Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0143400-00
CDS Infomation	cds chromosome:IRGSP-1.0:11:2015315:2018150:-1 gene:Os11g0143400 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase, RPB5 subunit domain containing protein. (Os11t0143400-00)
Sequence	ATGAGTCACTCCTCCCCCTACCAGCAATCCTTCACGACAATAGAATCGGCTGAGAGCGCG ACCGCCGCCACCTCAATAGAAACCGCCGAGAGCACCACCGCCGCCCGCGACGTTTCCCCT CCTCCCGCCGCCGCCCCCGCCGCCCGCGACGTTTCCCCTCCCGCCGCCGCCTCCGCCGCA CGCGACGTTTCCCCTCCTCCTGCCGCCGCCCGCGACGTTTCCCCTCCCTCCGCCGCACAC GACGTTTCCCCTCCCGCCGCTGTCTCCGCCCCTCCTCCTGCCGTCGTCCCCGCTGCTGCG CGCGACGCTCCCCCTCCCGCCGTCGCCATGGCGGCGGAGATGGAAGTCGACGACGTCGAC GTGCATGAGGTCCCCGAATGCATAGCATCGATGATCGACCGCGGCAGCGTGGAGAGCCAC CGCCTGTTCCTGGCGCGCCGGACGGCGATGGAGATGCTCCGCGACCGCGGGTACAGCGTG CCGGAGGCCGAGATCGCCCGCACCCTCCCTGAGTTCCGCGCCTGGTGGGCTGAGAAGCCC GGGATCGAACGCCTCGCCTTCACCACCACCCTCGTCTCCGACCCCTCCAAGAAGGTACAA CTTGTATTCTGTCCACCAGAGCCTGTCAAAATCGCAACTATCCGAGAGATATATCTCCAA ACAAAAGAAGAGAACTTGTCCAGGCTTGTTCTGATACTGCAGAGCAAAATATTATCTAGA GCTAGAGAGGCTATCAAGGAGATCTTTAAATTTAAAGTGGACATATTCCAGGCCACAGAT TTACTGGTAAACATTACTAAGCATGTCCTGAAACCCAAGCATGAAGTGTTGAGTGCAGAT CAAAAGGCCAAGCTCCTCAAGGAATACAATGTGGAAGACTCACAGTTGCCACGCATGCTA GAGACTGATGCTGTTGCTCGCTACTATGGCTTTGACAAGGGAACCGTGGTTAAAGTTATA TATGACGGTGAACTTACTGGGAAGCGTGTGGCATACCGATGCGTCTTCTGA

Peptide Sequence

PEP ID	Os11t0143400-00
PEP Infomation	pep chromosome:IRGSP-1.0:11:2015315:2018150:-1 gene:Os11g0143400 transcript:Os11t0143400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase, RPB5 subunit domain containing protein. (Os11t0143400-00)
Sequence	MSHSSPYQQSFTTIESAESATAATSIETAESTTAARDVSPPPAAAPAARDVSPPAAASAA RDVSPPPAAARDVSPPSAAHDVSPPAAVSAPPPAVVPAAARDAPPPAVAMAAEMEVDDVD VHEVPECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKP GIERLAFTTTLVSDPSKKVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSR AREAIKEIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRML ETDAVARYYGFDKGTVVKVIYDGELTGKRVAYRCVF

Transcript Sequence

Transcript ID	Os11t0143400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:2015315:2018150:-1 gene:Os11g0143400 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA-directed RNA polymerase, RPB5 subunit domain containing protein. (Os11t0143400-00)
Sequence	ATGAGTCACTCCTCCCCCTACCAGCAATCCTTCACGACAATAGAATCGGCTGAGAGCGCG ACCGCCGCCACCTCAATAGAAACCGCCGAGAGCACCACCGCCGCCCGCGACGTTTCCCCT CCTCCCGCCGCCGCCCCCGCCGCCCGCGACGTTTCCCCTCCCGCCGCCGCCTCCGCCGCA CGCGACGTTTCCCCTCCTCCTGCCGCCGCCCGCGACGTTTCCCCTCCCTCCGCCGCACAC GACGTTTCCCCTCCCGCCGCTGTCTCCGCCCCTCCTCCTGCCGTCGTCCCCGCTGCTGCG CGCGACGCTCCCCCTCCCGCCGTCGCCATGGCGGCGGAGATGGAAGTCGACGACGTCGAC GTGCATGAGGTCCCCGAATGCATAGCATCGATGATCGACCGCGGCAGCGTGGAGAGCCAC CGCCTGTTCCTGGCGCGCCGGACGGCGATGGAGATGCTCCGCGACCGCGGGTACAGCGTG CCGGAGGCCGAGATCGCCCGCACCCTCCCTGAGTTCCGCGCCTGGTGGGCTGAGAAGCCC GGGATCGAACGCCTCGCCTTCACCACCACCCTCGTCTCCGACCCCTCCAAGAAGGTACAA CTTGTATTCTGTCCACCAGAGCCTGTCAAAATCGCAACTATCCGAGAGATATATCTCCAA ACAAAAGAAGAGAACTTGTCCAGGCTTGTTCTGATACTGCAGAGCAAAATATTATCTAGA GCTAGAGAGGCTATCAAGGAGATCTTTAAATTTAAAGTGGACATATTCCAGGCCACAGAT TTACTGGTAAACATTACTAAGCATGTCCTGAAACCCAAGCATGAAGTGTTGAGTGCAGAT CAAAAGGCCAAGCTCCTCAAGGAATACAATGTGGAAGACTCACAGTTGCCACGCATGCTA GAGACTGATGCTGTTGCTCGCTACTATGGCTTTGACAAGGGAACCGTGGTTAAAGTTATA TATGACGGTGAACTTACTGGGAAGCGTGTGGCATACCGATGCGTCTTCTGAGGGATCCAT GTGTTCCTATGGATGAAGGTTGTAGTAAGTTATTAGCTACTAGTTGTTGATCTATCATCT ATGTGACTCCTCTTTGCGTGATTTACCTGAATGTATTGGGAACTTTACCTGAATGCAGTT GGGAAACTTGCCCATTAAAGTTGTTTGGTAGTGGTTTTAAGATATTCCTTAACAAATATG GCACAAGATGTTTTCAGTGGCCCTTAATCTCAGCAGGAATTTGAAGGCTTAACTG