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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0141400-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1931458:1932198:1 gene:Os11g0141400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF hand family protein, expressed. (Os11t0141400-01)
Sequence

TTCGGCTCTTCTTCTTCTTCGTCTTCGTCTTCCTCCAAGAAGAGGAGGAAGAAGAGGAGG
AGCGGCGCCAAGAGCTGCTCCTTCGGCTCCACCACGTCTTCGTCGTCGTCGTCGTTGGCG
GCGTCATCATCCGATGATTCCGCCGCCACCACGCCGAGATCCGTGTTGCCGGCGTCGGCG
GCGGCGTCCTCCTCCGGCACCAAAAAGCCGGCGGCGGTGGCCGTGACGCGGGAGGACCTG
GAGGTGGCCCTGCGGAGGATCGTGTCGAGCAAGGAGGAGCTGGCCGCGATGCTCGCCGAG
GCGGAGTGCGCCGGGGAGCTCGTGCTGGAGGAGATCGCGGCCGCGGCGGCGGACGAGGGC
GAGCTGAAGGAGACGTTCGCGGTGTTCGACGCCGACGGGGACGGGAGGATCTCCGCCGAG
GAGCTCCGCGCCGTGCTCGCGTCGCTCGGCGACGAGCTCTGCTCCGTCGACGACTGCCGC
CGCATGATCGGCGGCGTGGACACCGACGGCGACGGGTTCGTCTGCTTCGACGAGTTCGCC
CGCATGATGATGTATGGCTGCGCGTGA

Peptide Sequence

PEP ID

Os11t0141400-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1931458:1932198:1 gene:Os11g0141400 transcript:Os11t0141400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF hand family protein, expressed. (Os11t0141400-01)
Sequence

FGSSSSSSSSSSKKRRKKRRSGAKSCSFGSTTSSSSSSLAASSSDDSAATTPRSVLPASA
AASSSGTKKPAAVAVTREDLEVALRRIVSSKEELAAMLAEAECAGELVLEEIAAAAADEG
ELKETFAVFDADGDGRISAEELRAVLASLGDELCSVDDCRRMIGGVDTDGDGFVCFDEFA
RMMMYGCA

Transcript Sequence

Transcript ID

Os11t0141400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1931458:1932198:1 gene:Os11g0141400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF hand family protein, expressed. (Os11t0141400-01)
Sequence

GTTCGGCTCTTCTTCTTCTTCGTCTTCGTCTTCCTCCAAGAAGAGGAGGAAGAAGAGGAG
GAGCGGCGCCAAGAGCTGCTCCTTCGGCTCCACCACGTCTTCGTCGTCGTCGTCGTTGGC
GGCGTCATCATCCGATGATTCCGCCGCCACCACGCCGAGATCCGTGTTGCCGGCGTCGGC
GGCGGCGTCCTCCTCCGGCACCAAAAAGCCGGCGGCGGTGGCCGTGACGCGGGAGGACCT
GGAGGTGGCCCTGCGGAGGATCGTGTCGAGCAAGGAGGAGCTGGCCGCGATGCTCGCCGA
GGCGGAGTGCGCCGGGGAGCTCGTGCTGGAGGAGATCGCGGCCGCGGCGGCGGACGAGGG
CGAGCTGAAGGAGACGTTCGCGGTGTTCGACGCCGACGGGGACGGGAGGATCTCCGCCGA
GGAGCTCCGCGCCGTGCTCGCGTCGCTCGGCGACGAGCTCTGCTCCGTCGACGACTGCCG
CCGCATGATCGGCGGCGTGGACACCGACGGCGACGGGTTCGTCTGCTTCGACGAGTTCGC
CCGCATGATGATGTATGGCTGCGCGTGATTATATATTGGTTACTAGGTTTTGATCGATGT
ACGTAATGCATGTTAATCGATCGTCTCCTGTATGTACGTGTCGTTCATCTGCTGTTCATT
GTCTCCACTGATTTCTTTTGTTCTCTTTGTACGTAGTACGAGTTTCACAGAAGAAATGAA
CAGAACGGTCAGTTTAGATCG