Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0140100-02
CDS Infomation

cds chromosome:IRGSP-1.0:11:1849546:1853976:-1 gene:Os11g0140100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mitochondrial glycoprotein. (Os11t0140100-01);Mitochondrial glycoprotein family protein. (Os11t0140100-02)
Sequence

ATGTCGCTGCGCCGCCTGGCCGCGTCCGCCCTGCGCCGCGGCGGCGCCAACGACGGCGGC
GTGCTGGCCGCCGTCCGCGCCGAGATCGCTCATGAGCTCTCCTCCTCCCCCTCCTCCTCT
CCTCCGTCGCTCCAATCCCAGGACATTCCTGATTTCTCCACCGTGTCGGACGCGCCGCGC
GGGCAGGAGGTGCTCCTGCGCCGCCGGGATGCTTCCGAGGAGGTCCTCGTGTCGGCGGTG
CTCGCGCCGCTGCGGTTCGAAGGGGAGGAGCCCCTGCCCAGGGACGCGCTCATGAAGGTG
TTCGTCAGTAAGCCTGATGTGAAGCCGGTGATGCGGTTCGATTGCCGCGCGTTTGCAGCT
GAAGGTGATGGCGGCTCTGCTGACTATGATGTTACTGCTGTTTGTTACCACCCGTTTGCT
GGCGAGTGCGACGCTGGGGAAGACAAGTATGAAGGGCCGGAGTTCAGAAATTTGGATCCG
CAGTTACAGGTTGCATTGAAAGGGTATATGGTGGCAAGAGGCGTTAACTCCAAACTGGCA
AGCTTACTTCACCACCATTTGGTTGAGAAGGAGCGGTGGCAATATATGAACTGGCTGAAA
ACTTTGGAAGAAATGTTCAGCAAAGATCATTGA

Peptide Sequence

PEP ID

Os11t0140100-02
PEP Infomation

pep chromosome:IRGSP-1.0:11:1849546:1853976:-1 gene:Os11g0140100 transcript:Os11t0140100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mitochondrial glycoprotein. (Os11t0140100-01);Mitochondrial glycoprotein family protein. (Os11t0140100-02)
Sequence

MSLRRLAASALRRGGANDGGVLAAVRAEIAHELSSSPSSSPPSLQSQDIPDFSTVSDAPR
GQEVLLRRRDASEEVLVSAVLAPLRFEGEEPLPRDALMKVFVSKPDVKPVMRFDCRAFAA
EGDGGSADYDVTAVCYHPFAGECDAGEDKYEGPEFRNLDPQLQVALKGYMVARGVNSKLA
SLLHHHLVEKERWQYMNWLKTLEEMFSKDH

Transcript Sequence

Transcript ID

Os11t0140100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1849546:1853976:-1 gene:Os11g0140100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mitochondrial glycoprotein. (Os11t0140100-01);Mitochondrial glycoprotein family protein. (Os11t0140100-02)
Sequence

ACCGATTCCTGCGTGATGTCGCTGCGCCGCCTGGCCGCGTCCGCCCTGCGCCGCGGCGGC
GCCAACGACGGCGGCGTGCTGGCCGCCGTCCGCGCCGAGATCGCTCATGAGCTCTCCTCC
TCCCCCTCCTCCTCTCCTCCGTCGCTCCAATCCCAGGACATTCCTGATTTCTCCACCGTG
TCGGACGCGCCGCGCGGGCAGGAGGTGCTCCTGCGCCGCCGGGATGCTTCCGAGGAGGTC
CTCGTGTCGGCGGTGCTCGCGCCGCTGCGGTTCGAAGGGGAGGAGCCCCTGCCCAGGGAC
GCGCTCATGAAGGTGTTCGTCAGTAAGCCTGATGTGAAGCCGGTGATGCGGTTCGATTGC
CGCGCGTTTGCAGCTGAAGGTGATGGCGGCTCTGCTGACTATGATGTTACTGCTGTTTGT
TACCACCCGTTTGCTGGCGAGTGCGACGCTGGGGAAGACAAGTATGAAGGGCCGGAGTTC
AGAAATTTGGATCCGCAGTTACAGGTTGCATTGAAAGGGTATATGGTGGCAAGAGGCGTT
AACTCCAAACTGGCAAGCTTACTTCACCACCATTTGGTTGAGAAGGAGCGGTGGCAATAT
ATGAACTGGCTGAAAACTTTGGAAGAAATGTTCAGCAAAGATCATTGACAAAATATTTCC
AGTACCGAAGACCATTAAATTGTTCCAGTCAAATGCGCACACTTTTGTTGTGACAAACTG
GCAATGCATAGATGCTAGCTTCGGAATGCAATTGCGGTGCTTAATTTAGTTTCGTGGAAT
GAACCACGAAATCACCATACTTTGCTCGAATCTAAATTTTTTTATTTCGAGCTTGCAATG
GAGGGAATTTGCTG