Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0143200-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:2007030:2010116:-1 gene:Os11g0143200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD1 description:Similar to Cytochrome P450 90A1 (EC 1.14.-.-). (Os11t0143200-01)
Sequence

ATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCATCGTCGTGGTTGCCATG
GTGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCG
CTGATGCCGCCGGGGAGCACGGGCCTGCCGCTGATTGGCGAGACGCTGCGGCTCATCTCG
GCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGC
GTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAAC
CGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCC
ACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCAC
TCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGAC
CGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTGCGCCTCATGGAC
GAGGCCAAGAAAATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGA
CCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATC
CCCTTTCCTCTCGCCAACCTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGG
AAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAG
AATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTTGAGGAG
CTTCTTGAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCT
CTGCTGGTGGCTGGGTATGAGACTACGTCCATGCTCATGACGCTCGCGGTCAAGTTCCTC
ACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATG
AAAGGGAAAAAACAACCACTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGT
GTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAAC
ACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTC
CGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGA
TGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGC
GGTGGACCCCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTC
CATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTC
CCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATT
TGCTGA

Peptide Sequence

PEP ID

Os11t0143200-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:2007030:2010116:-1 gene:Os11g0143200 transcript:Os11t0143200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD1 description:Similar to Cytochrome P450 90A1 (EC 1.14.-.-). (Os11t0143200-01)
Sequence

MAAAALLLLAAAAAIVVVAMVLRWLLLLGGPAAGRLGKRALMPPGSTGLPLIGETLRLIS
AYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRLLLAAEGRAVHSSYPSSIA
TLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHIDRLVLATMRQWEPAATVRLMD
EAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFFSIPFPLANLLPFTTYGQALKAR
KKVAGALREVIKKRMEEKAENGGSIGDDEGKKEKKDMVEELLEAEGGSFSEEEMVDFCLS
LLVAGYETTSMLMTLAVKFLTETPAALAELKEEHANIRDMKGKKQPLEWSDYKSMPFTQC
VINETLRVGNIISGVFRRANTDIHYKDYTIPKGCKIFASFRAVHLNNEHYENARTFNPWR
WQINNKLQNAVGANIFTPFGGGPRLCPGYELARVVVSIFLHHLVTRFSWEETEEDRLVFF
PTTRTLKGYPINLRLLSESIC

Transcript Sequence

Transcript ID

Os11t0143200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:2007030:2010116:-1 gene:Os11g0143200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD1 description:Similar to Cytochrome P450 90A1 (EC 1.14.-.-). (Os11t0143200-01)
Sequence

GTCGGAGCCTCATCAATCTCACTCGCTCCTTGCCCACGCCGCGCACGCCCACGCCGCCAT
GGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCATCGTCGTGGTTGCCATGGT
GCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCGCT
GATGCCGCCGGGGAGCACGGGCCTGCCGCTGATTGGCGAGACGCTGCGGCTCATCTCGGC
GTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGCGT
GTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAACCG
CCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCCAC
GCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCACTC
CCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGACCG
CCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTGCGCCTCATGGACGA
GGCCAAGAAAATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGACC
GTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATCCC
CTTTCCTCTCGCCAACCTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGGAA
GAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAGAA
TGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTTGAGGAGCT
TCTTGAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCTCT
GCTGGTGGCTGGGTATGAGACTACGTCCATGCTCATGACGCTCGCGGTCAAGTTCCTCAC
TGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATGAA
AGGGAAAAAACAACCACTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGTGT
GATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAACAC
TGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTCCG
AGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGATG
GCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGCGG
TGGACCCCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTCCA
TCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTCCC
CACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATTTG
CTGACGTTAGGTCGTTTTGCAGCTGCTCTTATCTTGGAAGAAAGACTAAACATAGAAAAA
ATTATAGAAAAATAGTTCTCGCATAGGTAGTGCATTTCCCTCTTTTTTGTTGATCTGTAA
CTTGGTATGTAAACAGTAGGCAGCAGAGTTGTGCTGCTTGTAAAATGACCTAAAATGCTG
TGGATACCGGTTACAAGC