCTTCACATCACGTATCACCGGCGATACATGGTGTT
CTTCTACTCCAACGCCACCGCCTTCATCGCGTCGCTGGTCATCCTCATCCTCCTCTTGAG
CAACATGATTAGCACGCAGGGGATCAAGTACTGTGCGCTGCAGGTCGCCATGATTCTGAA
CTTGTTTGGCCTGATCGGAGCTTACGCCGCTGGCAGCTGCAGGCAGGCGTCCAAATCCGT
GTACGTCTCGGTTCTTGTTCTGCCGGTGTTCCTATATGTAGGTATCCATGTCTTGGTGTT
CATGCTCGAGGTATCTCCGACATGGGCGACATGGCGAGGACGGGTGAGGGAGAAGCTGAA
GCAACGTATGCCTGAATGGCTCAAGAATCTGCTTGAGTTGGAGAAGCATGTCGAGGAGGA
AGAGGAGGAGTGGAAGCTGGAGAAGAGGCGAAAGCTCCTGCTCCTCGTCGCGATTCTTGC
AGCAAGCCTCACCTACGAAGCAGGCATGAACCCACCGGGCGGGTTCTGGCAGGAGGGCAA
GTCCGGCCATGTCGGCGACCCGGTGCTCAACAACGACAACTACCGGCACCGCTACCTGGC
GTTCTTCTTCTGCAACACGACGGCGTTCGTCGCGTCCTTGGCCATCATCATGCTGCTGGT
GAACCGGAAGCTCTCGGCGAGAGGAATCCGGTCGTACGCGCTGCGGGTGTGCGTGATTCT
TGTCCTCGTCGGGCTCATGGGCGCCTTCGCCGCCGGCAGCTGCAGGAAGGTGAAGACGTC
CGTCTACGTCTTCGTCTTGGTCCTCGCCGTTCTGCTCTGCATCGCGTTCCAGGTCGCACT
GGTCGTGTCGGGGTCGCTGCGACGTCTCGTCAACAGCCTCCTCTCCAAGCTAGGGGCGCC
GCTTGAGGAGGACGCCGGTGAGCGGCTGCCGCACACGGCCGCCGACGAGCCTCGCGATCT
CTGGGACGAGAAGCTCCCCAAATACTTGCTGCTCCTCGCTGCGCTCGCGGCGGCCGTCAC
CTACCAAGCCGCGATGAGCCCGCCCGGTGGCCTCTGGGATGACGGCCAAACCGAGCACAT
CGTTGGTGACCCTGTCCTCCTGACCAACTATGCACGTCGCTACAAGGCCTTCTTCTACTG
CAACGCGACGTCGTTCATGGCGTCGCTGGTGATAATGGTGTTGCTGCTGATCAAGAGGGT
GAGCAACACCCAGCCGGCGCTCCTGGCGCTGCACGCCGCCATGATACTGGACCTGTTCGG
CCTCATGGGCGCGTACGCCGCCGAGAGCTGCAGGAGGGTGACGACGTCGGCTTACATCTT
GGCACTGCTCGTCGGGGTTTCGGCGTACATCGTTGTTCTTGTGGTGGTGTCCATTGGTGT
GGCGAGATGGATGAAGAAGGTGATGGACAAGGTGGGGGAGAAGCTCACACACTGCTTCTC
CTTCGAAGATTTGTAGAGCCTAAGCCTGACTCCATGGCCCCTGATATGGGGCATCTTCCA
TTCTTCCCAGATGGATGGTGATCCTCTCTGTACAGTCACAACTCTGCCTGCAGAGAGAGG
GGTTTTTCCTAGGATTTGTAGGAATTTCTAGTTTAGTTGTTTTCTTTTCTGTACATTGTT
GTTTGTTTTTGAATTGTTGACAGCTTCCAGTTGC