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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os11t0138700-01
CDS Infomation

cds chromosome:IRGSP-1.0:11:1801184:1802662:1 gene:Os11g0138700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 566 description:Kelch-type beta propeller domain containing protein. (Os11t0138700-01)
Sequence

ATGCCCGCCGCCGAGAGCTGCCACTCCCGCAGCCTCTCGTGGCTCGTCAAGTCCTGCATC
CCCGCCGACCCCGCCCGCCACATCGCCGTCCCCGTTCTTTGCCCCACCCCGCAACCGCCG
CCTCCCTCGTCGCCGCCGGCACCCCCAATCTCCACCCTCCCCGACGACCTCCTCCTCGAG
TGCCTCGCCCGCGTCCCCCGCGCCTCCCTCCCTCCGCTCCCCGCCGTCTCCCGCCGCTTC
GCCACGCTCCTCGCCTCCGACGCCTTCCTCCACCTCCGCCGCGCCCACGCCCACCTCCGC
CCCTCCCTCCTCGCCCTCTCCGTCTCCGACAACGGTTGCGTCCCGCAGGCGCTGCTCCGG
TTTGAATCCTCCGTGCCCGTGCTCGAGGTCGCCCCGCTGCCGTTGCCCCCGACCCTGCTG
CATTGCGGCGGCTCTGTGTTCGCGCATGCCCGCGCGGTCGTGCTGGGACGGGATGTCTTC
CTCATCGGCCGCGGGGCGACGCTGCGCGTCGACGCGCTCACCGGCGCCGCCCGCGCGTGC
GCACCCACGCTCTTCCCGCGGAAGAAGTTCGCCGCGGCCGCCGTGGGTGATCGGATCTAC
GTCGCCGGCGGATCCGCGCGCACCGCGGCGGTCGAGGAGTACGACCCGGAGGTCGACGCG
TGGCGCGTGGTCGGCGAGGCCCCGCGGCGGAGGTACGGGTGCGCCGGCGCGAGTGCGGGA
GGCGTGTTCTACGTCGCCGGGGGCGTCGCGGTGTCCGGCGAGGGCGCGCGGGCGCTCGAG
GCGCACGTGTGCGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGGCACCTGGGCGCGC
CCCCGTGCGCTCCCCGGCGGCGGCTGTGTCGTGGGGGCGTGCGGCGTCGGTGACCACCTG
TACGTAGTAGCCAGCCACGCGGTGGAGCTCTCCTTCTGGAGGTGGTCCGGCGCCACCGGC
CGTGGCGGTGACGGCAGAGGCTGGGGCGGGTGGGTGGCGCTCGAGGCGCCGCCGATGCCG
AGGGGGTCGGTGGGGCTCGGCATGGCGGTGCGCGTGGCGATGGCTGGCCTAGGAACCAAC
AGGGTGGCGGCCGTGGTGAGCGCCGCGGCCGTGAGGGGTCACAATGCCGGCGGCGGCGCG
TTGGAAGGGATGGTGCTGGTTTACGACATCGCCGGCGGCAAGTGGAGCCGCGCGCCGGAC
CTGCCGCCCGGGTTCCGCCGCGCCGCGTGCGCCGGCGTCGAGTGCTGA

Peptide Sequence

PEP ID

Os11t0138700-01
PEP Infomation

pep chromosome:IRGSP-1.0:11:1801184:1802662:1 gene:Os11g0138700 transcript:Os11t0138700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 566 description:Kelch-type beta propeller domain containing protein. (Os11t0138700-01)
Sequence

MPAAESCHSRSLSWLVKSCIPADPARHIAVPVLCPTPQPPPPSSPPAPPISTLPDDLLLE
CLARVPRASLPPLPAVSRRFATLLASDAFLHLRRAHAHLRPSLLALSVSDNGCVPQALLR
FESSVPVLEVAPLPLPPTLLHCGGSVFAHARAVVLGRDVFLIGRGATLRVDALTGAARAC
APTLFPRKKFAAAAVGDRIYVAGGSARTAAVEEYDPEVDAWRVVGEAPRRRYGCAGASAG
GVFYVAGGVAVSGEGARALEAHVCAGSVDALHVASGTWARPRALPGGGCVVGACGVGDHL
YVVASHAVELSFWRWSGATGRGGDGRGWGGWVALEAPPMPRGSVGLGMAVRVAMAGLGTN
RVAAVVSAAAVRGHNAGGGALEGMVLVYDIAGGKWSRAPDLPPGFRRAACAGVEC

Transcript Sequence

Transcript ID

Os11t0138700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:11:1801184:1802662:1 gene:Os11g0138700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 566 description:Kelch-type beta propeller domain containing protein. (Os11t0138700-01)
Sequence

ATGCCCAATCACAACCCACCGCACGCAGCAGCAGCTGCCCGCCTGAGCTGAGCTCCCAAT
CCGGCAATCCGCCATGCCCGCCGCCGAGAGCTGCCACTCCCGCAGCCTCTCGTGGCTCGT
CAAGTCCTGCATCCCCGCCGACCCCGCCCGCCACATCGCCGTCCCCGTTCTTTGCCCCAC
CCCGCAACCGCCGCCTCCCTCGTCGCCGCCGGCACCCCCAATCTCCACCCTCCCCGACGA
CCTCCTCCTCGAGTGCCTCGCCCGCGTCCCCCGCGCCTCCCTCCCTCCGCTCCCCGCCGT
CTCCCGCCGCTTCGCCACGCTCCTCGCCTCCGACGCCTTCCTCCACCTCCGCCGCGCCCA
CGCCCACCTCCGCCCCTCCCTCCTCGCCCTCTCCGTCTCCGACAACGGTTGCGTCCCGCA
GGCGCTGCTCCGGTTTGAATCCTCCGTGCCCGTGCTCGAGGTCGCCCCGCTGCCGTTGCC
CCCGACCCTGCTGCATTGCGGCGGCTCTGTGTTCGCGCATGCCCGCGCGGTCGTGCTGGG
ACGGGATGTCTTCCTCATCGGCCGCGGGGCGACGCTGCGCGTCGACGCGCTCACCGGCGC
CGCCCGCGCGTGCGCACCCACGCTCTTCCCGCGGAAGAAGTTCGCCGCGGCCGCCGTGGG
TGATCGGATCTACGTCGCCGGCGGATCCGCGCGCACCGCGGCGGTCGAGGAGTACGACCC
GGAGGTCGACGCGTGGCGCGTGGTCGGCGAGGCCCCGCGGCGGAGGTACGGGTGCGCCGG
CGCGAGTGCGGGAGGCGTGTTCTACGTCGCCGGGGGCGTCGCGGTGTCCGGCGAGGGCGC
GCGGGCGCTCGAGGCGCACGTGTGCGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGG
CACCTGGGCGCGCCCCCGTGCGCTCCCCGGCGGCGGCTGTGTCGTGGGGGCGTGCGGCGT
CGGTGACCACCTGTACGTAGTAGCCAGCCACGCGGTGGAGCTCTCCTTCTGGAGGTGGTC
CGGCGCCACCGGCCGTGGCGGTGACGGCAGAGGCTGGGGCGGGTGGGTGGCGCTCGAGGC
GCCGCCGATGCCGAGGGGGTCGGTGGGGCTCGGCATGGCGGTGCGCGTGGCGATGGCTGG
CCTAGGAACCAACAGGGTGGCGGCCGTGGTGAGCGCCGCGGCCGTGAGGGGTCACAATGC
CGGCGGCGGCGCGTTGGAAGGGATGGTGCTGGTTTACGACATCGCCGGCGGCAAGTGGAG
CCGCGCGCCGGACCTGCCGCCCGGGTTCCGCCGCGCCGCGTGCGCCGGCGTCGAGTGCTG
AGAATGTTGGTAGATGTGGTCCCCGTAGTTCAGTGAGATTCGTACTATTTGGTGGATGGA
CAGCTTGGTGCAATGTCAAGTAACATGGCGCCATCGTGGGATTGTTTGTTGAACAGCAAC
TTGATTGGTTGCCACAAAATTTCTCCAGTTGTTATTTAG