Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os11t0140400-01
CDS Infomation	cds chromosome:IRGSP-1.0:11:1859333:1865302:1 gene:Os11g0140400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 4 description:Similar to autoinhibited calcium ATPase. (Os11t0140400-01)
Sequence	ATGGAGAAGCTTGACAGGTACCTGCAGGAGCACTTCGATGTGCCGGCCAAGAACCCGTCG GAGGAGGCGCAGCGGCGATGGCGGCAAGCCGTTGGCACCATCGTCAAGAACCGCCGCCGC CGCTTCCGCTGGGTGCCCGACCTCGACCGCCGCTCCTTGGACAAGGCCAAGGTCCGCTCC ACCCAGGAAAAGATTCGGGTTGCCCTCTATGTGCAGCAGGCTGCACTCATTTTTAGTGAT GATGAACTAGCATTGATCACAAGCAAGCATGATTCGAAAGCTTTAAAGATGCATGGTGGG GTAGATGGGATATCTAAAAAAGTCCGTTCATCGTTTGATCATGGCATATGTGCTAGTGAC TTAGATACAAGACAGAACATATATGGCGTCAACCGTTATGCAGAAAAGCCTTCAAGAAGT TTCTGGATGTTTGTTTGGGATGCATTCCAGGACATGACCCTTATAATTCTTATGGTATGT GCATTGCTATCTGTTGCAGTTGGTTTGGCAACAGAAGGATGGCCAAAGGGCATGTATGAT GGCTTGGGTATAATACTCAGCATTTTCTTAGTTGTTATGGTTACTGCTGTTAGTGATTAT AAGCAGTCACTCCAATTTAAGGAGCTAGACAATGAAAAGAAAAAGATATTTATCCATGTA ACCAGAGATGGGCGTCGACAAAAGATCTCTATATATGACTTGGTAGTTGGTGATATAGTT CATCTGTCAATTGGAGATCAAGTACCTGCTGATGGACTATATATACATGGGTACTCCCTT TTGATTGATGAGTCCAGCTTATCTGGTGAGAGTGACCCAGTGTATGTTTCTCAAGACAAA CCATTCATCTTGGCAGGAACTAAAGTGCAAGATGGATCTGCTAAGATGATAGTAACTGCT GTCGGTATGCGCACTGAATGGGGAAAATTGATGAGCACATTGAGTGAGGGAGGAGAGGAT GAGACACCACTGCAGGTTAAGCTAAATGGAGTTGCGACCGTTATAGGAAAGATTGGACTG GTATTTGCCATATTAACATTTTTAGTTCTGCTGGTTAGATTCCTCATTGACAAAGGCATG ACGGTTGGTCTGCTCAAATGGTATTCTACCGATGCATTGACTATAGTAAACTACTTTGCA ACAGCGGTAACCATTATAGTTGTTGCTGTACCTGAAGGATTACCCTTGGCTGTTACTTTG AGTCTTGCATTTGCAATGAAAAAGTTAATGAATGATAAAGCACTTGTTAGACATCTTTCA GCGTGCGAAACAATGGGATCTGCTGGTACCATCTGCACGGACAAAACAGGAACTTTGACT ACTAACTATATGGTTGTTGACAAAATATGGATATCTGAGGTTTCAAAGTCAGTTACCAGT AACACCATTTCAGGAGAACTTAATTCTGTGGTTTCTTCTAGAACATTGAGTCTGCTTTTG CAGGGAATTTTTGAGAATACTAGCGCTGAGGTGGTCAAGGAAAAGGATGGCAAGCAAACT GTCTTAGGAACTCCAACAGAAAGAGCAATATTAGAATTTGGCTTGGGCTTGGAAGGAGTT CATGATGCTGAGTATAGTGCCTGCACCAAGGTTAAGGTTGAGCCTTTCAATTCAGTCAAG AAGAAGATGGCAGTGCTGATTTCATTACCCAGTGGCACGTCCAGATGGTTTTGCAAAGGT GCATCAGAAATTATTTTGCAGATGTGCGACATGATGGTTGATGGCGATGGAAATGCTATT CCCTTATCGGAAGCTCAGAGAAAGAACATCTTAGATACTATCAACTCATTTGCTTCAGAT GCTTTAAGGACGTTGTGCCTGGCATATAAGGAAGTGGATGATGATATTGATGACAATGCA GATAGTCCAACAAGTGGTTTTACTCTAATAGCCATTTTCGGTATCAAGGATCCTGTGCGC CCTGGAGTTAAGGATGCTGTTAAGACCTGTATGTCTGCTGGTATCACAGTAAGAATGGTA ACTGGTGATAATATAAATACAGCTAAAGCTATAGCTAAAGAGTGTGGAATATTGACTGAA GATGGTGTAGCAATAGAAGGACCAGAATTCCATAGCAAGAGCCCAGAAGAGATGAGGGAC CTGATACCGAATATTCAGGTTATGGCCCGTTCTTTACCATTGGATAAACATACACTCGTG ACAAACTTGCGAGGTATGTTTGATGAGGTGGTTTCTGTGACAGGTGATGGTACAAATGAT GCTCCTGCATTACACGAAGCAGATATCGGGCTTGCTATGGGCATTGCAGGAACAGAGGTT GCCAAGGAGAGTGCAGATGTCATAGTACTTGACGACAATTTCACTACTATAATAAATGTT GCAAGATGGGGTCGTGCAGTTTATATTAACATCCAAAAGTTTGTGCAGTTTCAATTGACT GTCAATATTGTTGCTTTAGTTATCAATTTTGTCTCAGCATGCATCACAGGGAGCGCTCCT CTCACTGCTGTGCAGCTATTGTGGGTCAATATGATCATGGATACACTGGGAGCTTTAGCA CTAGCAACAGAGCCTCCAAATGATGAAATGATGAAGAGGCCACCTGTCCGAAAAGGGGAA AGTTTCATTACCAAGGTCATGTGGAGAAAGCCTTCTGAACATCAAGGGTGCAGATTCCAA ATCCATCATAAATACACTGATCTTCAACTCCTTCGTGTTTTGTCAGGTATTCAATGA

Peptide Sequence

PEP ID	Os11t0140400-01
PEP Infomation	pep chromosome:IRGSP-1.0:11:1859333:1865302:1 gene:Os11g0140400 transcript:Os11t0140400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 4 description:Similar to autoinhibited calcium ATPase. (Os11t0140400-01)
Sequence	MEKLDRYLQEHFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRS TQEKIRVALYVQQAALIFSDDELALITSKHDSKALKMHGGVDGISKKVRSSFDHGICASD LDTRQNIYGVNRYAEKPSRSFWMFVWDAFQDMTLIILMVCALLSVAVGLATEGWPKGMYD GLGIILSIFLVVMVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIV HLSIGDQVPADGLYIHGYSLLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTA VGMRTEWGKLMSTLSEGGEDETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLIDKGM TVGLLKWYSTDALTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLS ACETMGSAGTICTDKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLL QGIFENTSAEVVKEKDGKQTVLGTPTERAILEFGLGLEGVHDAEYSACTKVKVEPFNSVK KKMAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASD ALRTLCLAYKEVDDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMV TGDNINTAKAIAKECGILTEDGVAIEGPEFHSKSPEEMRDLIPNIQVMARSLPLDKHTLV TNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDNFTTIINV ARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIMDTLGALA LATEPPNDEMMKRPPVRKGESFITKVMWRKPSEHQGCRFQIHHKYTDLQLLRVLSGIQ

Transcript Sequence

Transcript ID	Os11t0140400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:11:1859333:1865302:1 gene:Os11g0140400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CA2+-ATPASE 4 description:Similar to autoinhibited calcium ATPase. (Os11t0140400-01)
Sequence	GTGAGCGTGAGCGTGCTCACCGGCCGGGGATGGAGAAGCTTGACAGGTACCTGCAGGAGC ACTTCGATGTGCCGGCCAAGAACCCGTCGGAGGAGGCGCAGCGGCGATGGCGGCAAGCCG TTGGCACCATCGTCAAGAACCGCCGCCGCCGCTTCCGCTGGGTGCCCGACCTCGACCGCC GCTCCTTGGACAAGGCCAAGGTCCGCTCCACCCAGGAAAAGATTCGGGTTGCCCTCTATG TGCAGCAGGCTGCACTCATTTTTAGTGATGATGAACTAGCATTGATCACAAGCAAGCATG ATTCGAAAGCTTTAAAGATGCATGGTGGGGTAGATGGGATATCTAAAAAAGTCCGTTCAT CGTTTGATCATGGCATATGTGCTAGTGACTTAGATACAAGACAGAACATATATGGCGTCA ACCGTTATGCAGAAAAGCCTTCAAGAAGTTTCTGGATGTTTGTTTGGGATGCATTCCAGG ACATGACCCTTATAATTCTTATGGTATGTGCATTGCTATCTGTTGCAGTTGGTTTGGCAA CAGAAGGATGGCCAAAGGGCATGTATGATGGCTTGGGTATAATACTCAGCATTTTCTTAG TTGTTATGGTTACTGCTGTTAGTGATTATAAGCAGTCACTCCAATTTAAGGAGCTAGACA ATGAAAAGAAAAAGATATTTATCCATGTAACCAGAGATGGGCGTCGACAAAAGATCTCTA TATATGACTTGGTAGTTGGTGATATAGTTCATCTGTCAATTGGAGATCAAGTACCTGCTG ATGGACTATATATACATGGGTACTCCCTTTTGATTGATGAGTCCAGCTTATCTGGTGAGA GTGACCCAGTGTATGTTTCTCAAGACAAACCATTCATCTTGGCAGGAACTAAAGTGCAAG ATGGATCTGCTAAGATGATAGTAACTGCTGTCGGTATGCGCACTGAATGGGGAAAATTGA TGAGCACATTGAGTGAGGGAGGAGAGGATGAGACACCACTGCAGGTTAAGCTAAATGGAG TTGCGACCGTTATAGGAAAGATTGGACTGGTATTTGCCATATTAACATTTTTAGTTCTGC TGGTTAGATTCCTCATTGACAAAGGCATGACGGTTGGTCTGCTCAAATGGTATTCTACCG ATGCATTGACTATAGTAAACTACTTTGCAACAGCGGTAACCATTATAGTTGTTGCTGTAC CTGAAGGATTACCCTTGGCTGTTACTTTGAGTCTTGCATTTGCAATGAAAAAGTTAATGA ATGATAAAGCACTTGTTAGACATCTTTCAGCGTGCGAAACAATGGGATCTGCTGGTACCA TCTGCACGGACAAAACAGGAACTTTGACTACTAACTATATGGTTGTTGACAAAATATGGA TATCTGAGGTTTCAAAGTCAGTTACCAGTAACACCATTTCAGGAGAACTTAATTCTGTGG TTTCTTCTAGAACATTGAGTCTGCTTTTGCAGGGAATTTTTGAGAATACTAGCGCTGAGG TGGTCAAGGAAAAGGATGGCAAGCAAACTGTCTTAGGAACTCCAACAGAAAGAGCAATAT TAGAATTTGGCTTGGGCTTGGAAGGAGTTCATGATGCTGAGTATAGTGCCTGCACCAAGG TTAAGGTTGAGCCTTTCAATTCAGTCAAGAAGAAGATGGCAGTGCTGATTTCATTACCCA GTGGCACGTCCAGATGGTTTTGCAAAGGTGCATCAGAAATTATTTTGCAGATGTGCGACA TGATGGTTGATGGCGATGGAAATGCTATTCCCTTATCGGAAGCTCAGAGAAAGAACATCT TAGATACTATCAACTCATTTGCTTCAGATGCTTTAAGGACGTTGTGCCTGGCATATAAGG AAGTGGATGATGATATTGATGACAATGCAGATAGTCCAACAAGTGGTTTTACTCTAATAG CCATTTTCGGTATCAAGGATCCTGTGCGCCCTGGAGTTAAGGATGCTGTTAAGACCTGTA TGTCTGCTGGTATCACAGTAAGAATGGTAACTGGTGATAATATAAATACAGCTAAAGCTA TAGCTAAAGAGTGTGGAATATTGACTGAAGATGGTGTAGCAATAGAAGGACCAGAATTCC ATAGCAAGAGCCCAGAAGAGATGAGGGACCTGATACCGAATATTCAGGTTATGGCCCGTT CTTTACCATTGGATAAACATACACTCGTGACAAACTTGCGAGGTATGTTTGATGAGGTGG TTTCTGTGACAGGTGATGGTACAAATGATGCTCCTGCATTACACGAAGCAGATATCGGGC TTGCTATGGGCATTGCAGGAACAGAGGTTGCCAAGGAGAGTGCAGATGTCATAGTACTTG ACGACAATTTCACTACTATAATAAATGTTGCAAGATGGGGTCGTGCAGTTTATATTAACA TCCAAAAGTTTGTGCAGTTTCAATTGACTGTCAATATTGTTGCTTTAGTTATCAATTTTG TCTCAGCATGCATCACAGGGAGCGCTCCTCTCACTGCTGTGCAGCTATTGTGGGTCAATA TGATCATGGATACACTGGGAGCTTTAGCACTAGCAACAGAGCCTCCAAATGATGAAATGA TGAAGAGGCCACCTGTCCGAAAAGGGGAAAGTTTCATTACCAAGGTCATGTGGAGAAAGC CTTCTGAACATCAAGGGTGCAGATTCCAAATCCATCATAAATACACTGATCTTCAACTCC TTCGTGTTTTGTCAGGTATTCAATGAAATAAACAGCAGAGAAATGCAGAAGATCAATGTT TTCCGTGGTATCATCAGCAATTGGATCTTCATTGCAGTCATAGCTGCAACCGTAGCATTT CAAGTGGTGATCATAGAGTTTCTTGGCACTTTCGCCAGTACTGTTCCGCTCAACTGGCAA CATTGGCTGCTCAGCGTCGGCCTTGGCTCCATCAGCCTGATTGTTGGTGTCATCTTGAAG TGTATACCAGTTGGTTCAGGTGAAACCTCTGCAACTCCAAATGGATACAGGCCACTTGCC AATGGCCCTGATGACATATAGCTGAAGAATAATCACTAATAAGGGAAAGTAGAATCCAGG GTGCAATACGGCATCCAGCTGCCCAGCTCAGTTCAGTTGTTTTGGAATACACTAACCATC CACTGATTTTGTTCAAATTTTGCCAAACTGCACTATATCCTGTCATGTAATTGTTACTAC ATCACACGTTACTGATGTGCACCTTTACCACTCTGCTTTCAACTTCAGACTTTATTGTAT CAGTGAATTCATATGATAGACGGTTGTTAGTGCAACAAGTTATTGTGGTTTGGATTCACA CTG