Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0140900-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1887131:1892676:1 gene:Os11g0140900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0140900-01)
Sequence

ATGGGGAATTGGAATCACCATCGGCGGCCATGGTACAGGAGGACCCGCCACGACCGCGCT
CCACGACCGCCTTCCCCTCCTCCTGATCTCGGACACAATTGCCACCCAATCCCATTATGG
GAAAGGGAATTTTGCATTTATGTTGGCGGCATTTCTTGGCACAGGTTCTGTGACAACAAG
AGATATGTCTGCATGTATAAGAACATAGAGCAATGGGATGACTCAGAAGCCTTTGATAAT
TTTAAGAATGCAAAGGCTAGATTCTGGGCTAATTACCATGGTCAACCTTCAGACATATCT
TTGCCAGACCCTGATATGTATATTGACAAGGTTGACCACAATAGCAAGATCGACCCTGAG
TTGATAGCTGACCTGAATATGGTACGGTTACCATTCGAGATGGATGATGAGTTACTCCCA
GCTGATGGATTGGGCAGCACTGATACAGATAACAAGTGCCAGCAGAGGCAGAACCAATCT
AGAAACTGGGACATCTATGTAGAAAAGCCCACCGAAGTTAACAAGTGGGAGCAAGATTCA
AGATCCAACATGGACTGGGGAACAAAGCATGAATCTTGGAATGAGTGGAGTAAAAATTGC
TCTGGTTGGGGTAGTGCCTTGGCGGATTCTAGTTGGGGCAATTGGAATAATAGTAACAAT
CATCATTCATCAAATAACAGGGCTAGCTTCAATGGGATCAACAGGAATAGATACCAGGAC
CCAAGCAGCATATCTGGAAGGAAAAGGAATAGTGGTGGGTACATTCAGCAAAGAAACAGT
AGACAGAGAAACCAGATTGAGGGCTACCAAGGAAGTAGATGGTGA

Peptide Sequence

PEP ID

Os11t0140900-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1887131:1892676:1 gene:Os11g0140900 transcript:Os11t0140900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0140900-01)
Sequence

MGNWNHHRRPWYRRTRHDRAPRPPSPPPDLGHNCHPIPLWEREFCIYVGGISWHRFCDNK
RYVCMYKNIEQWDDSEAFDNFKNAKARFWANYHGQPSDISLPDPDMYIDKVDHNSKIDPE
LIADLNMVRLPFEMDDELLPADGLGSTDTDNKCQQRQNQSRNWDIYVEKPTEVNKWEQDS
RSNMDWGTKHESWNEWSKNCSGWGSALADSSWGNWNNSNNHHSSNNRASFNGINRNRYQD
PSSISGRKRNSGGYIQQRNSRQRNQIEGYQGSRW

Transcript Sequence

Transcript ID

Os11t0140900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1887131:1892676:1 gene:Os11g0140900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os11t0140900-01)
Sequence

GAAGGGAGCAGTCAACAGCTAACACTCTACCCGCCACGGTCGCCAGCAGCATGGGGCGCT
GGCGGACGAGAGAGCACCTCGCCGCGGCCTCCAATCTCGCTCCACGAATCGCTGCCTTGG
AAACCGAGCTCCCGCGCTCGCGGGGCACACCCACGAGCACACCCGTACCAGGGGACGAGG
AGGTGGAGGGCTTGGAAGCAGAAACCTGCGCCGGGAGGCATGGGCGGCAGGTGGAGGTGG
TGCTACTGACGGGGCGCGCGGCCATGGCGACGCAGAGCATGGAGGAGTGGAGGGAGAAGA
GGGAGAAGAGACGCTGCTGCTTGGGTCAAAGGGAGAAGAAGGCCACACGCCCGCGAGGAG
ACGTATAGCCTTCGATGGGCCGGGGGCCCACGAGTCAGTGCGACGCAAGCAGCTTCATCT
TTTGGCTTCATTTAAAGCTATAGCTTTCTCCGGCAAGCCGTCGCCTCAGCTCATCTCACT
GTTTGCGAAATTGCGGCGGCGGCGCCCAATCTCGCGGTGCAGGGGCGGCGCCTAGTTCCA
TGGCGAGATAGCATTCCGGTTTGCCGGAGGAGATTGCCGTCAAGAGCGAGAGAGAGCATC
GGCGAATCATTTTGAGTCTGGTGTTCCTCCTCTTCCTCCCGGCGATGGGGAATTGGAATC
ACCATCGGCGGCCATGGTACAGGAGGACCCGCCACGACCGCGCTCCACGACCGCCTTCCC
CTCCTCCTGATCTCGGACACAATTGCCACCCAATCCCATTATGGGAAAGGGAATTTTGCA
TTTATGTTGGCGGCATTTCTTGGCACAGGTTCTGTGACAACAAGAGATATGTCTGCATGT
ATAAGAACATAGAGCAATGGGATGACTCAGAAGCCTTTGATAATTTTAAGAATGCAAAGG
CTAGATTCTGGGCTAATTACCATGGTCAACCTTCAGACATATCTTTGCCAGACCCTGATA
TGTATATTGACAAGGTTGACCACAATAGCAAGATCGACCCTGAGTTGATAGCTGACCTGA
ATATGGTACGGTTACCATTCGAGATGGATGATGAGTTACTCCCAGCTGATGGATTGGGCA
GCACTGATACAGATAACAAGTGCCAGCAGAGGCAGAACCAATCTAGAAACTGGGACATCT
ATGTAGAAAAGCCCACCGAAGTTAACAAGTGGGAGCAAGATTCAAGATCCAACATGGACT
GGGGAACAAAGCATGAATCTTGGAATGAGTGGAGTAAAAATTGCTCTGGTTGGGGTAGTG
CCTTGGCGGATTCTAGTTGGGGCAATTGGAATAATAGTAACAATCATCATTCATCAAATA
ACAGGGCTAGCTTCAATGGGATCAACAGGAATAGATACCAGGACCCAAGCAGCATATCTG
GAAGGAAAAGGAATAGTGGTGGGTACATTCAGCAAAGAAACAGTAGACAGAGAAACCAGA
TTGAGGGCTACCAAGGAAGTAGATGGTGAGACCCTAAAGAAAAGAACATCTCTTTACATA
ATAGTGTAAATGGCCACACAATAGAATGTGGCTTCTTAGTTAGTAGTTTGAAAGATTGGA
TGAGAAATGAATCCTTGTGATCTTTTTGTCTGGAGCAGTTGGCAATACTTAGCAGTTTGA
ACAATTATACATGTAAAGAGATGTTTGAGTTATTTTTCCTGTTAGTCTATGGAAAGAAAG
TTTCTTC